RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 HSP90AB2PQ58FF8 381 aa18.89■□□□□ 0.61
RPP40-205ENST00000479782 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
RPP40-205ENST00000479782 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
RPP40-205ENST00000479782 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
RPP40-205ENST00000479782 YTHDC1Q96MU7 727 aaKnown RBP18.88■□□□□ 0.61
RPP40-205ENST00000479782 COL18A1P39060 1754 aa18.88■□□□□ 0.61
RPP40-205ENST00000479782 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
RPP40-205ENST00000479782 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
RPP40-205ENST00000479782 EIF4A2Q14240 407 aaKnown RBP18.87■□□□□ 0.61
RPP40-205ENST00000479782 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
RPP40-205ENST00000479782 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
RPP40-205ENST00000479782 KIAA0232Q92628 1395 aa18.85■□□□□ 0.61
RPP40-205ENST00000479782 ZBTB7CA1YPR0 619 aa18.85■□□□□ 0.61
RPP40-205ENST00000479782 PNNQ9H307 717 aaKnown RBP18.85■□□□□ 0.61
RPP40-205ENST00000479782 JCADQ9P266 1359 aa18.84■□□□□ 0.61
RPP40-205ENST00000479782 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
RPP40-205ENST00000479782 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
RPP40-205ENST00000479782 RGPD5Q99666 1765 aa18.83■□□□□ 0.61
RPP40-205ENST00000479782 FCHSD2O94868 740 aa18.83■□□□□ 0.6
RPP40-205ENST00000479782 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
RPP40-205ENST00000479782 PRDM11Q9NQV5 511 aa18.82■□□□□ 0.6
RPP40-205ENST00000479782 COL14A1Q05707 1796 aaKnown RBP18.82■□□□□ 0.6
RPP40-205ENST00000479782 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
RPP40-205ENST00000479782 CAMTA1Q9Y6Y1 1673 aa18.81■□□□□ 0.6
RPP40-205ENST00000479782 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
RPP40-205ENST00000479782 AXIN2Q9Y2T1 843 aa18.8■□□□□ 0.6
RPP40-205ENST00000479782 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
RPP40-205ENST00000479782 KDRP35968 1356 aa18.79■□□□□ 0.6
RPP40-205ENST00000479782 ERBB3P21860 1342 aa18.78■□□□□ 0.6
RPP40-205ENST00000479782 CHRNA2Q15822 529 aa18.78■□□□□ 0.6
RPP40-205ENST00000479782 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
RPP40-205ENST00000479782 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
RPP40-205ENST00000479782 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
RPP40-205ENST00000479782 NEFMP07197 916 aa18.77■□□□□ 0.6
RPP40-205ENST00000479782 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
RPP40-205ENST00000479782 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
RPP40-205ENST00000479782 EYA1Q99502 592 aa18.77■□□□□ 0.6
RPP40-205ENST00000479782 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 HMOX1P09601 288 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 HSPA1LP34931 641 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
RPP40-205ENST00000479782 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
RPP40-205ENST00000479782 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
RPP40-205ENST00000479782 PRKAR2BP31323 418 aa18.75■□□□□ 0.59
RPP40-205ENST00000479782 PLCH1Q4KWH8 1693 aa18.75■□□□□ 0.59
RPP40-205ENST00000479782 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
RPP40-205ENST00000479782 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
RPP40-205ENST00000479782 APAF1O14727 1248 aa18.73■□□□□ 0.59
RPP40-205ENST00000479782 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 NBPF6Q5VWK0 638 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 TCP11L2Q8N4U5 519 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 NBPF4Q96M43 638 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 WDR17Q8IZU2 1322 aa18.72■□□□□ 0.59
RPP40-205ENST00000479782 NUTM2BA6NNL0 878 aaPredicted RBP18.71■□□□□ 0.59
RPP40-205ENST00000479782 NUTM2EB1AL46 878 aaPredicted RBP18.71■□□□□ 0.59
RPP40-205ENST00000479782 CSB-PGBD3P0DP91 1061 aa18.71■□□□□ 0.59
RPP40-205ENST00000479782 NUTM2AQ8IVF1 878 aaPredicted RBP18.71■□□□□ 0.59
RPP40-205ENST00000479782 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
RPP40-205ENST00000479782 NRAPQ86VF7 1730 aa18.69■□□□□ 0.58
RPP40-205ENST00000479782 ADAMTS2O95450 1211 aa18.69■□□□□ 0.58
RPP40-205ENST00000479782 BTG4Q9NY30 223 aa18.69■□□□□ 0.58
RPP40-205ENST00000479782 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
RPP40-205ENST00000479782 CCDC27Q2M243 656 aa18.68■□□□□ 0.58
RPP40-205ENST00000479782 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
RPP40-205ENST00000479782 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
RPP40-205ENST00000479782 CRB1P82279 1406 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
RPP40-205ENST00000479782 EVA1CP58658 441 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 SLIT2O94813 1529 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 LRP6O75581 1613 aa18.67■□□□□ 0.58
RPP40-205ENST00000479782 TOM1L2Q6ZVM7 507 aa18.66■□□□□ 0.58
RPP40-205ENST00000479782 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
RPP40-205ENST00000479782 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
RPP40-205ENST00000479782 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
RPP40-205ENST00000479782 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.58
RPP40-205ENST00000479782 PARP4Q9UKK3 1724 aaKnown RBP18.64■□□□□ 0.57
RPP40-205ENST00000479782 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
RPP40-205ENST00000479782 PDE3BQ13370 1112 aa18.64■□□□□ 0.57
RPP40-205ENST00000479782 FBXO41Q8TF61 875 aa18.64■□□□□ 0.57
RPP40-205ENST00000479782 RRP7AQ9Y3A4 280 aaKnown RBP18.64■□□□□ 0.57
RPP40-205ENST00000479782 ZNF521Q96K83 1311 aa18.64■□□□□ 0.57
RPP40-205ENST00000479782 RIPK4P57078 832 aa18.63■□□□□ 0.57
RPP40-205ENST00000479782 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
RPP40-205ENST00000479782 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
RPP40-205ENST00000479782 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
RPP40-205ENST00000479782 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
RPP40-205ENST00000479782 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
RPP40-205ENST00000479782 AMOTQ4VCS5 1084 aa18.62■□□□□ 0.57
RPP40-205ENST00000479782 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
RPP40-205ENST00000479782 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
RPP40-205ENST00000479782 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
RPP40-205ENST00000479782 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
RPP40-205ENST00000479782 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
RPP40-205ENST00000479782 PLEKHO1Q53GL0 409 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms