RNA–Protein interactions for RNA: ENST00000477448.1

SOBP-202, Transcript of sine oculis binding protein homolog, humanhuman

TSL 5

Gene SOBP, Length 1,535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-202ENST00000477448 CHRNA2Q15822 529 aa34.84■■■■□ 3.17
SOBP-202ENST00000477448 KIAA0232Q92628 1395 aa34.83■■■■□ 3.17
SOBP-202ENST00000477448 MTHFSP49914 203 aa34.83■■■■□ 3.17
SOBP-202ENST00000477448 PRDM11Q9NQV5 511 aa34.83■■■■□ 3.17
SOBP-202ENST00000477448 PHRF1Q9P1Y6 1649 aaKnown RBP34.83■■■■□ 3.17
SOBP-202ENST00000477448 FBLN1P23142 703 aa34.82■■■■□ 3.16
SOBP-202ENST00000477448 SMG6Q86US8 1419 aaKnown RBP34.81■■■■□ 3.16
SOBP-202ENST00000477448 USP19O94966 1318 aa34.81■■■■□ 3.16
SOBP-202ENST00000477448 SLIT3O75094 1523 aa34.8■■■■□ 3.16
SOBP-202ENST00000477448 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.8■■■■□ 3.16
SOBP-202ENST00000477448 GCP02774 474 aa34.79■■■■□ 3.16
SOBP-202ENST00000477448 POLKQ9UBT6 870 aa34.79■■■■□ 3.16
SOBP-202ENST00000477448 VPS72Q15906 364 aa34.78■■■■□ 3.16
SOBP-202ENST00000477448 CCDC9Q9Y3X0 531 aaKnown RBP34.78■■■■□ 3.16
SOBP-202ENST00000477448 PNISRQ8TF01 805 aaKnown RBP34.77■■■■□ 3.16
SOBP-202ENST00000477448 NWD2Q9ULI1 1742 aa34.77■■■■□ 3.16
SOBP-202ENST00000477448 COL14A1Q05707 1796 aaKnown RBP34.77■■■■□ 3.16
SOBP-202ENST00000477448 NFAT5O94916 1531 aa34.76■■■■□ 3.16
SOBP-202ENST00000477448 LTN1O94822 1766 aa34.76■■■■□ 3.16
SOBP-202ENST00000477448 PEAK1Q9H792 1746 aa34.75■■■■□ 3.15
SOBP-202ENST00000477448 GLI3P10071 1580 aa34.75■■■■□ 3.15
SOBP-202ENST00000477448 RRS1Q15050 365 aaKnown RBP34.74■■■■□ 3.15
SOBP-202ENST00000477448 EMILIN1Q9Y6C2 1016 aa34.74■■■■□ 3.15
SOBP-202ENST00000477448 COL3A1P02461 1466 aaPredicted RBP34.73■■■■□ 3.15
SOBP-202ENST00000477448 SOX12O15370 315 aa34.73■■■■□ 3.15
SOBP-202ENST00000477448 CFAP53Q96M91 514 aa34.71■■■■□ 3.15
SOBP-202ENST00000477448 NRAPQ86VF7 1730 aa34.71■■■■□ 3.15
SOBP-202ENST00000477448 FAM9BQ8IZU0 186 aa34.71■■■■□ 3.15
SOBP-202ENST00000477448 INSRP06213 1382 aa34.7■■■■□ 3.15
SOBP-202ENST00000477448 ZBTB7CA1YPR0 619 aa34.7■■■■□ 3.14
SOBP-202ENST00000477448 KCNH5Q8NCM2 988 aa34.7■■■■□ 3.14
SOBP-202ENST00000477448 STRN4Q9NRL3 753 aa34.68■■■■□ 3.14
SOBP-202ENST00000477448 MAP3K19Q56UN5 1328 aa34.67■■■■□ 3.14
SOBP-202ENST00000477448 PPM1GO15355 546 aaPredicted RBP34.67■■■■□ 3.14
SOBP-202ENST00000477448 UPF1Q92900 1129 aaKnown RBP eCLIP34.66■■■■□ 3.14
SOBP-202ENST00000477448 CPDO75976 1380 aa34.66■■■■□ 3.14
SOBP-202ENST00000477448 KIF24Q5T7B8 1368 aa34.62■■■■□ 3.13
SOBP-202ENST00000477448 SEPT12Q8IYM1 358 aa34.62■■■■□ 3.13
SOBP-202ENST00000477448 CAMTA1Q9Y6Y1 1673 aa34.62■■■■□ 3.13
SOBP-202ENST00000477448 FAM98CQ17RN3 349 aaKnown RBP34.61■■■■□ 3.13
SOBP-202ENST00000477448 SPATA31A5Q5VU36 1347 aa34.61■■■■□ 3.13
SOBP-202ENST00000477448 SPATA31A7Q8IWB4 1347 aa34.61■■■■□ 3.13
SOBP-202ENST00000477448 FLT4P35916 1363 aa34.61■■■■□ 3.13
SOBP-202ENST00000477448 EVA1CP58658 441 aa34.6■■■■□ 3.13
SOBP-202ENST00000477448 ONECUT3O60422 494 aaPredicted RBP34.6■■■■□ 3.13
SOBP-202ENST00000477448 WDR43Q15061 677 aaKnown RBP eCLIP34.6■■■■□ 3.13
SOBP-202ENST00000477448 RTL1A6NKG5 1358 aa34.58■■■■□ 3.13
SOBP-202ENST00000477448 LARP1Q6PKG0 1096 aaKnown RBP34.57■■■■□ 3.12
SOBP-202ENST00000477448 YTHDC1Q96MU7 727 aaKnown RBP34.57■■■■□ 3.12
SOBP-202ENST00000477448 LMO7Q8WWI1 1683 aa34.56■■■■□ 3.12
SOBP-202ENST00000477448 DIAPH1O60610 1272 aaKnown RBP34.56■■■■□ 3.12
SOBP-202ENST00000477448 AMPHP49418 695 aa34.56■■■■□ 3.12
SOBP-202ENST00000477448 ARHGEF25Q86VW2 580 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 USP35Q9P2H5 1018 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 AXIN2Q9Y2T1 843 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 A0A0G2JS52 829 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 MYT1Q01538 1121 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 ADAMTS8Q9UP79 889 aa34.55■■■■□ 3.12
SOBP-202ENST00000477448 HSP90AB2PQ58FF8 381 aa34.54■■■■□ 3.12
SOBP-202ENST00000477448 SPATA31A1Q5TZJ5 1347 aa34.54■■■■□ 3.12
SOBP-202ENST00000477448 HOXC9P31274 260 aa34.53■■■■□ 3.12
SOBP-202ENST00000477448 NUDCQ9Y266 331 aa34.52■■■■□ 3.12
SOBP-202ENST00000477448 RGPD5Q99666 1765 aa34.52■■■■□ 3.12
SOBP-202ENST00000477448 BRWD3Q6RI45 1802 aa34.51■■■■□ 3.12
SOBP-202ENST00000477448 COL18A1P39060 1754 aa34.51■■■■□ 3.12
SOBP-202ENST00000477448 BLMP54132 1417 aaPredicted RBP34.51■■■■□ 3.11
SOBP-202ENST00000477448 IL13P35225 146 aa34.5■■■■□ 3.11
SOBP-202ENST00000477448 IP6K1Q92551 441 aa34.5■■■■□ 3.11
SOBP-202ENST00000477448 RGPD1P0DJD0 1748 aa34.49■■■■□ 3.11
SOBP-202ENST00000477448 COL5A2P05997 1499 aaPredicted RBP34.49■■■■□ 3.11
SOBP-202ENST00000477448 EIF4A2Q14240 407 aaKnown RBP34.48■■■■□ 3.11
SOBP-202ENST00000477448 ABCC6O95255 1503 aa34.48■■■■□ 3.11
SOBP-202ENST00000477448 EP400Q96L91 3159 aa34.47■■■■□ 3.11
SOBP-202ENST00000477448 U2SURPO15042 1029 aaKnown RBP34.45■■■■□ 3.11
SOBP-202ENST00000477448 KRT27Q7Z3Y8 459 aa34.45■■■■□ 3.11
SOBP-202ENST00000477448 U2AF1L5P0DN76 240 aaPredicted RBP34.45■■■■□ 3.1
SOBP-202ENST00000477448 U2AF1Q01081 240 aaKnown RBP eCLIP34.45■■■■□ 3.1
SOBP-202ENST00000477448 FAM182BQ5T319 152 aa34.4■■■■□ 3.1
SOBP-202ENST00000477448 TCP11L2Q8N4U5 519 aa34.4■■■■□ 3.1
SOBP-202ENST00000477448 HNRNPUQ00839 825 aaKnown RBP eCLIP34.4■■■■□ 3.1
SOBP-202ENST00000477448 RGPD2P0DJD1 1756 aa34.39■■■■□ 3.1
SOBP-202ENST00000477448 BARGINQ6ZT62 677 aa34.38■■■■□ 3.09
SOBP-202ENST00000477448 TOM1L2Q6ZVM7 507 aa34.38■■■■□ 3.09
SOBP-202ENST00000477448 THSD7AQ9UPZ6 1657 aa34.37■■■■□ 3.09
SOBP-202ENST00000477448 CRB1P82279 1406 aa34.37■■■■□ 3.09
SOBP-202ENST00000477448 CCDC146Q8IYE0 955 aa34.35■■■■□ 3.09
SOBP-202ENST00000477448 WDR17Q8IZU2 1322 aa34.35■■■■□ 3.09
SOBP-202ENST00000477448 CSB-PGBD3P0DP91 1061 aa34.35■■■■□ 3.09
SOBP-202ENST00000477448 LTV1Q96GA3 475 aaPredicted RBP34.34■■■■□ 3.09
SOBP-202ENST00000477448 FAM208AQ9UK61 1670 aaKnown RBP34.33■■■■□ 3.09
SOBP-202ENST00000477448 THRAP3Q9Y2W1 955 aaKnown RBP34.32■■■■□ 3.08
SOBP-202ENST00000477448 IGSF1Q8N6C5 1336 aa34.31■■■■□ 3.08
SOBP-202ENST00000477448 FCHSD2O94868 740 aa34.31■■■■□ 3.08
SOBP-202ENST00000477448 EYA1Q99502 592 aa34.31■■■■□ 3.08
SOBP-202ENST00000477448 RSPH6AQ9H0K4 717 aa34.31■■■■□ 3.08
SOBP-202ENST00000477448 HMOX1P09601 288 aa34.3■■■■□ 3.08
SOBP-202ENST00000477448 RUNDC1Q96C34 613 aa34.3■■■■□ 3.08
SOBP-202ENST00000477448 ANKRD24Q8TF21 1146 aa34.3■■■■□ 3.08
SOBP-202ENST00000477448 ERBB3P21860 1342 aa34.29■■■■□ 3.08
SOBP-202ENST00000477448 PLEKHF1Q96S99 279 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms