RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 FYB1O15117 783 aa17.4■□□□□ 0.38
FDPS-211ENST00000477057 LARP1Q6PKG0 1096 aaKnown RBP17.4■□□□□ 0.38
FDPS-211ENST00000477057 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
FDPS-211ENST00000477057 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
FDPS-211ENST00000477057 LTN1O94822 1766 aa17.4■□□□□ 0.38
FDPS-211ENST00000477057 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.37
FDPS-211ENST00000477057 AMPHP49418 695 aa17.39■□□□□ 0.37
FDPS-211ENST00000477057 SPATA31A5Q5VU36 1347 aa17.39■□□□□ 0.37
FDPS-211ENST00000477057 SPATA31A7Q8IWB4 1347 aa17.39■□□□□ 0.37
FDPS-211ENST00000477057 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
FDPS-211ENST00000477057 SEPT12Q8IYM1 358 aa17.38■□□□□ 0.37
FDPS-211ENST00000477057 FBLN1P23142 703 aa17.37■□□□□ 0.37
FDPS-211ENST00000477057 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
FDPS-211ENST00000477057 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
FDPS-211ENST00000477057 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
FDPS-211ENST00000477057 RGPD5Q99666 1765 aa17.36■□□□□ 0.37
FDPS-211ENST00000477057 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
FDPS-211ENST00000477057 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
FDPS-211ENST00000477057 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
FDPS-211ENST00000477057 SPATA31A1Q5TZJ5 1347 aa17.36■□□□□ 0.37
FDPS-211ENST00000477057 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
FDPS-211ENST00000477057 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
FDPS-211ENST00000477057 CRB1P82279 1406 aa17.35■□□□□ 0.37
FDPS-211ENST00000477057 COL18A1P39060 1754 aa17.34■□□□□ 0.37
FDPS-211ENST00000477057 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
FDPS-211ENST00000477057 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
FDPS-211ENST00000477057 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
FDPS-211ENST00000477057 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
FDPS-211ENST00000477057 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
FDPS-211ENST00000477057 ABCC6O95255 1503 aa17.32■□□□□ 0.36
FDPS-211ENST00000477057 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
FDPS-211ENST00000477057 KRT27Q7Z3Y8 459 aa17.31■□□□□ 0.36
FDPS-211ENST00000477057 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
FDPS-211ENST00000477057 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
FDPS-211ENST00000477057 ERBB3P21860 1342 aa17.3■□□□□ 0.36
FDPS-211ENST00000477057 HOXC9P31274 260 aa17.3■□□□□ 0.36
FDPS-211ENST00000477057 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
FDPS-211ENST00000477057 IP6K1Q92551 441 aa17.3■□□□□ 0.36
FDPS-211ENST00000477057 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
FDPS-211ENST00000477057 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
FDPS-211ENST00000477057 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
FDPS-211ENST00000477057 NSD2O96028 1365 aa17.28■□□□□ 0.36
FDPS-211ENST00000477057 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
FDPS-211ENST00000477057 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
FDPS-211ENST00000477057 THRAP3Q9Y2W1 955 aaKnown RBP17.28■□□□□ 0.36
FDPS-211ENST00000477057 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
FDPS-211ENST00000477057 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
FDPS-211ENST00000477057 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
FDPS-211ENST00000477057 BARGINQ6ZT62 677 aa17.27■□□□□ 0.36
FDPS-211ENST00000477057 FLT4P35916 1363 aa17.27■□□□□ 0.35
FDPS-211ENST00000477057 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
FDPS-211ENST00000477057 CARD10Q9BWT7 1032 aa17.26■□□□□ 0.35
FDPS-211ENST00000477057 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
FDPS-211ENST00000477057 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
FDPS-211ENST00000477057 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
FDPS-211ENST00000477057 SF3B2Q13435 895 aaKnown RBP17.23■□□□□ 0.35
FDPS-211ENST00000477057 DDB1Q16531 1140 aa17.23■□□□□ 0.35
FDPS-211ENST00000477057 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
FDPS-211ENST00000477057 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
FDPS-211ENST00000477057 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
FDPS-211ENST00000477057 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
FDPS-211ENST00000477057 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
FDPS-211ENST00000477057 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
FDPS-211ENST00000477057 CDCA7Q9BWT1 371 aaPredicted RBP17.21■□□□□ 0.35
FDPS-211ENST00000477057 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
FDPS-211ENST00000477057 INSRP06213 1382 aa17.2■□□□□ 0.34
FDPS-211ENST00000477057 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
FDPS-211ENST00000477057 IL2RBP14784 551 aa17.2■□□□□ 0.34
FDPS-211ENST00000477057 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
FDPS-211ENST00000477057 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
FDPS-211ENST00000477057 EXOC5O00471 708 aa17.18■□□□□ 0.34
FDPS-211ENST00000477057 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
FDPS-211ENST00000477057 DISP2A7MBM2 1401 aa17.16■□□□□ 0.34
FDPS-211ENST00000477057 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
FDPS-211ENST00000477057 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
FDPS-211ENST00000477057 RAPGEF4Q8WZA2 1011 aa17.16■□□□□ 0.34
FDPS-211ENST00000477057 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
FDPS-211ENST00000477057 OVOS2A0A0G2JMS6 1433 aa17.15■□□□□ 0.34
FDPS-211ENST00000477057 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
FDPS-211ENST00000477057 TRIM37O94972 964 aa17.14■□□□□ 0.33
FDPS-211ENST00000477057 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
FDPS-211ENST00000477057 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
FDPS-211ENST00000477057 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
FDPS-211ENST00000477057 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
FDPS-211ENST00000477057 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
FDPS-211ENST00000477057 MEGF6O75095 1541 aa17.12■□□□□ 0.33
FDPS-211ENST00000477057 MTHFSP49914 203 aa17.12■□□□□ 0.33
FDPS-211ENST00000477057 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
FDPS-211ENST00000477057 BAG6P46379 1132 aa17.11■□□□□ 0.33
FDPS-211ENST00000477057 DEFB132Q7Z7B7 95 aa17.11■□□□□ 0.33
FDPS-211ENST00000477057 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
FDPS-211ENST00000477057 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
FDPS-211ENST00000477057 EYA1Q99502 592 aa17.1■□□□□ 0.33
FDPS-211ENST00000477057 ZCRB1Q8TBF4 217 aaKnown RBP17.09■□□□□ 0.33
FDPS-211ENST00000477057 ACSBG1Q96GR2 724 aa17.09■□□□□ 0.33
FDPS-211ENST00000477057 APBA3O96018 575 aa17.08■□□□□ 0.32
FDPS-211ENST00000477057 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
FDPS-211ENST00000477057 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
FDPS-211ENST00000477057 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
FDPS-211ENST00000477057 TNS1Q9HBL0 1735 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms