RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TRAF7Q6Q0C0 670 aa11.79□□□□□ -0.52
GAPVD1-217ENST00000479511 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
GAPVD1-217ENST00000479511 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
GAPVD1-217ENST00000479511 GPSM3Q9Y4H4 160 aa11.79□□□□□ -0.52
GAPVD1-217ENST00000479511 LZTS3O60299 673 aaPredicted RBP11.78□□□□□ -0.52
GAPVD1-217ENST00000479511 DKK1O94907 266 aa11.78□□□□□ -0.52
GAPVD1-217ENST00000479511 PDXDC2PQ6P474 469 aa11.78□□□□□ -0.52
GAPVD1-217ENST00000479511 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
GAPVD1-217ENST00000479511 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
GAPVD1-217ENST00000479511 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
GAPVD1-217ENST00000479511 BCL2L13Q9BXK5 485 aa11.77□□□□□ -0.53
GAPVD1-217ENST00000479511 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 EML3Q32P44 896 aa11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 DNAAF2Q9NVR5 837 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 BIN2Q9UBW5 565 aaPredicted RBP11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 KIAA1024Q9UPX6 916 aa11.76□□□□□ -0.53
GAPVD1-217ENST00000479511 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 APLP1P51693 650 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 NPAS4Q8IUM7 802 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 ZNF687Q8N1G0 1237 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 C1orf216Q8TAB5 229 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 GIPC2Q8TF65 315 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
GAPVD1-217ENST00000479511 PRMT3O60678 531 aa11.74□□□□□ -0.53
GAPVD1-217ENST00000479511 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
GAPVD1-217ENST00000479511 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
GAPVD1-217ENST00000479511 ANKRD33BA6NCL7 494 aa11.73□□□□□ -0.53
GAPVD1-217ENST00000479511 PBX2P40425 430 aa11.73□□□□□ -0.53
GAPVD1-217ENST00000479511 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
GAPVD1-217ENST00000479511 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-217ENST00000479511 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 PRIMPOLQ96LW4 560 aa11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 NOD1Q9Y239 953 aa11.72□□□□□ -0.53
GAPVD1-217ENST00000479511 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 OCLNQ16625 522 aa11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 TAS1R3Q7RTX0 852 aa11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 ARMC2Q8NEN0 867 aa11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
GAPVD1-217ENST00000479511 NR1I2O75469 434 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 ATP1A2P50993 1020 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 ZNF211Q13398 564 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 SIX5Q8N196 739 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 CXXC1Q9P0U4 656 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
GAPVD1-217ENST00000479511 ABL1P00519 1130 aa11.69□□□□□ -0.54
GAPVD1-217ENST00000479511 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
GAPVD1-217ENST00000479511 PRDM9Q9NQV7 894 aa11.69□□□□□ -0.54
GAPVD1-217ENST00000479511 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
GAPVD1-217ENST00000479511 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 LGR5O75473 907 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 PPP4CP60510 307 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 GTF2IP78347 998 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 TAGLNQ01995 201 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 EGFL7Q9UHF1 273 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 DOLKQ9UPQ8 538 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
GAPVD1-217ENST00000479511 H3BRB1 525 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 TK2O00142 265 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 MMP16P51512 607 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 SEC13P55735 322 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 TUT1Q9H6E5 874 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-217ENST00000479511 ICMTO60725 284 aa11.65□□□□□ -0.54
GAPVD1-217ENST00000479511 TCF3P15923 654 aa11.65□□□□□ -0.54
GAPVD1-217ENST00000479511 ECM1Q16610 540 aa11.65□□□□□ -0.54
GAPVD1-217ENST00000479511 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
GAPVD1-217ENST00000479511 BCAMP50895 628 aa11.64□□□□□ -0.55
GAPVD1-217ENST00000479511 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
GAPVD1-217ENST00000479511 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-217ENST00000479511 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 PTCRAQ6ISU1 281 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 TPCN2Q8NHX9 752 aa11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 SEPT3Q9UH03 358 aa11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 PCDHGA11Q9Y5H2 935 aa11.63□□□□□ -0.55
GAPVD1-217ENST00000479511 SOWAHBA6NEL2 793 aa11.62□□□□□ -0.55
GAPVD1-217ENST00000479511 SPSB2Q99619 263 aa11.62□□□□□ -0.55
GAPVD1-217ENST00000479511 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
GAPVD1-217ENST00000479511 CAPN12Q6ZSI9 719 aa11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 GLYCTKQ8IVS8 523 aa11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
GAPVD1-217ENST00000479511 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
GAPVD1-217ENST00000479511 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
GAPVD1-217ENST00000479511 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
GAPVD1-217ENST00000479511 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms