RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 VPS72Q15906 364 aa19.05■□□□□ 0.64
PCIF1-202ENST00000479348 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
PCIF1-202ENST00000479348 IP6K1Q92551 441 aa19.05■□□□□ 0.64
PCIF1-202ENST00000479348 CAMTA1Q9Y6Y1 1673 aa19.05■□□□□ 0.64
PCIF1-202ENST00000479348 COL18A1P39060 1754 aa19.04■□□□□ 0.64
PCIF1-202ENST00000479348 AMPHP49418 695 aa19.03■□□□□ 0.64
PCIF1-202ENST00000479348 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
PCIF1-202ENST00000479348 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
PCIF1-202ENST00000479348 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
PCIF1-202ENST00000479348 NRAPQ86VF7 1730 aa19.03■□□□□ 0.64
PCIF1-202ENST00000479348 FBLN1P23142 703 aa19.02■□□□□ 0.64
PCIF1-202ENST00000479348 RXRBP28702 533 aa19.02■□□□□ 0.64
PCIF1-202ENST00000479348 RBM6P78332 1123 aaKnown RBP19.02■□□□□ 0.64
PCIF1-202ENST00000479348 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.64
PCIF1-202ENST00000479348 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.64
PCIF1-202ENST00000479348 LTN1O94822 1766 aa19.02■□□□□ 0.64
PCIF1-202ENST00000479348 COL5A2P05997 1499 aaPredicted RBP19.01■□□□□ 0.63
PCIF1-202ENST00000479348 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
PCIF1-202ENST00000479348 STRN4Q9NRL3 753 aa19.01■□□□□ 0.63
PCIF1-202ENST00000479348 HOXC9P31274 260 aa19■□□□□ 0.63
PCIF1-202ENST00000479348 FLT4P35916 1363 aa19■□□□□ 0.63
PCIF1-202ENST00000479348 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
PCIF1-202ENST00000479348 POLKQ9UBT6 870 aa19■□□□□ 0.63
PCIF1-202ENST00000479348 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
PCIF1-202ENST00000479348 SPATA31A5Q5VU36 1347 aa18.99■□□□□ 0.63
PCIF1-202ENST00000479348 SPATA31A7Q8IWB4 1347 aa18.99■□□□□ 0.63
PCIF1-202ENST00000479348 WDR17Q8IZU2 1322 aa18.99■□□□□ 0.63
PCIF1-202ENST00000479348 ERBB3P21860 1342 aa18.98■□□□□ 0.63
PCIF1-202ENST00000479348 LARP1Q6PKG0 1096 aaKnown RBP18.98■□□□□ 0.63
PCIF1-202ENST00000479348 EMILIN1Q9Y6C2 1016 aa18.98■□□□□ 0.63
PCIF1-202ENST00000479348 INSRP06213 1382 aa18.97■□□□□ 0.63
PCIF1-202ENST00000479348 CRB1P82279 1406 aa18.97■□□□□ 0.63
PCIF1-202ENST00000479348 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
PCIF1-202ENST00000479348 ANKRD24Q8TF21 1146 aa18.97■□□□□ 0.63
PCIF1-202ENST00000479348 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
PCIF1-202ENST00000479348 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
PCIF1-202ENST00000479348 SPATA31A1Q5TZJ5 1347 aa18.96■□□□□ 0.63
PCIF1-202ENST00000479348 SMG6Q86US8 1419 aaKnown RBP18.96■□□□□ 0.63
PCIF1-202ENST00000479348 MAP2P11137 1827 aaKnown RBP18.96■□□□□ 0.63
PCIF1-202ENST00000479348 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
PCIF1-202ENST00000479348 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
PCIF1-202ENST00000479348 RGPD5Q99666 1765 aa18.95■□□□□ 0.62
PCIF1-202ENST00000479348 CARD10Q9BWT7 1032 aa18.95■□□□□ 0.62
PCIF1-202ENST00000479348 ONECUT3O60422 494 aaPredicted RBP18.94■□□□□ 0.62
PCIF1-202ENST00000479348 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
PCIF1-202ENST00000479348 GLI3P10071 1580 aa18.93■□□□□ 0.62
PCIF1-202ENST00000479348 BARGINQ6ZT62 677 aa18.93■□□□□ 0.62
PCIF1-202ENST00000479348 TCP11L2Q8N4U5 519 aa18.93■□□□□ 0.62
PCIF1-202ENST00000479348 PEAK1Q9H792 1746 aa18.93■□□□□ 0.62
PCIF1-202ENST00000479348 CNGB1Q14028 1251 aaPredicted RBP18.92■□□□□ 0.62
PCIF1-202ENST00000479348 MTHFSP49914 203 aa18.91■□□□□ 0.62
PCIF1-202ENST00000479348 RALBP1Q15311 655 aa18.91■□□□□ 0.62
PCIF1-202ENST00000479348 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
PCIF1-202ENST00000479348 NLRP2Q9NX02 1062 aa18.91■□□□□ 0.62
PCIF1-202ENST00000479348 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
PCIF1-202ENST00000479348 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
PCIF1-202ENST00000479348 PARD3Q8TEW0 1356 aa18.9■□□□□ 0.62
PCIF1-202ENST00000479348 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.61
PCIF1-202ENST00000479348 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
PCIF1-202ENST00000479348 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
PCIF1-202ENST00000479348 RGS12O14924 1447 aa18.86■□□□□ 0.61
PCIF1-202ENST00000479348 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
PCIF1-202ENST00000479348 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
PCIF1-202ENST00000479348 NBPF6Q5VWK0 638 aa18.85■□□□□ 0.61
PCIF1-202ENST00000479348 NBPF4Q96M43 638 aa18.85■□□□□ 0.61
PCIF1-202ENST00000479348 A0A0G2JS52 829 aa18.84■□□□□ 0.61
PCIF1-202ENST00000479348 MYT1Q01538 1121 aa18.84■□□□□ 0.61
PCIF1-202ENST00000479348 CFAP53Q96M91 514 aa18.84■□□□□ 0.61
PCIF1-202ENST00000479348 THSD7AQ9UPZ6 1657 aa18.83■□□□□ 0.61
PCIF1-202ENST00000479348 IL2RBP14784 551 aa18.82■□□□□ 0.6
PCIF1-202ENST00000479348 EYA1Q99502 592 aa18.82■□□□□ 0.6
PCIF1-202ENST00000479348 PRKRIP1Q9H875 184 aaPredicted RBP18.82■□□□□ 0.6
PCIF1-202ENST00000479348 DISP2A7MBM2 1401 aa18.82■□□□□ 0.6
PCIF1-202ENST00000479348 DIAPH1O60610 1272 aaKnown RBP18.81■□□□□ 0.6
PCIF1-202ENST00000479348 IL13P35225 146 aa18.81■□□□□ 0.6
PCIF1-202ENST00000479348 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
PCIF1-202ENST00000479348 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
PCIF1-202ENST00000479348 MYBBP1AQ9BQG0 1328 aaKnown RBP18.8■□□□□ 0.6
PCIF1-202ENST00000479348 KRT27Q7Z3Y8 459 aa18.79■□□□□ 0.6
PCIF1-202ENST00000479348 RAPGEF4Q8WZA2 1011 aa18.79■□□□□ 0.6
PCIF1-202ENST00000479348 PARP4Q9UKK3 1724 aaKnown RBP18.79■□□□□ 0.6
PCIF1-202ENST00000479348 EXOC5O00471 708 aa18.78■□□□□ 0.6
PCIF1-202ENST00000479348 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
PCIF1-202ENST00000479348 DDB1Q16531 1140 aa18.78■□□□□ 0.6
PCIF1-202ENST00000479348 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
PCIF1-202ENST00000479348 WNK3Q9BYP7 1800 aa18.78■□□□□ 0.6
PCIF1-202ENST00000479348 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
PCIF1-202ENST00000479348 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
PCIF1-202ENST00000479348 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
PCIF1-202ENST00000479348 COL3A1P02461 1466 aaPredicted RBP18.77■□□□□ 0.6
PCIF1-202ENST00000479348 ANP32CO43423 234 aa18.76■□□□□ 0.59
PCIF1-202ENST00000479348 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
PCIF1-202ENST00000479348 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
PCIF1-202ENST00000479348 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
PCIF1-202ENST00000479348 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
PCIF1-202ENST00000479348 KDRP35968 1356 aa18.74■□□□□ 0.59
PCIF1-202ENST00000479348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
PCIF1-202ENST00000479348 RGPD1P0DJD0 1748 aa18.73■□□□□ 0.59
PCIF1-202ENST00000479348 LRRC37A3O60309 1634 aa18.73■□□□□ 0.59
PCIF1-202ENST00000479348 MEGF6O75095 1541 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms