RNA–Protein interactions for RNA: ENST00000481754.1

GPN1-208, Transcript of GPN-loop GTPase 1, human

TSL 4

Gene GPN1, Length 537 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPN1-208	ENST00000481754	MRS2	Q9HD23	443 aa		14.06	□□□□□ -0.16
GPN1-208	ENST00000481754	LTV1	Q96GA3	475 aa	Predicted RBP	14.05	□□□□□ -0.16
GPN1-208	ENST00000481754	BTG4	Q9NY30	223 aa		14.05	□□□□□ -0.16
GPN1-208	ENST00000481754	INSR	P06213	1382 aa		14.05	□□□□□ -0.16
GPN1-208	ENST00000481754	NFAT5	O94916	1531 aa		14.05	□□□□□ -0.16
GPN1-208	ENST00000481754	SHPRH	Q149N8	1683 aa		14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	USP54	Q70EL1	1684 aa		14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	ANKRD24	Q8TF21	1146 aa		14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	AXIN2	Q9Y2T1	843 aa		14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	BLM	P54132	1417 aa	Predicted RBP	14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	SMG6	Q86US8	1419 aa	Known RBP	14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	ANKRD26	Q9UPS8	1709 aa		14.04	□□□□□ -0.16
GPN1-208	ENST00000481754	WDR43	Q15061	677 aa	Known RBP eCLIP	14.03	□□□□□ -0.16
GPN1-208	ENST00000481754	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.02	□□□□□ -0.16
GPN1-208	ENST00000481754	U2SURP	O15042	1029 aa	Known RBP	14.02	□□□□□ -0.17
GPN1-208	ENST00000481754	EIF4A2	Q14240	407 aa	Known RBP	14.02	□□□□□ -0.17
GPN1-208	ENST00000481754	STRN4	Q9NRL3	753 aa		14.02	□□□□□ -0.17
GPN1-208	ENST00000481754	IL13	P35225	146 aa		14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	TOM1L2	Q6ZVM7	507 aa		14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	UNC5CL	Q8IV45	518 aa		14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	FNBP4	Q8N3X1	1017 aa	Predicted RBP	14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	NLRP2	Q9NX02	1062 aa		14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	USP21	Q9UK80	565 aa		14.01	□□□□□ -0.17
GPN1-208	ENST00000481754	ERBB3	P21860	1342 aa		14	□□□□□ -0.17
GPN1-208	ENST00000481754	U2AF1L5	P0DN76	240 aa	Predicted RBP	14	□□□□□ -0.17
GPN1-208	ENST00000481754	U2AF1	Q01081	240 aa	Known RBP eCLIP	14	□□□□□ -0.17
GPN1-208	ENST00000481754	PNN	Q9H307	717 aa	Known RBP	14	□□□□□ -0.17
GPN1-208	ENST00000481754	PHRF1	Q9P1Y6	1649 aa	Known RBP	14	□□□□□ -0.17
GPN1-208	ENST00000481754	WDR17	Q8IZU2	1322 aa		13.99	□□□□□ -0.17
GPN1-208	ENST00000481754	CCDC9	Q9Y3X0	531 aa	Known RBP	13.99	□□□□□ -0.17
GPN1-208	ENST00000481754	ABCC6	O95255	1503 aa		13.99	□□□□□ -0.17
GPN1-208	ENST00000481754	MARF1	Q9Y4F3	1742 aa	Known RBP	13.98	□□□□□ -0.17
GPN1-208	ENST00000481754	NEFM	P07197	916 aa		13.98	□□□□□ -0.17
GPN1-208	ENST00000481754	CCDC184	Q52MB2	194 aa		13.98	□□□□□ -0.17
GPN1-208	ENST00000481754	ZNF772	Q68DY9	489 aa	Predicted RBP	13.98	□□□□□ -0.17
GPN1-208	ENST00000481754	LARP1	Q6PKG0	1096 aa	Known RBP	13.98	□□□□□ -0.17
GPN1-208	ENST00000481754	LRP6	O75581	1613 aa		13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	AFF2	P51816	1311 aa		13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	PNISR	Q8TF01	805 aa	Known RBP	13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	EYA1	Q99502	592 aa		13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	PHF23	Q9BUL5	403 aa	Predicted RBP	13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	CARD10	Q9BWT7	1032 aa		13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	MAP2	P11137	1827 aa	Known RBP	13.97	□□□□□ -0.17
GPN1-208	ENST00000481754	FCHSD2	O94868	740 aa		13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	NBPF6	Q5VWK0	638 aa		13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	SULT6B1	Q6IMI4	303 aa		13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	FAM9B	Q8IZU0	186 aa		13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	NBPF4	Q96M43	638 aa		13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	TRPC5	Q9UL62	973 aa	Predicted RBP	13.96	□□□□□ -0.17
GPN1-208	ENST00000481754	CRYBG1	Q9Y4K1	1723 aa		13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	CAMTA1	Q9Y6Y1	1673 aa		13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	COL5A2	P05997	1499 aa	Predicted RBP	13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	VPS72	Q15906	364 aa		13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	USP35	Q9P2H5	1018 aa		13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	COL14A1	Q05707	1796 aa	Known RBP	13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	SLIT2	O94813	1529 aa		13.95	□□□□□ -0.18
GPN1-208	ENST00000481754	HMOX1	P09601	288 aa		13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	TCP11L2	Q8N4U5	519 aa		13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	RAPGEF4	Q8WZA2	1011 aa		13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	ABCA3	Q99758	1704 aa		13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	QTRT2	Q9H974	415 aa	Known RBP	13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	ADAMTS8	Q9UP79	889 aa		13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	THRAP3	Q9Y2W1	955 aa	Known RBP	13.94	□□□□□ -0.18
GPN1-208	ENST00000481754	IGSF1	Q8N6C5	1336 aa		13.93	□□□□□ -0.18
GPN1-208	ENST00000481754	CRB1	P82279	1406 aa		13.93	□□□□□ -0.18
GPN1-208	ENST00000481754	LTN1	O94822	1766 aa		13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	TAT	P17735	454 aa	Predicted RBP	13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	USHBP1	Q8N6Y0	703 aa		13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	PEAK1	Q9H792	1746 aa		13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	COL3A1	P02461	1466 aa	Predicted RBP	13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	BCL9L	Q86UU0	1499 aa		13.92	□□□□□ -0.18
GPN1-208	ENST00000481754	SPATA31A1	Q5TZJ5	1347 aa		13.91	□□□□□ -0.18
GPN1-208	ENST00000481754	SPATA31A5	Q5VU36	1347 aa		13.91	□□□□□ -0.18
GPN1-208	ENST00000481754	SPATA31A7	Q8IWB4	1347 aa		13.91	□□□□□ -0.18
GPN1-208	ENST00000481754	MAPK8IP3	Q9UPT6	1336 aa		13.91	□□□□□ -0.18
GPN1-208	ENST00000481754	GJD4	Q96KN9	370 aa	Predicted RBP	13.91	□□□□□ -0.18
GPN1-208	ENST00000481754	IL2RB	P14784	551 aa		13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	PRKAR2B	P31323	418 aa		13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	AMOT	Q4VCS5	1084 aa		13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	AEBP1	Q8IUX7	1158 aa		13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	COL18A1	P39060	1754 aa		13.9	□□□□□ -0.18
GPN1-208	ENST00000481754	LMO7	Q8WWI1	1683 aa		13.89	□□□□□ -0.19
GPN1-208	ENST00000481754	BARGIN	Q6ZT62	677 aa		13.89	□□□□□ -0.19
GPN1-208	ENST00000481754	RUNDC1	Q96C34	613 aa		13.89	□□□□□ -0.19
GPN1-208	ENST00000481754	RSPH6A	Q9H0K4	717 aa		13.89	□□□□□ -0.19
GPN1-208	ENST00000481754	KDR	P35968	1356 aa		13.88	□□□□□ -0.19
GPN1-208	ENST00000481754		A0A0G2JS52	829 aa		13.88	□□□□□ -0.19
GPN1-208	ENST00000481754	RBM6	P78332	1123 aa	Known RBP	13.88	□□□□□ -0.19
GPN1-208	ENST00000481754	MYT1	Q01538	1121 aa		13.88	□□□□□ -0.19
GPN1-208	ENST00000481754	SPG7	Q9UQ90	795 aa		13.88	□□□□□ -0.19
GPN1-208	ENST00000481754	EXOC5	O00471	708 aa		13.87	□□□□□ -0.19
GPN1-208	ENST00000481754	RXRB	P28702	533 aa		13.87	□□□□□ -0.19
GPN1-208	ENST00000481754	CCDC146	Q8IYE0	955 aa		13.87	□□□□□ -0.19
GPN1-208	ENST00000481754	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
GPN1-208	ENST00000481754	NWD2	Q9ULI1	1742 aa		13.87	□□□□□ -0.19
GPN1-208	ENST00000481754	FAM98C	Q17RN3	349 aa	Known RBP	13.86	□□□□□ -0.19
GPN1-208	ENST00000481754	GAS2L2	Q8NHY3	880 aa		13.86	□□□□□ -0.19
GPN1-208	ENST00000481754	ZCRB1	Q8TBF4	217 aa	Known RBP	13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms