RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
GPNMB-210ENST00000478451 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
GPNMB-210ENST00000478451 SH3BP5LQ7L8J4 393 aa7.91□□□□□ -1.14
GPNMB-210ENST00000478451 EPS8L1Q8TE68 723 aa7.91□□□□□ -1.14
GPNMB-210ENST00000478451 PSMG3-AS1Q96PY0 264 aa7.91□□□□□ -1.14
GPNMB-210ENST00000478451 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
GPNMB-210ENST00000478451 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
GPNMB-210ENST00000478451 ZFP42Q96MM3 310 aa7.9□□□□□ -1.14
GPNMB-210ENST00000478451 WASF2Q9Y6W5 498 aa7.9□□□□□ -1.14
GPNMB-210ENST00000478451 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
GPNMB-210ENST00000478451 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
GPNMB-210ENST00000478451 MPNDQ8N594 471 aa7.89□□□□□ -1.15
GPNMB-210ENST00000478451 PNMA1Q8ND90 353 aa7.89□□□□□ -1.15
GPNMB-210ENST00000478451 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
GPNMB-210ENST00000478451 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
GPNMB-210ENST00000478451 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
GPNMB-210ENST00000478451 TRIM34Q9BYJ4 488 aa7.88□□□□□ -1.15
GPNMB-210ENST00000478451 ADAM23O75077 832 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 ADH1CP00326 375 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 ARID5BQ14865 1188 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 KANK3Q6NY19 840 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
GPNMB-210ENST00000478451 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
GPNMB-210ENST00000478451 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-210ENST00000478451 CDK15Q96Q40 435 aa7.86□□□□□ -1.15
GPNMB-210ENST00000478451 PTK2Q05397 1052 aa7.85□□□□□ -1.15
GPNMB-210ENST00000478451 NNTQ13423 1086 aa7.85□□□□□ -1.15
GPNMB-210ENST00000478451 ERFEQ4G0M1 354 aa7.85□□□□□ -1.15
GPNMB-210ENST00000478451 GPSM3Q9Y4H4 160 aa7.85□□□□□ -1.15
GPNMB-210ENST00000478451 SOCS7O14512 581 aa7.84□□□□□ -1.15
GPNMB-210ENST00000478451 MTMR14Q8NCE2 650 aa7.84□□□□□ -1.15
GPNMB-210ENST00000478451 MAP4K5Q9Y4K4 846 aa7.84□□□□□ -1.15
GPNMB-210ENST00000478451 ZBTB33Q86T24 672 aa7.83□□□□□ -1.16
GPNMB-210ENST00000478451 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
GPNMB-210ENST00000478451 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
GPNMB-210ENST00000478451 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
GPNMB-210ENST00000478451 FSHRP23945 695 aa7.82□□□□□ -1.16
GPNMB-210ENST00000478451 NR5A1Q13285 461 aa7.82□□□□□ -1.16
GPNMB-210ENST00000478451 SCARF1Q14162 830 aa7.82□□□□□ -1.16
GPNMB-210ENST00000478451 VASH1Q7L8A9 365 aaPredicted RBP7.82□□□□□ -1.16
GPNMB-210ENST00000478451 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
GPNMB-210ENST00000478451 APBB1O00213 710 aa7.81□□□□□ -1.16
GPNMB-210ENST00000478451 IRS1P35568 1242 aa7.81□□□□□ -1.16
GPNMB-210ENST00000478451 GRM5P41594 1212 aa7.81□□□□□ -1.16
GPNMB-210ENST00000478451 ADAM32Q8TC27 787 aa7.81□□□□□ -1.16
GPNMB-210ENST00000478451 NR3C2P08235 984 aa7.8□□□□□ -1.16
GPNMB-210ENST00000478451 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
GPNMB-210ENST00000478451 NDUFB9Q9Y6M9 179 aa7.8□□□□□ -1.16
GPNMB-210ENST00000478451 TIMP2P16035 220 aa7.79□□□□□ -1.16
GPNMB-210ENST00000478451 WDR4P57081 412 aaKnown RBP7.79□□□□□ -1.16
GPNMB-210ENST00000478451 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
GPNMB-210ENST00000478451 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
GPNMB-210ENST00000478451 PPFIA3O75145 1194 aa7.78□□□□□ -1.16
GPNMB-210ENST00000478451 GPR37L1O60883 481 aa7.77□□□□□ -1.17
GPNMB-210ENST00000478451 KLF16Q9BXK1 252 aaPredicted RBP7.77□□□□□ -1.17
GPNMB-210ENST00000478451 ZIC2O95409 532 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-210ENST00000478451 FBXO45P0C2W1 286 aa7.76□□□□□ -1.17
GPNMB-210ENST00000478451 KRT76Q01546 638 aa7.76□□□□□ -1.17
GPNMB-210ENST00000478451 NBPF20Q3BBV1 942 aa7.76□□□□□ -1.17
GPNMB-210ENST00000478451 ZNF385CQ66K41 422 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-210ENST00000478451 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
GPNMB-210ENST00000478451 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
GPNMB-210ENST00000478451 ITPKCQ96DU7 683 aa7.76□□□□□ -1.17
GPNMB-210ENST00000478451 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-210ENST00000478451 KCTD15Q96SI1 283 aaPredicted RBP7.76□□□□□ -1.17
GPNMB-210ENST00000478451 MSTNO14793 375 aa7.75□□□□□ -1.17
GPNMB-210ENST00000478451 PURBQ96QR8 312 aaKnown RBP7.75□□□□□ -1.17
GPNMB-210ENST00000478451 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
GPNMB-210ENST00000478451 TBC1D2BQ9UPU7 963 aa7.75□□□□□ -1.17
GPNMB-210ENST00000478451 SOBPA7XYQ1 873 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 NR1H3Q13133 447 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 MCM6Q14566 821 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 TMEM132AQ24JP5 1023 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 INTS6LQ5JSJ4 861 aaKnown RBP7.74□□□□□ -1.17
GPNMB-210ENST00000478451 SVOPQ8N4V2 548 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 CNTNAP3BQ96NU0 1288 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 CNTNAP3Q9BZ76 1288 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 PRM3Q9NNZ6 103 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 EMILIN1Q9Y6C2 1016 aa7.74□□□□□ -1.17
GPNMB-210ENST00000478451 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
GPNMB-210ENST00000478451 PPP1R26Q5T8A7 1209 aaPredicted RBP7.73□□□□□ -1.17
GPNMB-210ENST00000478451 PCDHB9Q9Y5E1 797 aa7.73□□□□□ -1.17
GPNMB-210ENST00000478451 MARSP56192 900 aaKnown RBP7.72□□□□□ -1.17
GPNMB-210ENST00000478451 DHX9Q08211 1270 aaKnown RBP7.72□□□□□ -1.17
GPNMB-210ENST00000478451 Q8N3U1 123 aa7.72□□□□□ -1.17
GPNMB-210ENST00000478451 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
GPNMB-210ENST00000478451 MAN1A2O60476 641 aa7.71□□□□□ -1.18
GPNMB-210ENST00000478451 RAB15P59190 212 aa7.71□□□□□ -1.18
GPNMB-210ENST00000478451 MEIOBQ8N635 442 aa7.71□□□□□ -1.18
GPNMB-210ENST00000478451 ESPNB1AK53 854 aa7.7□□□□□ -1.18
GPNMB-210ENST00000478451 SLURP2P0DP57 97 aa7.7□□□□□ -1.18
GPNMB-210ENST00000478451 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
GPNMB-210ENST00000478451 ZNF330Q9Y3S2 320 aaPredicted RBP7.7□□□□□ -1.18
GPNMB-210ENST00000478451 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
GPNMB-210ENST00000478451 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
GPNMB-210ENST00000478451 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-210ENST00000478451 IRF5Q13568 498 aa7.68□□□□□ -1.18
GPNMB-210ENST00000478451 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
GPNMB-210ENST00000478451 SEPT12Q8IYM1 358 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms