RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZBTB7AO95365 584 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 PTGER2P43116 358 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 TOM1L2Q6ZVM7 507 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
BRCA1-213ENST00000476777 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 BCL9O00512 1426 aa16.58■□□□□ 0.24
BRCA1-213ENST00000476777 NLRP6P59044 892 aa16.57■□□□□ 0.24
BRCA1-213ENST00000476777 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
BRCA1-213ENST00000476777 SLIT3O75094 1523 aa16.56■□□□□ 0.24
BRCA1-213ENST00000476777 USP6P35125 1406 aa16.56■□□□□ 0.24
BRCA1-213ENST00000476777 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-213ENST00000476777 COL18A1P39060 1754 aa16.56■□□□□ 0.24
BRCA1-213ENST00000476777 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
BRCA1-213ENST00000476777 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
BRCA1-213ENST00000476777 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-213ENST00000476777 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
BRCA1-213ENST00000476777 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
BRCA1-213ENST00000476777 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
BRCA1-213ENST00000476777 MYOM1P52179 1685 aa16.54■□□□□ 0.24
BRCA1-213ENST00000476777 GOLGB1Q14789 3259 aaKnown RBP16.53■□□□□ 0.24
BRCA1-213ENST00000476777 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
BRCA1-213ENST00000476777 SYT17Q9BSW7 474 aa16.53■□□□□ 0.24
BRCA1-213ENST00000476777 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
BRCA1-213ENST00000476777 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
BRCA1-213ENST00000476777 SLC15A2Q16348 729 aa16.52■□□□□ 0.24
BRCA1-213ENST00000476777 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
BRCA1-213ENST00000476777 ARHGEF25Q86VW2 580 aa16.51■□□□□ 0.23
BRCA1-213ENST00000476777 SGIP1Q9BQI5 828 aa16.51■□□□□ 0.23
BRCA1-213ENST00000476777 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
BRCA1-213ENST00000476777 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
BRCA1-213ENST00000476777 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
BRCA1-213ENST00000476777 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
BRCA1-213ENST00000476777 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
BRCA1-213ENST00000476777 MTFR1LQ9H019 292 aa16.49■□□□□ 0.23
BRCA1-213ENST00000476777 CHD4Q14839 1912 aa16.49■□□□□ 0.23
BRCA1-213ENST00000476777 EXOC5O00471 708 aa16.48■□□□□ 0.23
BRCA1-213ENST00000476777 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
BRCA1-213ENST00000476777 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
BRCA1-213ENST00000476777 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
BRCA1-213ENST00000476777 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.23
BRCA1-213ENST00000476777 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
BRCA1-213ENST00000476777 SOX12O15370 315 aa16.45■□□□□ 0.22
BRCA1-213ENST00000476777 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
BRCA1-213ENST00000476777 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
BRCA1-213ENST00000476777 ARXQ96QS3 562 aa16.44■□□□□ 0.22
BRCA1-213ENST00000476777 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
BRCA1-213ENST00000476777 TNS2Q63HR2 1409 aa16.44■□□□□ 0.22
BRCA1-213ENST00000476777 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
BRCA1-213ENST00000476777 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
BRCA1-213ENST00000476777 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
BRCA1-213ENST00000476777 C1QTNF8P60827 252 aa16.43■□□□□ 0.22
BRCA1-213ENST00000476777 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
BRCA1-213ENST00000476777 NFAT5O94916 1531 aa16.43■□□□□ 0.22
BRCA1-213ENST00000476777 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
BRCA1-213ENST00000476777 TTC21AQ8NDW8 1320 aa16.42■□□□□ 0.22
BRCA1-213ENST00000476777 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
BRCA1-213ENST00000476777 PAPPAQ13219 1627 aa16.41■□□□□ 0.22
BRCA1-213ENST00000476777 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
BRCA1-213ENST00000476777 ABCC6O95255 1503 aa16.4■□□□□ 0.22
BRCA1-213ENST00000476777 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
BRCA1-213ENST00000476777 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
BRCA1-213ENST00000476777 ERBB3P21860 1342 aa16.37■□□□□ 0.21
BRCA1-213ENST00000476777 BTAF1O14981 1849 aa16.36■□□□□ 0.21
BRCA1-213ENST00000476777 IL2RBP14784 551 aa16.36■□□□□ 0.21
BRCA1-213ENST00000476777 GPR162Q16538 588 aa16.36■□□□□ 0.21
BRCA1-213ENST00000476777 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
BRCA1-213ENST00000476777 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
BRCA1-213ENST00000476777 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
BRCA1-213ENST00000476777 USP31Q70CQ4 1352 aa16.34■□□□□ 0.21
BRCA1-213ENST00000476777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.2
BRCA1-213ENST00000476777 SLC16A10Q8TF71 515 aa16.33■□□□□ 0.2
BRCA1-213ENST00000476777 GIGYF1O75420 1035 aaPredicted RBP16.32■□□□□ 0.2
BRCA1-213ENST00000476777 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 POLD1P28340 1107 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 NME9Q86XW9 330 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 ANKRD24Q8TF21 1146 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
BRCA1-213ENST00000476777 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
BRCA1-213ENST00000476777 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
BRCA1-213ENST00000476777 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
BRCA1-213ENST00000476777 SBNO2Q9Y2G9 1366 aa16.29■□□□□ 0.2
BRCA1-213ENST00000476777 LTN1O94822 1766 aa16.29■□□□□ 0.2
BRCA1-213ENST00000476777 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
BRCA1-213ENST00000476777 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
BRCA1-213ENST00000476777 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
BRCA1-213ENST00000476777 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
BRCA1-213ENST00000476777 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
BRCA1-213ENST00000476777 KCNQ4P56696 695 aa16.27■□□□□ 0.2
BRCA1-213ENST00000476777 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
BRCA1-213ENST00000476777 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
BRCA1-213ENST00000476777 SHANK3Q9BYB0 1731 aa16.26■□□□□ 0.19
BRCA1-213ENST00000476777 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
BRCA1-213ENST00000476777 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
BRCA1-213ENST00000476777 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
BRCA1-213ENST00000476777 IP6K1Q92551 441 aa16.24■□□□□ 0.19
BRCA1-213ENST00000476777 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
BRCA1-213ENST00000476777 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms