RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
SMURF1-204ENST00000480055 CPDO75976 1380 aa15.11■□□□□ 0.01
SMURF1-204ENST00000480055 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
SMURF1-204ENST00000480055 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
SMURF1-204ENST00000480055 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
SMURF1-204ENST00000480055 YY1P25490 414 aa15.09■□□□□ 0.01
SMURF1-204ENST00000480055 MIER1Q8N108 512 aa15.09■□□□□ 0.01
SMURF1-204ENST00000480055 USP35Q9P2H5 1018 aa15.09■□□□□ 0.01
SMURF1-204ENST00000480055 USP19O94966 1318 aa15.09■□□□□ 0.01
SMURF1-204ENST00000480055 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
SMURF1-204ENST00000480055 COL18A1P39060 1754 aa15.08■□□□□ 0.01
SMURF1-204ENST00000480055 RGPD5Q99666 1765 aa15.08■□□□□ 0.01
SMURF1-204ENST00000480055 CHD4Q14839 1912 aa15.08■□□□□ 0
SMURF1-204ENST00000480055 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
SMURF1-204ENST00000480055 PDE3BQ13370 1112 aa15.08■□□□□ 0
SMURF1-204ENST00000480055 MYOM1P52179 1685 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 NBPF14Q5TI25 921 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 STAC3Q96MF2 364 aa15.07■□□□□ 0
SMURF1-204ENST00000480055 LARP1Q6PKG0 1096 aaKnown RBP15.06■□□□□ 0
SMURF1-204ENST00000480055 ACEP12821 1306 aa15.06■□□□□ 0
SMURF1-204ENST00000480055 OVOS2A0A0G2JMS6 1433 aa15.06■□□□□ 0
SMURF1-204ENST00000480055 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
SMURF1-204ENST00000480055 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
SMURF1-204ENST00000480055 EVA1CP58658 441 aa15.05■□□□□ -0
SMURF1-204ENST00000480055 SPON1Q9HCB6 807 aa15.05■□□□□ -0
SMURF1-204ENST00000480055 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
SMURF1-204ENST00000480055 SLIT3O75094 1523 aa15.05■□□□□ -0
SMURF1-204ENST00000480055 PIK3C2AO00443 1686 aa15.05■□□□□ -0
SMURF1-204ENST00000480055 CRB1P82279 1406 aa15.04■□□□□ -0
SMURF1-204ENST00000480055 CDK19Q9BWU1 502 aa15.04■□□□□ -0
SMURF1-204ENST00000480055 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
SMURF1-204ENST00000480055 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
SMURF1-204ENST00000480055 KCNQ2O43526 872 aa15.03■□□□□ -0
SMURF1-204ENST00000480055 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
SMURF1-204ENST00000480055 ABTB2Q8N961 1025 aa15.02■□□□□ -0
SMURF1-204ENST00000480055 PPP1R1BQ9UD71 204 aaPredicted RBP15.02■□□□□ -0
SMURF1-204ENST00000480055 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
SMURF1-204ENST00000480055 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
SMURF1-204ENST00000480055 GCP02774 474 aa14.99□□□□□ -0.01
SMURF1-204ENST00000480055 NLRP13Q86W25 1043 aa14.99□□□□□ -0.01
SMURF1-204ENST00000480055 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
SMURF1-204ENST00000480055 PLSCR1O15162 318 aa14.98□□□□□ -0.01
SMURF1-204ENST00000480055 BCL9O00512 1426 aa14.98□□□□□ -0.01
SMURF1-204ENST00000480055 AATKQ6ZMQ8 1374 aa14.98□□□□□ -0.01
SMURF1-204ENST00000480055 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
SMURF1-204ENST00000480055 USP6P35125 1406 aa14.97□□□□□ -0.01
SMURF1-204ENST00000480055 TRPM1Q7Z4N2 1603 aa14.96□□□□□ -0.01
SMURF1-204ENST00000480055 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.01
SMURF1-204ENST00000480055 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.01
SMURF1-204ENST00000480055 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
SMURF1-204ENST00000480055 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMURF1-204ENST00000480055 CPSF1Q10570 1443 aaKnown RBP14.94□□□□□ -0.02
SMURF1-204ENST00000480055 DDB1Q16531 1140 aa14.94□□□□□ -0.02
SMURF1-204ENST00000480055 KLHL34Q8N239 644 aa14.94□□□□□ -0.02
SMURF1-204ENST00000480055 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
SMURF1-204ENST00000480055 QSER1Q2KHR3 1735 aa14.94□□□□□ -0.02
SMURF1-204ENST00000480055 BTAF1O14981 1849 aa14.94□□□□□ -0.02
SMURF1-204ENST00000480055 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
SMURF1-204ENST00000480055 ABCC6O95255 1503 aa14.93□□□□□ -0.02
SMURF1-204ENST00000480055 MON2Q7Z3U7 1717 aa14.93□□□□□ -0.02
SMURF1-204ENST00000480055 LTN1O94822 1766 aa14.93□□□□□ -0.02
SMURF1-204ENST00000480055 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
SMURF1-204ENST00000480055 NBPF1Q3BBV0 1214 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 PIP4P2Q8N4L2 257 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
SMURF1-204ENST00000480055 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 CREBZFQ9NS37 354 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 KAT6BQ8WYB5 2073 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 COL24A1Q17RW2 1714 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 NFAT5O94916 1531 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 WDR17Q8IZU2 1322 aa14.92□□□□□ -0.02
SMURF1-204ENST00000480055 PTGER2P43116 358 aa14.91□□□□□ -0.02
SMURF1-204ENST00000480055 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
SMURF1-204ENST00000480055 CENPJQ9HC77 1338 aaPredicted RBP14.91□□□□□ -0.02
SMURF1-204ENST00000480055 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
SMURF1-204ENST00000480055 TOM1L2Q6ZVM7 507 aa14.9□□□□□ -0.02
SMURF1-204ENST00000480055 MARCH10Q8NA82 808 aaPredicted RBP14.9□□□□□ -0.02
SMURF1-204ENST00000480055 CDCA7Q9BWT1 371 aaPredicted RBP14.9□□□□□ -0.02
SMURF1-204ENST00000480055 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
SMURF1-204ENST00000480055 TNS2Q63HR2 1409 aa14.9□□□□□ -0.02
SMURF1-204ENST00000480055 ZBTB7AO95365 584 aa14.89□□□□□ -0.03
SMURF1-204ENST00000480055 NLRP6P59044 892 aa14.89□□□□□ -0.03
SMURF1-204ENST00000480055 AXIN2Q9Y2T1 843 aa14.88□□□□□ -0.03
SMURF1-204ENST00000480055 UTRNP46939 3433 aa14.88□□□□□ -0.03
SMURF1-204ENST00000480055 ZNF784Q8NCA9 323 aaPredicted RBP14.87□□□□□ -0.03
SMURF1-204ENST00000480055 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
SMURF1-204ENST00000480055 TXNRD1Q16881 649 aa14.86□□□□□ -0.03
SMURF1-204ENST00000480055 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
SMURF1-204ENST00000480055 SLC15A2Q16348 729 aa14.85□□□□□ -0.03
SMURF1-204ENST00000480055 ARHGEF25Q86VW2 580 aa14.85□□□□□ -0.03
SMURF1-204ENST00000480055 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SMURF1-204ENST00000480055 SGIP1Q9BQI5 828 aa14.85□□□□□ -0.03
SMURF1-204ENST00000480055 CARD10Q9BWT7 1032 aa14.85□□□□□ -0.03
SMURF1-204ENST00000480055 FHDC1Q9C0D6 1143 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 222.4 ms