RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 CDV3Q9UKY7 258 aaKnown RBP8.27□□□□□ -1.09
VLDLR-204ENST00000478776 SOS2Q07890 1332 aaPredicted RBP8.27□□□□□ -1.09
VLDLR-204ENST00000478776 VSIG8P0DPA2 414 aa8.26□□□□□ -1.09
VLDLR-204ENST00000478776 DHX9Q08211 1270 aaKnown RBP8.26□□□□□ -1.09
VLDLR-204ENST00000478776 SKIV2LQ15477 1246 aaKnown RBP8.26□□□□□ -1.09
VLDLR-204ENST00000478776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.26□□□□□ -1.09
VLDLR-204ENST00000478776 PPP1R26Q5T8A7 1209 aaPredicted RBP8.26□□□□□ -1.09
VLDLR-204ENST00000478776 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
VLDLR-204ENST00000478776 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
VLDLR-204ENST00000478776 PNMA1Q8ND90 353 aa8.25□□□□□ -1.09
VLDLR-204ENST00000478776 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
VLDLR-204ENST00000478776 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
VLDLR-204ENST00000478776 KCTD15Q96SI1 283 aaPredicted RBP8.25□□□□□ -1.09
VLDLR-204ENST00000478776 DNMT3LQ9UJW3 386 aa8.25□□□□□ -1.09
VLDLR-204ENST00000478776 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
VLDLR-204ENST00000478776 PTK2Q05397 1052 aa8.24□□□□□ -1.09
VLDLR-204ENST00000478776 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
VLDLR-204ENST00000478776 AP1G2O75843 785 aa8.23□□□□□ -1.09
VLDLR-204ENST00000478776 CBLBQ13191 982 aa8.23□□□□□ -1.09
VLDLR-204ENST00000478776 NR6A1Q15406 480 aa8.23□□□□□ -1.09
VLDLR-204ENST00000478776 SH3D19Q5HYK7 790 aa8.23□□□□□ -1.09
VLDLR-204ENST00000478776 PROCA1Q8NCQ7 364 aaPredicted RBP8.22□□□□□ -1.09
VLDLR-204ENST00000478776 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
VLDLR-204ENST00000478776 PTSQ03393 145 aa8.2□□□□□ -1.1
VLDLR-204ENST00000478776 Q6ZVU0 165 aa8.2□□□□□ -1.1
VLDLR-204ENST00000478776 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
VLDLR-204ENST00000478776 GPSM3Q9Y4H4 160 aa8.2□□□□□ -1.1
VLDLR-204ENST00000478776 SPINT1O43278 529 aa8.19□□□□□ -1.1
VLDLR-204ENST00000478776 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
VLDLR-204ENST00000478776 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
VLDLR-204ENST00000478776 FAM117AQ9C073 453 aa8.19□□□□□ -1.1
VLDLR-204ENST00000478776 RELBQ01201 579 aa8.18□□□□□ -1.1
VLDLR-204ENST00000478776 INTS6LQ5JSJ4 861 aaKnown RBP8.18□□□□□ -1.1
VLDLR-204ENST00000478776 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
VLDLR-204ENST00000478776 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.18□□□□□ -1.1
VLDLR-204ENST00000478776 RAB15P59190 212 aa8.17□□□□□ -1.1
VLDLR-204ENST00000478776 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
VLDLR-204ENST00000478776 AGBL1Q96MI9 1066 aa8.17□□□□□ -1.1
VLDLR-204ENST00000478776 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
VLDLR-204ENST00000478776 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
VLDLR-204ENST00000478776 POLMQ9NP87 494 aaPredicted RBP8.17□□□□□ -1.1
VLDLR-204ENST00000478776 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
VLDLR-204ENST00000478776 TRIM52Q96A61 297 aa8.16□□□□□ -1.1
VLDLR-204ENST00000478776 INSM2Q96T92 566 aaPredicted RBP8.15□□□□□ -1.1
VLDLR-204ENST00000478776 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
VLDLR-204ENST00000478776 FBXO31Q5XUX0 539 aaPredicted RBP8.14□□□□□ -1.11
VLDLR-204ENST00000478776 GPR161Q8N6U8 529 aaKnown RBP8.14□□□□□ -1.11
VLDLR-204ENST00000478776 CDC14CA4D256 554 aa8.13□□□□□ -1.11
VLDLR-204ENST00000478776 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
VLDLR-204ENST00000478776 CTSOP43234 321 aaPredicted RBP8.13□□□□□ -1.11
VLDLR-204ENST00000478776 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
VLDLR-204ENST00000478776 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
VLDLR-204ENST00000478776 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
VLDLR-204ENST00000478776 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
VLDLR-204ENST00000478776 TMPRSS4Q9NRS4 437 aa8.13□□□□□ -1.11
VLDLR-204ENST00000478776 SLC35F4A4IF30 521 aa8.12□□□□□ -1.11
VLDLR-204ENST00000478776 VWA5B2Q8N398 1253 aa8.12□□□□□ -1.11
VLDLR-204ENST00000478776 ZNF784Q8NCA9 323 aaPredicted RBP8.12□□□□□ -1.11
VLDLR-204ENST00000478776 BCANQ96GW7 911 aa8.12□□□□□ -1.11
VLDLR-204ENST00000478776 OCSTAMPQ9BR26 566 aa8.12□□□□□ -1.11
VLDLR-204ENST00000478776 ITGA6P23229 1130 aa8.11□□□□□ -1.11
VLDLR-204ENST00000478776 ERVH48-1M5A8F1 160 aa8.1□□□□□ -1.11
VLDLR-204ENST00000478776 ADH1AP07327 375 aa8.1□□□□□ -1.11
VLDLR-204ENST00000478776 RFC5P40937 340 aa8.1□□□□□ -1.11
VLDLR-204ENST00000478776 KRT76Q01546 638 aa8.1□□□□□ -1.11
VLDLR-204ENST00000478776 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
VLDLR-204ENST00000478776 PCMTD1Q96MG8 357 aaPredicted RBP8.1□□□□□ -1.11
VLDLR-204ENST00000478776 HMX1Q9NP08 348 aaPredicted RBP8.1□□□□□ -1.11
VLDLR-204ENST00000478776 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
VLDLR-204ENST00000478776 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
VLDLR-204ENST00000478776 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
VLDLR-204ENST00000478776 PTGIRP43119 386 aa8.08□□□□□ -1.12
VLDLR-204ENST00000478776 TMEM259Q4ZIN3 620 aa8.08□□□□□ -1.12
VLDLR-204ENST00000478776 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
VLDLR-204ENST00000478776 ADD1P35611 737 aaKnown RBP8.07□□□□□ -1.12
VLDLR-204ENST00000478776 LYSMD3Q7Z3D4 306 aa8.07□□□□□ -1.12
VLDLR-204ENST00000478776 SEPT12Q8IYM1 358 aa8.07□□□□□ -1.12
VLDLR-204ENST00000478776 ESPNB1AK53 854 aa8.06□□□□□ -1.12
VLDLR-204ENST00000478776 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
VLDLR-204ENST00000478776 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
VLDLR-204ENST00000478776 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
VLDLR-204ENST00000478776 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
VLDLR-204ENST00000478776 LILRA1O75019 489 aa8.05□□□□□ -1.12
VLDLR-204ENST00000478776 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 GDF11O95390 407 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 MARSP56192 900 aaKnown RBP8.04□□□□□ -1.12
VLDLR-204ENST00000478776 RASSF7Q02833 373 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 FOXD4L5Q5VV16 416 aaPredicted RBP8.04□□□□□ -1.12
VLDLR-204ENST00000478776 PRICKLE2Q7Z3G6 844 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 GOPCQ9HD26 462 aa8.04□□□□□ -1.12
VLDLR-204ENST00000478776 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
VLDLR-204ENST00000478776 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
VLDLR-204ENST00000478776 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
VLDLR-204ENST00000478776 ESF1Q9H501 851 aaKnown RBP8.03□□□□□ -1.12
VLDLR-204ENST00000478776 SENP3-EIF4A1A0A087X0R7 540 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 MEN1O00255 615 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
VLDLR-204ENST00000478776 SLURP2P0DP57 97 aa8.02□□□□□ -1.13
VLDLR-204ENST00000478776 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms