RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 BCL9O00512 1426 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 ZBTB7AO95365 584 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 USP6P35125 1406 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 COL18A1P39060 1754 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 NLRP6P59044 892 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 TOM1L2Q6ZVM7 507 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 KIAA1210Q9ULL0 1709 aa10.2□□□□□ -0.78
COL17A1-205ENST00000480127 WDR17Q8IZU2 1322 aa10.19□□□□□ -0.78
COL17A1-205ENST00000480127 CABP1Q9NZU7 370 aa10.19□□□□□ -0.78
COL17A1-205ENST00000480127 MYOM1P52179 1685 aa10.18□□□□□ -0.78
COL17A1-205ENST00000480127 CENPJQ9HC77 1338 aaPredicted RBP10.18□□□□□ -0.78
COL17A1-205ENST00000480127 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
COL17A1-205ENST00000480127 ZNF784Q8NCA9 323 aaPredicted RBP10.18□□□□□ -0.78
COL17A1-205ENST00000480127 ATF5Q9Y2D1 282 aaPredicted RBP10.18□□□□□ -0.78
COL17A1-205ENST00000480127 WNK3Q9BYP7 1800 aa10.17□□□□□ -0.78
COL17A1-205ENST00000480127 SLC15A2Q16348 729 aa10.17□□□□□ -0.78
COL17A1-205ENST00000480127 ARHGEF25Q86VW2 580 aa10.17□□□□□ -0.78
COL17A1-205ENST00000480127 CDCA7Q9BWT1 371 aaPredicted RBP10.17□□□□□ -0.78
COL17A1-205ENST00000480127 PIK3C2AO00443 1686 aa10.17□□□□□ -0.78
COL17A1-205ENST00000480127 CPSF1Q10570 1443 aaKnown RBP10.16□□□□□ -0.78
COL17A1-205ENST00000480127 SGIP1Q9BQI5 828 aa10.16□□□□□ -0.78
COL17A1-205ENST00000480127 SYT17Q9BSW7 474 aa10.16□□□□□ -0.78
COL17A1-205ENST00000480127 CARD10Q9BWT7 1032 aa10.16□□□□□ -0.78
COL17A1-205ENST00000480127 FHDC1Q9C0D6 1143 aaPredicted RBP10.16□□□□□ -0.78
COL17A1-205ENST00000480127 STK32BQ9NY57 414 aa10.16□□□□□ -0.78
COL17A1-205ENST00000480127 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
COL17A1-205ENST00000480127 QRICH2Q9H0J4 1663 aa10.15□□□□□ -0.79
COL17A1-205ENST00000480127 AKAP12Q02952 1782 aa10.14□□□□□ -0.79
COL17A1-205ENST00000480127 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
COL17A1-205ENST00000480127 EXOC5O00471 708 aa10.14□□□□□ -0.79
COL17A1-205ENST00000480127 KCNH5Q8NCM2 988 aa10.14□□□□□ -0.79
COL17A1-205ENST00000480127 MTFR1LQ9H019 292 aa10.14□□□□□ -0.79
COL17A1-205ENST00000480127 CSB-PGBD3P0DP91 1061 aa10.13□□□□□ -0.79
COL17A1-205ENST00000480127 NFAT5O94916 1531 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 RGPD5Q99666 1765 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 SOX12O15370 315 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-205ENST00000480127 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 CCDC7Q96M83 1385 aa10.12□□□□□ -0.79
COL17A1-205ENST00000480127 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 EVC2Q86UK5 1308 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 ACSBG1Q96GR2 724 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 ARXQ96QS3 562 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 NHSQ6T4R5 1651 aa10.11□□□□□ -0.79
COL17A1-205ENST00000480127 C1QTNF8P60827 252 aa10.1□□□□□ -0.79
COL17A1-205ENST00000480127 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
COL17A1-205ENST00000480127 ABCC6O95255 1503 aa10.09□□□□□ -0.79
COL17A1-205ENST00000480127 SENP3-EIF4A1A0A087X0R7 540 aa10.09□□□□□ -0.79
COL17A1-205ENST00000480127 ZNF827Q17R98 1081 aa10.09□□□□□ -0.79
COL17A1-205ENST00000480127 LRRC4BQ9NT99 713 aa10.09□□□□□ -0.79
COL17A1-205ENST00000480127 ERBB3P21860 1342 aa10.08□□□□□ -0.8
COL17A1-205ENST00000480127 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
COL17A1-205ENST00000480127 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
COL17A1-205ENST00000480127 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
COL17A1-205ENST00000480127 IL2RBP14784 551 aa10.07□□□□□ -0.8
COL17A1-205ENST00000480127 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
COL17A1-205ENST00000480127 AKT1S1Q96B36 256 aa10.07□□□□□ -0.8
COL17A1-205ENST00000480127 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
COL17A1-205ENST00000480127 CHD4Q14839 1912 aa10.06□□□□□ -0.8
COL17A1-205ENST00000480127 BTAF1O14981 1849 aa10.05□□□□□ -0.8
COL17A1-205ENST00000480127 GPR162Q16538 588 aa10.05□□□□□ -0.8
COL17A1-205ENST00000480127 NME9Q86XW9 330 aa10.05□□□□□ -0.8
COL17A1-205ENST00000480127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL17A1-205ENST00000480127 ANKRD24Q8TF21 1146 aa10.05□□□□□ -0.8
COL17A1-205ENST00000480127 USP54Q70EL1 1684 aa10.05□□□□□ -0.8
COL17A1-205ENST00000480127 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 SIN3AQ96ST3 1273 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 COL24A1Q17RW2 1714 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 UTRNP46939 3433 aa10.04□□□□□ -0.8
COL17A1-205ENST00000480127 TONSLQ96HA7 1378 aa10.03□□□□□ -0.8
COL17A1-205ENST00000480127 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
COL17A1-205ENST00000480127 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
COL17A1-205ENST00000480127 GIGYF1O75420 1035 aaPredicted RBP10.02□□□□□ -0.81
COL17A1-205ENST00000480127 POLD1P28340 1107 aa10.02□□□□□ -0.81
COL17A1-205ENST00000480127 KCNQ4P56696 695 aa10.02□□□□□ -0.81
COL17A1-205ENST00000480127 KLHL34Q8N239 644 aa10.02□□□□□ -0.81
COL17A1-205ENST00000480127 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
COL17A1-205ENST00000480127 LTN1O94822 1766 aa10.01□□□□□ -0.81
COL17A1-205ENST00000480127 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
COL17A1-205ENST00000480127 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
COL17A1-205ENST00000480127 CARD11Q9BXL7 1154 aa10.01□□□□□ -0.81
COL17A1-205ENST00000480127 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
COL17A1-205ENST00000480127 NSD2O96028 1365 aa10.01□□□□□ -0.81
COL17A1-205ENST00000480127 PRIM1P49642 420 aaKnown RBP10□□□□□ -0.81
COL17A1-205ENST00000480127 IFFO2Q5TF58 517 aa10□□□□□ -0.81
COL17A1-205ENST00000480127 PELP1Q8IZL8 1130 aaKnown RBP10□□□□□ -0.81
COL17A1-205ENST00000480127 IP6K1Q92551 441 aa10□□□□□ -0.81
COL17A1-205ENST00000480127 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
COL17A1-205ENST00000480127 TFCP2L1Q9NZI6 479 aa10□□□□□ -0.81
COL17A1-205ENST00000480127 ANKRD36BQ8N2N9 1353 aa10□□□□□ -0.81
COL17A1-205ENST00000480127 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
COL17A1-205ENST00000480127 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
COL17A1-205ENST00000480127 YBX3P16989 372 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL17A1-205ENST00000480127 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms