RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 MTHFSP49914 203 aa25.96■■□□□ 1.75
KCNMA1-220ENST00000481070 MAP3K19Q56UN5 1328 aa25.95■■□□□ 1.75
KCNMA1-220ENST00000481070 AATKQ6ZMQ8 1374 aa25.95■■□□□ 1.74
KCNMA1-220ENST00000481070 ADAMTS2O95450 1211 aa25.93■■□□□ 1.74
KCNMA1-220ENST00000481070 AMPHP49418 695 aa25.93■■□□□ 1.74
KCNMA1-220ENST00000481070 CCDC184Q52MB2 194 aa25.93■■□□□ 1.74
KCNMA1-220ENST00000481070 LTN1O94822 1766 aa25.92■■□□□ 1.74
KCNMA1-220ENST00000481070 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
KCNMA1-220ENST00000481070 KIAA0232Q92628 1395 aa25.92■■□□□ 1.74
KCNMA1-220ENST00000481070 ARHGEF25Q86VW2 580 aa25.91■■□□□ 1.74
KCNMA1-220ENST00000481070 PEAK1Q9H792 1746 aa25.9■■□□□ 1.74
KCNMA1-220ENST00000481070 PRDM11Q9NQV5 511 aa25.89■■□□□ 1.74
KCNMA1-220ENST00000481070 LRP5O75197 1615 aa25.88■■□□□ 1.73
KCNMA1-220ENST00000481070 HOXC9P31274 260 aa25.86■■□□□ 1.73
KCNMA1-220ENST00000481070 HSP90AB2PQ58FF8 381 aa25.86■■□□□ 1.73
KCNMA1-220ENST00000481070 MRS2Q9HD23 443 aa25.86■■□□□ 1.73
KCNMA1-220ENST00000481070 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
KCNMA1-220ENST00000481070 ATRNO75882 1429 aa25.85■■□□□ 1.73
KCNMA1-220ENST00000481070 SMG6Q86US8 1419 aaKnown RBP25.85■■□□□ 1.73
KCNMA1-220ENST00000481070 CPDO75976 1380 aa25.84■■□□□ 1.73
KCNMA1-220ENST00000481070 FAM83GA6ND36 823 aa25.84■■□□□ 1.73
KCNMA1-220ENST00000481070 CCDC125Q86Z20 511 aa25.84■■□□□ 1.73
KCNMA1-220ENST00000481070 IP6K1Q92551 441 aa25.84■■□□□ 1.73
KCNMA1-220ENST00000481070 CFAP53Q96M91 514 aa25.84■■□□□ 1.73
KCNMA1-220ENST00000481070 FLT4P35916 1363 aa25.83■■□□□ 1.73
KCNMA1-220ENST00000481070 TRPC5Q9UL62 973 aaPredicted RBP25.83■■□□□ 1.73
KCNMA1-220ENST00000481070 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
KCNMA1-220ENST00000481070 USP21Q9UK80 565 aa25.81■■□□□ 1.72
KCNMA1-220ENST00000481070 RGPD5Q99666 1765 aa25.81■■□□□ 1.72
KCNMA1-220ENST00000481070 CCER2I3L3R5 266 aa25.8■■□□□ 1.72
KCNMA1-220ENST00000481070 RTL1A6NKG5 1358 aa25.8■■□□□ 1.72
KCNMA1-220ENST00000481070 COL18A1P39060 1754 aa25.79■■□□□ 1.72
KCNMA1-220ENST00000481070 DIAPH1O60610 1272 aaKnown RBP25.78■■□□□ 1.72
KCNMA1-220ENST00000481070 EIF4A2Q14240 407 aaKnown RBP25.77■■□□□ 1.72
KCNMA1-220ENST00000481070 FNBP4Q8N3X1 1017 aaPredicted RBP25.77■■□□□ 1.72
KCNMA1-220ENST00000481070 BTG4Q9NY30 223 aa25.77■■□□□ 1.72
KCNMA1-220ENST00000481070 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
KCNMA1-220ENST00000481070 COL3A1P02461 1466 aaPredicted RBP25.77■■□□□ 1.72
KCNMA1-220ENST00000481070 ANKRD24Q8TF21 1146 aa25.76■■□□□ 1.71
KCNMA1-220ENST00000481070 INSRP06213 1382 aa25.76■■□□□ 1.71
KCNMA1-220ENST00000481070 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
KCNMA1-220ENST00000481070 CAMTA1Q9Y6Y1 1673 aa25.75■■□□□ 1.71
KCNMA1-220ENST00000481070 U2SURPO15042 1029 aaKnown RBP25.75■■□□□ 1.71
KCNMA1-220ENST00000481070 STRN4Q9NRL3 753 aa25.75■■□□□ 1.71
KCNMA1-220ENST00000481070 CSB-PGBD3P0DP91 1061 aa25.74■■□□□ 1.71
KCNMA1-220ENST00000481070 IL13P35225 146 aa25.74■■□□□ 1.71
KCNMA1-220ENST00000481070 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.74■■□□□ 1.71
KCNMA1-220ENST00000481070 LMO7Q8WWI1 1683 aa25.74■■□□□ 1.71
KCNMA1-220ENST00000481070 BLMP54132 1417 aaPredicted RBP25.73■■□□□ 1.71
KCNMA1-220ENST00000481070 EVA1CP58658 441 aa25.73■■□□□ 1.71
KCNMA1-220ENST00000481070 PLCH1Q4KWH8 1693 aa25.72■■□□□ 1.71
KCNMA1-220ENST00000481070 FAM9BQ8IZU0 186 aa25.72■■□□□ 1.71
KCNMA1-220ENST00000481070 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.7
KCNMA1-220ENST00000481070 NUDCQ9Y266 331 aa25.7■■□□□ 1.7
KCNMA1-220ENST00000481070 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.7
KCNMA1-220ENST00000481070 ABCC6O95255 1503 aa25.69■■□□□ 1.7
KCNMA1-220ENST00000481070 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
KCNMA1-220ENST00000481070 PNISRQ8TF01 805 aaKnown RBP25.69■■□□□ 1.7
KCNMA1-220ENST00000481070 ERBB3P21860 1342 aa25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 COL5A2P05997 1499 aaPredicted RBP25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 BCL9LQ86UU0 1499 aa25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 U2AF1L5P0DN76 240 aaPredicted RBP25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 U2AF1Q01081 240 aaKnown RBP eCLIP25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
KCNMA1-220ENST00000481070 LARP1Q6PKG0 1096 aaKnown RBP25.67■■□□□ 1.7
KCNMA1-220ENST00000481070 EYA1Q99502 592 aa25.67■■□□□ 1.7
KCNMA1-220ENST00000481070 NLRP2Q9NX02 1062 aa25.67■■□□□ 1.7
KCNMA1-220ENST00000481070 HMOX1P09601 288 aa25.66■■□□□ 1.7
KCNMA1-220ENST00000481070 NBPF6Q5VWK0 638 aa25.66■■□□□ 1.7
KCNMA1-220ENST00000481070 NBPF4Q96M43 638 aa25.66■■□□□ 1.7
KCNMA1-220ENST00000481070 SLIT2O94813 1529 aa25.65■■□□□ 1.7
KCNMA1-220ENST00000481070 TOM1L2Q6ZVM7 507 aa25.65■■□□□ 1.7
KCNMA1-220ENST00000481070 ADAMTS8Q9UP79 889 aa25.65■■□□□ 1.7
KCNMA1-220ENST00000481070 WDR17Q8IZU2 1322 aa25.63■■□□□ 1.69
KCNMA1-220ENST00000481070 AEBP1Q8IUX7 1158 aa25.63■■□□□ 1.69
KCNMA1-220ENST00000481070 USP35Q9P2H5 1018 aa25.63■■□□□ 1.69
KCNMA1-220ENST00000481070 NRAPQ86VF7 1730 aa25.63■■□□□ 1.69
KCNMA1-220ENST00000481070 GLI3P10071 1580 aa25.62■■□□□ 1.69
KCNMA1-220ENST00000481070 SULT6B1Q6IMI4 303 aa25.62■■□□□ 1.69
KCNMA1-220ENST00000481070 NWD2Q9ULI1 1742 aa25.61■■□□□ 1.69
KCNMA1-220ENST00000481070 UNC5CLQ8IV45 518 aa25.61■■□□□ 1.69
KCNMA1-220ENST00000481070 CCDC9Q9Y3X0 531 aaKnown RBP25.61■■□□□ 1.69
KCNMA1-220ENST00000481070 RGPD1P0DJD0 1748 aa25.6■■□□□ 1.69
KCNMA1-220ENST00000481070 CCDC146Q8IYE0 955 aa25.6■■□□□ 1.69
KCNMA1-220ENST00000481070 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
KCNMA1-220ENST00000481070 SENP3-EIF4A1A0A087X0R7 540 aa25.59■■□□□ 1.69
KCNMA1-220ENST00000481070 GJD4Q96KN9 370 aaPredicted RBP25.59■■□□□ 1.69
KCNMA1-220ENST00000481070 FAM208AQ9UK61 1670 aaKnown RBP25.57■■□□□ 1.68
KCNMA1-220ENST00000481070 CRB1P82279 1406 aa25.56■■□□□ 1.68
KCNMA1-220ENST00000481070 DEFB132Q7Z7B7 95 aa25.56■■□□□ 1.68
KCNMA1-220ENST00000481070 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
KCNMA1-220ENST00000481070 CARD10Q9BWT7 1032 aa25.55■■□□□ 1.68
KCNMA1-220ENST00000481070 RSPH6AQ9H0K4 717 aa25.55■■□□□ 1.68
KCNMA1-220ENST00000481070 FCHSD2O94868 740 aa25.52■■□□□ 1.68
KCNMA1-220ENST00000481070 VPS72Q15906 364 aa25.52■■□□□ 1.68
KCNMA1-220ENST00000481070 SF3B2Q13435 895 aaKnown RBP25.5■■□□□ 1.67
KCNMA1-220ENST00000481070 SPATA31A1Q5TZJ5 1347 aa25.5■■□□□ 1.67
KCNMA1-220ENST00000481070 SPATA31A5Q5VU36 1347 aa25.5■■□□□ 1.67
KCNMA1-220ENST00000481070 SPATA31A7Q8IWB4 1347 aa25.5■■□□□ 1.67
KCNMA1-220ENST00000481070 KDRP35968 1356 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms