RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 NLRP6P59044 892 aa22.48■■□□□ 1.19
GARNL3-215ENST00000478702 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
GARNL3-215ENST00000478702 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
GARNL3-215ENST00000478702 SBNO2Q9Y2G9 1366 aa22.45■■□□□ 1.18
GARNL3-215ENST00000478702 PTF1AQ7RTS3 328 aa22.44■■□□□ 1.18
GARNL3-215ENST00000478702 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
GARNL3-215ENST00000478702 CPSF1Q10570 1443 aaKnown RBP22.43■■□□□ 1.18
GARNL3-215ENST00000478702 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
GARNL3-215ENST00000478702 MON2Q7Z3U7 1717 aa22.43■■□□□ 1.18
GARNL3-215ENST00000478702 PLSCR1O15162 318 aa22.42■■□□□ 1.18
GARNL3-215ENST00000478702 DDB1Q16531 1140 aa22.42■■□□□ 1.18
GARNL3-215ENST00000478702 TOM1L2Q6ZVM7 507 aa22.42■■□□□ 1.18
GARNL3-215ENST00000478702 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
GARNL3-215ENST00000478702 WDR17Q8IZU2 1322 aa22.41■■□□□ 1.18
GARNL3-215ENST00000478702 SPON1Q9HCB6 807 aa22.41■■□□□ 1.18
GARNL3-215ENST00000478702 EVC2Q86UK5 1308 aa22.4■■□□□ 1.18
GARNL3-215ENST00000478702 KCNQ2O43526 872 aa22.4■■□□□ 1.18
GARNL3-215ENST00000478702 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
GARNL3-215ENST00000478702 NFAT5O94916 1531 aa22.4■■□□□ 1.18
GARNL3-215ENST00000478702 MARCH10Q8NA82 808 aaPredicted RBP22.39■■□□□ 1.17
GARNL3-215ENST00000478702 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
GARNL3-215ENST00000478702 BCL9O00512 1426 aa22.39■■□□□ 1.17
GARNL3-215ENST00000478702 LTN1O94822 1766 aa22.38■■□□□ 1.17
GARNL3-215ENST00000478702 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
GARNL3-215ENST00000478702 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
GARNL3-215ENST00000478702 MYOM1P52179 1685 aa22.37■■□□□ 1.17
GARNL3-215ENST00000478702 PROM2Q8N271 834 aa22.37■■□□□ 1.17
GARNL3-215ENST00000478702 BCL11BQ9C0K0 894 aaPredicted RBP22.37■■□□□ 1.17
GARNL3-215ENST00000478702 NINLQ9Y2I6 1382 aa22.36■■□□□ 1.17
GARNL3-215ENST00000478702 PDGFDQ9GZP0 370 aaPredicted RBP22.35■■□□□ 1.17
GARNL3-215ENST00000478702 PPP1R1BQ9UD71 204 aaPredicted RBP22.35■■□□□ 1.17
GARNL3-215ENST00000478702 NHSQ6T4R5 1651 aa22.34■■□□□ 1.17
GARNL3-215ENST00000478702 YY1P25490 414 aa22.34■■□□□ 1.17
GARNL3-215ENST00000478702 ABCC6O95255 1503 aa22.34■■□□□ 1.17
GARNL3-215ENST00000478702 KCNH5Q8NCM2 988 aa22.33■■□□□ 1.17
GARNL3-215ENST00000478702 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.17
GARNL3-215ENST00000478702 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
GARNL3-215ENST00000478702 CARD10Q9BWT7 1032 aa22.33■■□□□ 1.17
GARNL3-215ENST00000478702 TIMELESSQ9UNS1 1208 aa22.33■■□□□ 1.17
GARNL3-215ENST00000478702 KAT6BQ8WYB5 2073 aa22.32■■□□□ 1.16
GARNL3-215ENST00000478702 SOX12O15370 315 aa22.32■■□□□ 1.16
GARNL3-215ENST00000478702 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
GARNL3-215ENST00000478702 BTAF1O14981 1849 aa22.29■■□□□ 1.16
GARNL3-215ENST00000478702 TNS2Q63HR2 1409 aa22.29■■□□□ 1.16
GARNL3-215ENST00000478702 KTN1Q86UP2 1357 aaKnown RBP22.28■■□□□ 1.16
GARNL3-215ENST00000478702 CSB-PGBD3P0DP91 1061 aa22.28■■□□□ 1.16
GARNL3-215ENST00000478702 PAPPAQ13219 1627 aa22.28■■□□□ 1.16
GARNL3-215ENST00000478702 CCDC7Q96M83 1385 aa22.27■■□□□ 1.16
GARNL3-215ENST00000478702 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
GARNL3-215ENST00000478702 CCER1Q8TC90 406 aaPredicted RBP22.27■■□□□ 1.16
GARNL3-215ENST00000478702 CD163L1Q9NR16 1453 aa22.27■■□□□ 1.16
GARNL3-215ENST00000478702 USP47Q96K76 1375 aa22.26■■□□□ 1.15
GARNL3-215ENST00000478702 EXOC5O00471 708 aa22.26■■□□□ 1.15
GARNL3-215ENST00000478702 ZBTB7AO95365 584 aa22.26■■□□□ 1.15
GARNL3-215ENST00000478702 CHD4Q14839 1912 aa22.25■■□□□ 1.15
GARNL3-215ENST00000478702 PTGER2P43116 358 aa22.25■■□□□ 1.15
GARNL3-215ENST00000478702 USP31Q70CQ4 1352 aa22.25■■□□□ 1.15
GARNL3-215ENST00000478702 TESK2Q96S53 571 aa22.24■■□□□ 1.15
GARNL3-215ENST00000478702 SLC15A2Q16348 729 aa22.22■■□□□ 1.15
GARNL3-215ENST00000478702 ST20-MTHFSA0A0A6YYL1 179 aa22.21■■□□□ 1.15
GARNL3-215ENST00000478702 STK32BQ9NY57 414 aa22.21■■□□□ 1.15
GARNL3-215ENST00000478702 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
GARNL3-215ENST00000478702 ERBB3P21860 1342 aa22.21■■□□□ 1.15
GARNL3-215ENST00000478702 UTRNP46939 3433 aa22.21■■□□□ 1.15
GARNL3-215ENST00000478702 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
GARNL3-215ENST00000478702 NME9Q86XW9 330 aa22.2■■□□□ 1.14
GARNL3-215ENST00000478702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.2■■□□□ 1.14
GARNL3-215ENST00000478702 QSER1Q2KHR3 1735 aa22.19■■□□□ 1.14
GARNL3-215ENST00000478702 TUBGCP6Q96RT7 1819 aa22.18■■□□□ 1.14
GARNL3-215ENST00000478702 RGPD2P0DJD1 1756 aa22.18■■□□□ 1.14
GARNL3-215ENST00000478702 FAM208AQ9UK61 1670 aaKnown RBP22.18■■□□□ 1.14
GARNL3-215ENST00000478702 ACSBG1Q96GR2 724 aa22.18■■□□□ 1.14
GARNL3-215ENST00000478702 PUS7Q96PZ0 661 aaKnown RBP22.18■■□□□ 1.14
GARNL3-215ENST00000478702 SGIP1Q9BQI5 828 aa22.18■■□□□ 1.14
GARNL3-215ENST00000478702 COL24A1Q17RW2 1714 aa22.17■■□□□ 1.14
GARNL3-215ENST00000478702 SHANK3Q9BYB0 1731 aa22.15■■□□□ 1.14
GARNL3-215ENST00000478702 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
GARNL3-215ENST00000478702 SLC24A1O60721 1099 aa22.14■■□□□ 1.13
GARNL3-215ENST00000478702 IL2RBP14784 551 aa22.14■■□□□ 1.13
GARNL3-215ENST00000478702 SYT17Q9BSW7 474 aa22.14■■□□□ 1.13
GARNL3-215ENST00000478702 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
GARNL3-215ENST00000478702 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
GARNL3-215ENST00000478702 A0A1W2PP64 1363 aa22.13■■□□□ 1.13
GARNL3-215ENST00000478702 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
GARNL3-215ENST00000478702 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
GARNL3-215ENST00000478702 DOT1LQ8TEK3 1739 aa22.12■■□□□ 1.13
GARNL3-215ENST00000478702 SLC12A5Q9H2X9 1139 aa22.12■■□□□ 1.13
GARNL3-215ENST00000478702 LY75O60449 1722 aa22.11■■□□□ 1.13
GARNL3-215ENST00000478702 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
GARNL3-215ENST00000478702 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
GARNL3-215ENST00000478702 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
GARNL3-215ENST00000478702 KIF20BQ96Q89 1820 aa22.09■■□□□ 1.13
GARNL3-215ENST00000478702 TMF1P82094 1093 aa22.08■■□□□ 1.13
GARNL3-215ENST00000478702 HDGFL2Q7Z4V5 671 aaPredicted RBP22.08■■□□□ 1.13
GARNL3-215ENST00000478702 TERF2IPQ9NYB0 399 aa22.07■■□□□ 1.12
GARNL3-215ENST00000478702 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
GARNL3-215ENST00000478702 ANKRD36BQ8N2N9 1353 aa22.06■■□□□ 1.12
GARNL3-215ENST00000478702 MAP3K5Q99683 1374 aa22.05■■□□□ 1.12
GARNL3-215ENST00000478702 ARXQ96QS3 562 aa22.05■■□□□ 1.12
GARNL3-215ENST00000478702 IP6K1Q92551 441 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms