RNA–Protein interactions for RNA: ENST00000477188.1

MMACHC-202, Transcript of methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria, humanhuman

TSL 3

Gene MMACHC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMACHC-202ENST00000477188 DDB1Q16531 1140 aa17.22■□□□□ 0.35
MMACHC-202ENST00000477188 PROM2Q8N271 834 aa17.22■□□□□ 0.35
MMACHC-202ENST00000477188 CHD4Q14839 1912 aa17.21■□□□□ 0.35
MMACHC-202ENST00000477188 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
MMACHC-202ENST00000477188 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
MMACHC-202ENST00000477188 QRICH2Q9H0J4 1663 aa17.2■□□□□ 0.34
MMACHC-202ENST00000477188 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
MMACHC-202ENST00000477188 MARCH10Q8NA82 808 aaPredicted RBP17.2■□□□□ 0.34
MMACHC-202ENST00000477188 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
MMACHC-202ENST00000477188 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
MMACHC-202ENST00000477188 CABP2Q9NPB3 220 aa17.19■□□□□ 0.34
MMACHC-202ENST00000477188 USP6P35125 1406 aa17.19■□□□□ 0.34
MMACHC-202ENST00000477188 FHDC1Q9C0D6 1143 aaPredicted RBP17.18■□□□□ 0.34
MMACHC-202ENST00000477188 NLRP6P59044 892 aa17.17■□□□□ 0.34
MMACHC-202ENST00000477188 CPSF1Q10570 1443 aaKnown RBP17.17■□□□□ 0.34
MMACHC-202ENST00000477188 WDR17Q8IZU2 1322 aa17.17■□□□□ 0.34
MMACHC-202ENST00000477188 BCL9O00512 1426 aa17.16■□□□□ 0.34
MMACHC-202ENST00000477188 STK32BQ9NY57 414 aa17.16■□□□□ 0.34
MMACHC-202ENST00000477188 AXIN2Q9Y2T1 843 aa17.16■□□□□ 0.34
MMACHC-202ENST00000477188 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
MMACHC-202ENST00000477188 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
MMACHC-202ENST00000477188 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
MMACHC-202ENST00000477188 SYT17Q9BSW7 474 aa17.15■□□□□ 0.34
MMACHC-202ENST00000477188 NHSQ6T4R5 1651 aa17.15■□□□□ 0.34
MMACHC-202ENST00000477188 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
MMACHC-202ENST00000477188 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
MMACHC-202ENST00000477188 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
MMACHC-202ENST00000477188 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
MMACHC-202ENST00000477188 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
MMACHC-202ENST00000477188 TRPM1Q7Z4N2 1603 aa17.12■□□□□ 0.33
MMACHC-202ENST00000477188 SOX12O15370 315 aa17.12■□□□□ 0.33
MMACHC-202ENST00000477188 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
MMACHC-202ENST00000477188 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
MMACHC-202ENST00000477188 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
MMACHC-202ENST00000477188 BTAF1O14981 1849 aa17.1■□□□□ 0.33
MMACHC-202ENST00000477188 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
MMACHC-202ENST00000477188 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
MMACHC-202ENST00000477188 NFAT5O94916 1531 aa17.1■□□□□ 0.33
MMACHC-202ENST00000477188 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
MMACHC-202ENST00000477188 CARD10Q9BWT7 1032 aa17.09■□□□□ 0.33
MMACHC-202ENST00000477188 ABCC6O95255 1503 aa17.08■□□□□ 0.32
MMACHC-202ENST00000477188 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.32
MMACHC-202ENST00000477188 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
MMACHC-202ENST00000477188 EXOC5O00471 708 aa17.06■□□□□ 0.32
MMACHC-202ENST00000477188 ARXQ96QS3 562 aa17.06■□□□□ 0.32
MMACHC-202ENST00000477188 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
MMACHC-202ENST00000477188 KAT6BQ8WYB5 2073 aa17.06■□□□□ 0.32
MMACHC-202ENST00000477188 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
MMACHC-202ENST00000477188 TTC21BQ7Z4L5 1316 aa17.05■□□□□ 0.32
MMACHC-202ENST00000477188 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
MMACHC-202ENST00000477188 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
MMACHC-202ENST00000477188 CCDC7Q96M83 1385 aa17.04■□□□□ 0.32
MMACHC-202ENST00000477188 LTN1O94822 1766 aa17.03■□□□□ 0.32
MMACHC-202ENST00000477188 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
MMACHC-202ENST00000477188 QSER1Q2KHR3 1735 aa17.02■□□□□ 0.32
MMACHC-202ENST00000477188 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
MMACHC-202ENST00000477188 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
MMACHC-202ENST00000477188 GPR162Q16538 588 aa17.01■□□□□ 0.31
MMACHC-202ENST00000477188 KLHL34Q8N239 644 aa17.01■□□□□ 0.31
MMACHC-202ENST00000477188 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
MMACHC-202ENST00000477188 COL24A1Q17RW2 1714 aa17■□□□□ 0.31
MMACHC-202ENST00000477188 LRRC4BQ9NT99 713 aa17■□□□□ 0.31
MMACHC-202ENST00000477188 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
MMACHC-202ENST00000477188 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
MMACHC-202ENST00000477188 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
MMACHC-202ENST00000477188 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
MMACHC-202ENST00000477188 TTC21AQ8NDW8 1320 aa16.98■□□□□ 0.31
MMACHC-202ENST00000477188 ERBB3P21860 1342 aa16.97■□□□□ 0.31
MMACHC-202ENST00000477188 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
MMACHC-202ENST00000477188 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
MMACHC-202ENST00000477188 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
MMACHC-202ENST00000477188 IL2RBP14784 551 aa16.95■□□□□ 0.3
MMACHC-202ENST00000477188 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
MMACHC-202ENST00000477188 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
MMACHC-202ENST00000477188 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
MMACHC-202ENST00000477188 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
MMACHC-202ENST00000477188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
MMACHC-202ENST00000477188 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
MMACHC-202ENST00000477188 KCNQ4P56696 695 aa16.93■□□□□ 0.3
MMACHC-202ENST00000477188 POLD1P28340 1107 aa16.92■□□□□ 0.3
MMACHC-202ENST00000477188 NME9Q86XW9 330 aa16.92■□□□□ 0.3
MMACHC-202ENST00000477188 LY75O60449 1722 aa16.92■□□□□ 0.3
MMACHC-202ENST00000477188 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
MMACHC-202ENST00000477188 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
MMACHC-202ENST00000477188 CD163L1Q9NR16 1453 aa16.9■□□□□ 0.3
MMACHC-202ENST00000477188 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.3
MMACHC-202ENST00000477188 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
MMACHC-202ENST00000477188 YBX3P16989 372 aaKnown RBP eCLIP16.89■□□□□ 0.29
MMACHC-202ENST00000477188 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
MMACHC-202ENST00000477188 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
MMACHC-202ENST00000477188 L3MBTL2Q969R5 705 aa16.89■□□□□ 0.29
MMACHC-202ENST00000477188 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
MMACHC-202ENST00000477188 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
MMACHC-202ENST00000477188 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
MMACHC-202ENST00000477188 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
MMACHC-202ENST00000477188 NSD2O96028 1365 aa16.87■□□□□ 0.29
MMACHC-202ENST00000477188 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
MMACHC-202ENST00000477188 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
MMACHC-202ENST00000477188 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
MMACHC-202ENST00000477188 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms