RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NRAPQ86VF7 1730 aa14.82□□□□□ -0.04
ATG4B-219ENST00000479941 AMER1Q5JTC6 1135 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-219ENST00000479941 COL5A2P05997 1499 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-219ENST00000479941 CDK12Q9NYV4 1490 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-219ENST00000479941 COL18A1P39060 1754 aa14.8□□□□□ -0.04
ATG4B-219ENST00000479941 IP6K1Q92551 441 aa14.8□□□□□ -0.04
ATG4B-219ENST00000479941 MAP3K19Q56UN5 1328 aa14.8□□□□□ -0.04
ATG4B-219ENST00000479941 SPATA31A5Q5VU36 1347 aa14.8□□□□□ -0.04
ATG4B-219ENST00000479941 SPATA31A7Q8IWB4 1347 aa14.8□□□□□ -0.04
ATG4B-219ENST00000479941 LTN1O94822 1766 aa14.79□□□□□ -0.04
ATG4B-219ENST00000479941 FBLN1P23142 703 aa14.79□□□□□ -0.04
ATG4B-219ENST00000479941 AMPHP49418 695 aa14.79□□□□□ -0.04
ATG4B-219ENST00000479941 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
ATG4B-219ENST00000479941 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-219ENST00000479941 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 SPATA31A1Q5TZJ5 1347 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 WDR17Q8IZU2 1322 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 LARP1Q6PKG0 1096 aaKnown RBP14.78□□□□□ -0.04
ATG4B-219ENST00000479941 MORC1Q86VD1 984 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
ATG4B-219ENST00000479941 GLI3P10071 1580 aa14.77□□□□□ -0.04
ATG4B-219ENST00000479941 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-219ENST00000479941 CSB-PGBD3P0DP91 1061 aa14.77□□□□□ -0.05
ATG4B-219ENST00000479941 HOXC9P31274 260 aa14.77□□□□□ -0.05
ATG4B-219ENST00000479941 CRB1P82279 1406 aa14.76□□□□□ -0.05
ATG4B-219ENST00000479941 ERBB3P21860 1342 aa14.76□□□□□ -0.05
ATG4B-219ENST00000479941 TOM1L2Q6ZVM7 507 aa14.76□□□□□ -0.05
ATG4B-219ENST00000479941 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
ATG4B-219ENST00000479941 FLT4P35916 1363 aa14.75□□□□□ -0.05
ATG4B-219ENST00000479941 TNNT2P45379 298 aaPredicted RBP14.75□□□□□ -0.05
ATG4B-219ENST00000479941 CC2D1BQ5T0F9 858 aaKnown RBP14.75□□□□□ -0.05
ATG4B-219ENST00000479941 ANKRD24Q8TF21 1146 aa14.75□□□□□ -0.05
ATG4B-219ENST00000479941 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
ATG4B-219ENST00000479941 EMILIN1Q9Y6C2 1016 aa14.75□□□□□ -0.05
ATG4B-219ENST00000479941 RGS12O14924 1447 aa14.75□□□□□ -0.05
ATG4B-219ENST00000479941 FAM98CQ17RN3 349 aaKnown RBP14.74□□□□□ -0.05
ATG4B-219ENST00000479941 BARGINQ6ZT62 677 aa14.74□□□□□ -0.05
ATG4B-219ENST00000479941 TCP11L2Q8N4U5 519 aa14.74□□□□□ -0.05
ATG4B-219ENST00000479941 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
ATG4B-219ENST00000479941 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
ATG4B-219ENST00000479941 RGPD5Q99666 1765 aa14.73□□□□□ -0.05
ATG4B-219ENST00000479941 SEPT12Q8IYM1 358 aa14.73□□□□□ -0.05
ATG4B-219ENST00000479941 INSRP06213 1382 aa14.73□□□□□ -0.05
ATG4B-219ENST00000479941 ZNF316A6NFI3 1004 aaPredicted RBP14.72□□□□□ -0.05
ATG4B-219ENST00000479941 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
ATG4B-219ENST00000479941 DDX10Q13206 875 aaKnown RBP14.72□□□□□ -0.05
ATG4B-219ENST00000479941 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
ATG4B-219ENST00000479941 NLRP2Q9NX02 1062 aa14.72□□□□□ -0.05
ATG4B-219ENST00000479941 A0A0G2JS52 829 aa14.71□□□□□ -0.05
ATG4B-219ENST00000479941 MYT1Q01538 1121 aa14.71□□□□□ -0.05
ATG4B-219ENST00000479941 LTV1Q96GA3 475 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-219ENST00000479941 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
ATG4B-219ENST00000479941 MAP2P11137 1827 aaKnown RBP14.71□□□□□ -0.06
ATG4B-219ENST00000479941 CDCA7Q9BWT1 371 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-219ENST00000479941 PEAK1Q9H792 1746 aa14.69□□□□□ -0.06
ATG4B-219ENST00000479941 CNGB1Q14028 1251 aaPredicted RBP14.69□□□□□ -0.06
ATG4B-219ENST00000479941 FAM208AQ9UK61 1670 aaKnown RBP14.68□□□□□ -0.06
ATG4B-219ENST00000479941 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
ATG4B-219ENST00000479941 EP400Q96L91 3159 aa14.67□□□□□ -0.06
ATG4B-219ENST00000479941 KRT27Q7Z3Y8 459 aa14.67□□□□□ -0.06
ATG4B-219ENST00000479941 SOCS7O14512 581 aa14.66□□□□□ -0.06
ATG4B-219ENST00000479941 NBPF6Q5VWK0 638 aa14.66□□□□□ -0.06
ATG4B-219ENST00000479941 NBPF4Q96M43 638 aa14.66□□□□□ -0.06
ATG4B-219ENST00000479941 IL2RBP14784 551 aa14.65□□□□□ -0.06
ATG4B-219ENST00000479941 MTHFSP49914 203 aa14.65□□□□□ -0.06
ATG4B-219ENST00000479941 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
ATG4B-219ENST00000479941 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
ATG4B-219ENST00000479941 EIF4A2Q14240 407 aaKnown RBP14.64□□□□□ -0.07
ATG4B-219ENST00000479941 DDB1Q16531 1140 aa14.64□□□□□ -0.07
ATG4B-219ENST00000479941 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
ATG4B-219ENST00000479941 EXOC5O00471 708 aa14.63□□□□□ -0.07
ATG4B-219ENST00000479941 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
ATG4B-219ENST00000479941 BRWD3Q6RI45 1802 aa14.62□□□□□ -0.07
ATG4B-219ENST00000479941 PPP2R1AP30153 589 aa14.62□□□□□ -0.07
ATG4B-219ENST00000479941 RALBP1Q15311 655 aa14.62□□□□□ -0.07
ATG4B-219ENST00000479941 EYA1Q99502 592 aa14.62□□□□□ -0.07
ATG4B-219ENST00000479941 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
ATG4B-219ENST00000479941 WNK3Q9BYP7 1800 aa14.61□□□□□ -0.07
ATG4B-219ENST00000479941 NCAPD2Q15021 1401 aa14.6□□□□□ -0.07
ATG4B-219ENST00000479941 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
ATG4B-219ENST00000479941 IGSF1Q8N6C5 1336 aa14.6□□□□□ -0.07
ATG4B-219ENST00000479941 RGPD2P0DJD1 1756 aa14.6□□□□□ -0.07
ATG4B-219ENST00000479941 TNS2Q63HR2 1409 aa14.59□□□□□ -0.07
ATG4B-219ENST00000479941 DIAPH1O60610 1272 aaKnown RBP14.59□□□□□ -0.07
ATG4B-219ENST00000479941 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
ATG4B-219ENST00000479941 IL13P35225 146 aa14.59□□□□□ -0.07
ATG4B-219ENST00000479941 FAM196AQ6ZSG2 479 aa14.59□□□□□ -0.07
ATG4B-219ENST00000479941 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
ATG4B-219ENST00000479941 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
ATG4B-219ENST00000479941 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.08
ATG4B-219ENST00000479941 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.08
ATG4B-219ENST00000479941 MEGF6O75095 1541 aa14.57□□□□□ -0.08
ATG4B-219ENST00000479941 FAM182BQ5T319 152 aa14.57□□□□□ -0.08
ATG4B-219ENST00000479941 CCDC125Q86Z20 511 aa14.57□□□□□ -0.08
ATG4B-219ENST00000479941 PLEKHG2Q9H7P9 1386 aa14.57□□□□□ -0.08
ATG4B-219ENST00000479941 MARCH10Q8NA82 808 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-219ENST00000479941 ZCRB1Q8TBF4 217 aaKnown RBP14.56□□□□□ -0.08
ATG4B-219ENST00000479941 BCL9O00512 1426 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms