RNA–Protein interactions for RNA: ENST00000477276.2

PTPN23-204, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 5

Gene PTPN23, Length 882 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-204ENST00000477276 AXIN2Q9Y2T1 843 aa24.4■■□□□ 1.5
PTPN23-204ENST00000477276 SPATA31A5Q5VU36 1347 aa24.39■■□□□ 1.5
PTPN23-204ENST00000477276 SPATA31A7Q8IWB4 1347 aa24.39■■□□□ 1.5
PTPN23-204ENST00000477276 COG3Q96JB2 828 aa24.39■■□□□ 1.49
PTPN23-204ENST00000477276 ZBTB7CA1YPR0 619 aa24.38■■□□□ 1.49
PTPN23-204ENST00000477276 PEAK1Q9H792 1746 aa24.38■■□□□ 1.49
PTPN23-204ENST00000477276 WNK3Q9BYP7 1800 aa24.38■■□□□ 1.49
PTPN23-204ENST00000477276 STRN4Q9NRL3 753 aa24.37■■□□□ 1.49
PTPN23-204ENST00000477276 SOCS7O14512 581 aa24.36■■□□□ 1.49
PTPN23-204ENST00000477276 FBLN1P23142 703 aa24.36■■□□□ 1.49
PTPN23-204ENST00000477276 EP400Q96L91 3159 aa24.36■■□□□ 1.49
PTPN23-204ENST00000477276 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
PTPN23-204ENST00000477276 LARP1Q6PKG0 1096 aaKnown RBP24.35■■□□□ 1.49
PTPN23-204ENST00000477276 CGNL1Q0VF96 1302 aa24.34■■□□□ 1.49
PTPN23-204ENST00000477276 CCDC9Q9Y3X0 531 aaKnown RBP24.33■■□□□ 1.49
PTPN23-204ENST00000477276 CRB1P82279 1406 aa24.33■■□□□ 1.49
PTPN23-204ENST00000477276 MAP3K19Q56UN5 1328 aa24.33■■□□□ 1.48
PTPN23-204ENST00000477276 ONECUT3O60422 494 aaPredicted RBP24.32■■□□□ 1.48
PTPN23-204ENST00000477276 WDR17Q8IZU2 1322 aa24.3■■□□□ 1.48
PTPN23-204ENST00000477276 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
PTPN23-204ENST00000477276 FAM98CQ17RN3 349 aaKnown RBP24.29■■□□□ 1.48
PTPN23-204ENST00000477276 FAM208AQ9UK61 1670 aaKnown RBP24.29■■□□□ 1.48
PTPN23-204ENST00000477276 PARP4Q9UKK3 1724 aaKnown RBP24.29■■□□□ 1.48
PTPN23-204ENST00000477276 RTL1A6NKG5 1358 aa24.29■■□□□ 1.48
PTPN23-204ENST00000477276 NSD2O96028 1365 aa24.29■■□□□ 1.48
PTPN23-204ENST00000477276 EVA1CP58658 441 aa24.28■■□□□ 1.48
PTPN23-204ENST00000477276 RRS1Q15050 365 aaKnown RBP24.28■■□□□ 1.48
PTPN23-204ENST00000477276 ERBB3P21860 1342 aa24.28■■□□□ 1.48
PTPN23-204ENST00000477276 MAP2P11137 1827 aaKnown RBP24.28■■□□□ 1.48
PTPN23-204ENST00000477276 PER1O15534 1290 aaPredicted RBP24.27■■□□□ 1.48
PTPN23-204ENST00000477276 SEPT12Q8IYM1 358 aa24.27■■□□□ 1.48
PTPN23-204ENST00000477276 RGPD2P0DJD1 1756 aa24.26■■□□□ 1.47
PTPN23-204ENST00000477276 LRRC37A3O60309 1634 aa24.26■■□□□ 1.47
PTPN23-204ENST00000477276 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
PTPN23-204ENST00000477276 IP6K1Q92551 441 aa24.26■■□□□ 1.47
PTPN23-204ENST00000477276 HOXC9P31274 260 aa24.25■■□□□ 1.47
PTPN23-204ENST00000477276 BARGINQ6ZT62 677 aa24.24■■□□□ 1.47
PTPN23-204ENST00000477276 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
PTPN23-204ENST00000477276 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
PTPN23-204ENST00000477276 TCP11L2Q8N4U5 519 aa24.23■■□□□ 1.47
PTPN23-204ENST00000477276 DISP2A7MBM2 1401 aa24.23■■□□□ 1.47
PTPN23-204ENST00000477276 ANKRD24Q8TF21 1146 aa24.22■■□□□ 1.47
PTPN23-204ENST00000477276 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
PTPN23-204ENST00000477276 KIF24Q5T7B8 1368 aa24.21■■□□□ 1.47
PTPN23-204ENST00000477276 TOM1L2Q6ZVM7 507 aa24.21■■□□□ 1.47
PTPN23-204ENST00000477276 THRAP3Q9Y2W1 955 aaKnown RBP24.21■■□□□ 1.47
PTPN23-204ENST00000477276 KNSTRNQ9Y448 316 aa24.21■■□□□ 1.47
PTPN23-204ENST00000477276 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
PTPN23-204ENST00000477276 FLT4P35916 1363 aa24.2■■□□□ 1.46
PTPN23-204ENST00000477276 CARD10Q9BWT7 1032 aa24.2■■□□□ 1.46
PTPN23-204ENST00000477276 CSB-PGBD3P0DP91 1061 aa24.18■■□□□ 1.46
PTPN23-204ENST00000477276 AMPHP49418 695 aa24.18■■□□□ 1.46
PTPN23-204ENST00000477276 INSRP06213 1382 aa24.17■■□□□ 1.46
PTPN23-204ENST00000477276 NPC1L1Q9UHC9 1359 aa24.16■■□□□ 1.46
PTPN23-204ENST00000477276 POLKQ9UBT6 870 aa24.16■■□□□ 1.46
PTPN23-204ENST00000477276 A0A0G2JS52 829 aa24.15■■□□□ 1.46
PTPN23-204ENST00000477276 MYT1Q01538 1121 aa24.15■■□□□ 1.46
PTPN23-204ENST00000477276 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
PTPN23-204ENST00000477276 KRT27Q7Z3Y8 459 aa24.15■■□□□ 1.46
PTPN23-204ENST00000477276 UPF1Q92900 1129 aaKnown RBP eCLIP24.15■■□□□ 1.46
PTPN23-204ENST00000477276 TNNT2P45379 298 aaPredicted RBP24.14■■□□□ 1.45
PTPN23-204ENST00000477276 LTV1Q96GA3 475 aaPredicted RBP24.14■■□□□ 1.45
PTPN23-204ENST00000477276 MORC1Q86VD1 984 aa24.12■■□□□ 1.45
PTPN23-204ENST00000477276 NLRP2Q9NX02 1062 aa24.12■■□□□ 1.45
PTPN23-204ENST00000477276 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
PTPN23-204ENST00000477276 SHANK3Q9BYB0 1731 aa24.11■■□□□ 1.45
PTPN23-204ENST00000477276 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
PTPN23-204ENST00000477276 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
PTPN23-204ENST00000477276 FAM182BQ5T319 152 aa24.09■■□□□ 1.45
PTPN23-204ENST00000477276 TNS1Q9HBL0 1735 aaKnown RBP24.09■■□□□ 1.45
PTPN23-204ENST00000477276 MEGF6O75095 1541 aa24.08■■□□□ 1.45
PTPN23-204ENST00000477276 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
PTPN23-204ENST00000477276 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
PTPN23-204ENST00000477276 PPM1GO15355 546 aaPredicted RBP24.06■■□□□ 1.44
PTPN23-204ENST00000477276 CDCA7Q9BWT1 371 aaPredicted RBP24.06■■□□□ 1.44
PTPN23-204ENST00000477276 RGPD1P0DJD0 1748 aa24.06■■□□□ 1.44
PTPN23-204ENST00000477276 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
PTPN23-204ENST00000477276 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
PTPN23-204ENST00000477276 IL2RBP14784 551 aa24.03■■□□□ 1.44
PTPN23-204ENST00000477276 DDB1Q16531 1140 aa24.03■■□□□ 1.44
PTPN23-204ENST00000477276 OVOS2A0A0G2JMS6 1433 aa24.02■■□□□ 1.44
PTPN23-204ENST00000477276 EIF4A2Q14240 407 aaKnown RBP24.02■■□□□ 1.44
PTPN23-204ENST00000477276 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
PTPN23-204ENST00000477276 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
PTPN23-204ENST00000477276 PDE3BQ13370 1112 aa24■■□□□ 1.43
PTPN23-204ENST00000477276 MARCH10Q8NA82 808 aaPredicted RBP24■■□□□ 1.43
PTPN23-204ENST00000477276 BCL9O00512 1426 aa23.99■■□□□ 1.43
PTPN23-204ENST00000477276 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
PTPN23-204ENST00000477276 EYA1Q99502 592 aa23.98■■□□□ 1.43
PTPN23-204ENST00000477276 IGSF1Q8N6C5 1336 aa23.96■■□□□ 1.43
PTPN23-204ENST00000477276 MTHFSP49914 203 aa23.96■■□□□ 1.43
PTPN23-204ENST00000477276 FAM196AQ6ZSG2 479 aa23.96■■□□□ 1.43
PTPN23-204ENST00000477276 EXOC5O00471 708 aa23.95■■□□□ 1.42
PTPN23-204ENST00000477276 NHSQ6T4R5 1651 aa23.95■■□□□ 1.42
PTPN23-204ENST00000477276 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
PTPN23-204ENST00000477276 DDX10Q13206 875 aaKnown RBP23.94■■□□□ 1.42
PTPN23-204ENST00000477276 IL13P35225 146 aa23.92■■□□□ 1.42
PTPN23-204ENST00000477276 CCDC125Q86Z20 511 aa23.92■■□□□ 1.42
PTPN23-204ENST00000477276 DOT1LQ8TEK3 1739 aa23.92■■□□□ 1.42
PTPN23-204ENST00000477276 TRIM37O94972 964 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms