RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 ERFEQ4G0M1 354 aa5.96□□□□□ -1.46
CACUL1-202ENST00000477583 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.95□□□□□ -1.46
CACUL1-202ENST00000477583 SLC10A4Q96EP9 437 aa5.95□□□□□ -1.46
CACUL1-202ENST00000477583 ARHGAP9Q9BRR9 750 aa5.95□□□□□ -1.46
CACUL1-202ENST00000477583 PGPEP1Q9NXJ5 209 aa5.95□□□□□ -1.46
CACUL1-202ENST00000477583 TTLL8A6PVC2 850 aa5.94□□□□□ -1.46
CACUL1-202ENST00000477583 CTDSPL2Q05D32 466 aa5.94□□□□□ -1.46
CACUL1-202ENST00000477583 PPP1R26Q5T8A7 1209 aaPredicted RBP5.94□□□□□ -1.46
CACUL1-202ENST00000477583 PDXDC2PQ6P474 469 aa5.94□□□□□ -1.46
CACUL1-202ENST00000477583 FKBPLQ9UIM3 349 aa5.94□□□□□ -1.46
CACUL1-202ENST00000477583 CBLBQ13191 982 aa5.93□□□□□ -1.46
CACUL1-202ENST00000477583 LRRN4Q8WUT4 740 aa5.93□□□□□ -1.46
CACUL1-202ENST00000477583 KCTD15Q96SI1 283 aaPredicted RBP5.93□□□□□ -1.46
CACUL1-202ENST00000477583 CDV3Q9UKY7 258 aaKnown RBP5.93□□□□□ -1.46
CACUL1-202ENST00000477583 PTSQ03393 145 aa5.92□□□□□ -1.46
CACUL1-202ENST00000477583 Q6ZVU0 165 aa5.92□□□□□ -1.46
CACUL1-202ENST00000477583 ZBTB33Q86T24 672 aa5.92□□□□□ -1.46
CACUL1-202ENST00000477583 ZC3H4Q9UPT8 1303 aaKnown RBP5.92□□□□□ -1.46
CACUL1-202ENST00000477583 FIGNL2A6NMB9 653 aa5.91□□□□□ -1.46
CACUL1-202ENST00000477583 DHX9Q08211 1270 aaKnown RBP5.91□□□□□ -1.46
CACUL1-202ENST00000477583 NR6A1Q15406 480 aa5.91□□□□□ -1.46
CACUL1-202ENST00000477583 ATP1B4Q9UN42 357 aaPredicted RBP5.91□□□□□ -1.46
CACUL1-202ENST00000477583 SPINT1O43278 529 aa5.9□□□□□ -1.46
CACUL1-202ENST00000477583 SKIV2LQ15477 1246 aaKnown RBP5.9□□□□□ -1.46
CACUL1-202ENST00000477583 CNTNAP3BQ96NU0 1288 aa5.9□□□□□ -1.46
CACUL1-202ENST00000477583 CNTNAP3Q9BZ76 1288 aa5.9□□□□□ -1.46
CACUL1-202ENST00000477583 KRT76Q01546 638 aa5.89□□□□□ -1.47
CACUL1-202ENST00000477583 PTK2Q05397 1052 aa5.89□□□□□ -1.47
CACUL1-202ENST00000477583 SH3D19Q5HYK7 790 aa5.89□□□□□ -1.47
CACUL1-202ENST00000477583 INTS6LQ5JSJ4 861 aaKnown RBP5.89□□□□□ -1.47
CACUL1-202ENST00000477583 CCDC155Q8N6L0 562 aa5.89□□□□□ -1.47
CACUL1-202ENST00000477583 AGBL1Q96MI9 1066 aa5.89□□□□□ -1.47
CACUL1-202ENST00000477583 RELBQ01201 579 aa5.88□□□□□ -1.47
CACUL1-202ENST00000477583 FBXO31Q5XUX0 539 aaPredicted RBP5.88□□□□□ -1.47
CACUL1-202ENST00000477583 GPR161Q8N6U8 529 aaKnown RBP5.88□□□□□ -1.47
CACUL1-202ENST00000477583 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.88□□□□□ -1.47
CACUL1-202ENST00000477583 GPSM3Q9Y4H4 160 aa5.88□□□□□ -1.47
CACUL1-202ENST00000477583 SLC35F4A4IF30 521 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 AP1G2O75843 785 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 CTSOP43234 321 aaPredicted RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 NBPF20Q3BBV1 942 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 PPP2R2DQ66LE6 453 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 PROCA1Q8NCQ7 364 aaPredicted RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 PNMA1Q8ND90 353 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 ADAM32Q8TC27 787 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 NANOS1Q8WY41 292 aaKnown RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 DDRGK1Q96HY6 314 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 OCSTAMPQ9BR26 566 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 COL25A1Q9BXS0 654 aaPredicted RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 KDM4CQ9H3R0 1056 aa5.87□□□□□ -1.47
CACUL1-202ENST00000477583 GPBP1L1Q9HC44 474 aaPredicted RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 POLMQ9NP87 494 aaPredicted RBP5.87□□□□□ -1.47
CACUL1-202ENST00000477583 RAB15P59190 212 aa5.86□□□□□ -1.47
CACUL1-202ENST00000477583 KCNMA1Q12791 1236 aa5.86□□□□□ -1.47
CACUL1-202ENST00000477583 INSM2Q96T92 566 aaPredicted RBP5.86□□□□□ -1.47
CACUL1-202ENST00000477583 FAM117AQ9C073 453 aa5.86□□□□□ -1.47
CACUL1-202ENST00000477583 CDC14CA4D256 554 aa5.85□□□□□ -1.47
CACUL1-202ENST00000477583 RNF225M0QZC1 329 aaPredicted RBP5.85□□□□□ -1.47
CACUL1-202ENST00000477583 ITGA6P23229 1130 aa5.85□□□□□ -1.47
CACUL1-202ENST00000477583 ZNF784Q8NCA9 323 aaPredicted RBP5.85□□□□□ -1.47
CACUL1-202ENST00000477583 ZNF395Q9H8N7 513 aaPredicted RBP5.85□□□□□ -1.47
CACUL1-202ENST00000477583 TMPRSS4Q9NRS4 437 aa5.85□□□□□ -1.47
CACUL1-202ENST00000477583 ADH1AP07327 375 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 USP17L8P0C7I0 530 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 RNFT1Q5M7Z0 435 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 SV2AQ7L0J3 742 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 DZIP3Q86Y13 1208 aaKnown RBP5.84□□□□□ -1.47
CACUL1-202ENST00000477583 RNF217Q8TC41 542 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 EPS8L1Q8TE68 723 aa5.84□□□□□ -1.47
CACUL1-202ENST00000477583 HMX1Q9NP08 348 aaPredicted RBP5.84□□□□□ -1.47
CACUL1-202ENST00000477583 GSK3AP49840 483 aa5.83□□□□□ -1.48
CACUL1-202ENST00000477583 VWA5B2Q8N398 1253 aa5.83□□□□□ -1.48
CACUL1-202ENST00000477583 SVOPQ8N4V2 548 aa5.83□□□□□ -1.48
CACUL1-202ENST00000477583 KCTD17Q8N5Z5 321 aa5.83□□□□□ -1.48
CACUL1-202ENST00000477583 ADAMTS8Q9UP79 889 aa5.83□□□□□ -1.48
CACUL1-202ENST00000477583 ERVH48-1M5A8F1 160 aa5.82□□□□□ -1.48
CACUL1-202ENST00000477583 ZNF385CQ66K41 422 aaPredicted RBP5.82□□□□□ -1.48
CACUL1-202ENST00000477583 TMEM151AQ8N4L1 468 aa5.82□□□□□ -1.48
CACUL1-202ENST00000477583 SENP3-EIF4A1A0A087X0R7 540 aa5.81□□□□□ -1.48
CACUL1-202ENST00000477583 LILRA1O75019 489 aa5.81□□□□□ -1.48
CACUL1-202ENST00000477583 RASSF7Q02833 373 aa5.81□□□□□ -1.48
CACUL1-202ENST00000477583 FOXD4L5Q5VV16 416 aaPredicted RBP5.81□□□□□ -1.48
CACUL1-202ENST00000477583 ESPNB1AK53 854 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 GDF11O95390 407 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 SLURP2P0DP57 97 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 RFC5P40937 340 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 PTGIRP43119 386 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 WHAMMQ8TF30 809 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 TRIM52Q96A61 297 aa5.8□□□□□ -1.48
CACUL1-202ENST00000477583 ADD1P35611 737 aaKnown RBP5.79□□□□□ -1.48
CACUL1-202ENST00000477583 LYSMD3Q7Z3D4 306 aa5.79□□□□□ -1.48
CACUL1-202ENST00000477583 SEPT12Q8IYM1 358 aa5.79□□□□□ -1.48
CACUL1-202ENST00000477583 KDF1Q8NAX2 398 aaPredicted RBP5.79□□□□□ -1.48
CACUL1-202ENST00000477583 CYLDQ9NQC7 956 aa5.79□□□□□ -1.48
CACUL1-202ENST00000477583 ADAMTS2O95450 1211 aa5.78□□□□□ -1.48
CACUL1-202ENST00000477583 MARSP56192 900 aaKnown RBP5.77□□□□□ -1.49
CACUL1-202ENST00000477583 PRICKLE2Q7Z3G6 844 aa5.77□□□□□ -1.49
CACUL1-202ENST00000477583 TRIM34Q9BYJ4 488 aa5.77□□□□□ -1.49
CACUL1-202ENST00000477583 ZBBXA8MT70 800 aa5.76□□□□□ -1.49
CACUL1-202ENST00000477583 ATP5J2-PTCD1G3V325 749 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms