RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	GIGYF1	O75420	1035 aa	Predicted RBP	10.41	□□□□□ -0.74
USP37-208	ENST00000475553	PPP1R15A	O75807	674 aa	Predicted RBP	10.41	□□□□□ -0.74
USP37-208	ENST00000475553	RAB15	P59190	212 aa		10.41	□□□□□ -0.74
USP37-208	ENST00000475553	ZNF697	Q5TEC3	545 aa		10.41	□□□□□ -0.74
USP37-208	ENST00000475553	TRIM52	Q96A61	297 aa		10.41	□□□□□ -0.74
USP37-208	ENST00000475553	KCTD15	Q96SI1	283 aa	Predicted RBP	10.41	□□□□□ -0.74
USP37-208	ENST00000475553	PIK3CD	O00329	1044 aa		10.4	□□□□□ -0.74
USP37-208	ENST00000475553	WNT7A	O00755	349 aa		10.4	□□□□□ -0.74
USP37-208	ENST00000475553	MAP7D1	Q3KQU3	841 aa		10.4	□□□□□ -0.74
USP37-208	ENST00000475553	ZNF598	Q86UK7	904 aa	Known RBP	10.4	□□□□□ -0.74
USP37-208	ENST00000475553	CCDC125	Q86Z20	511 aa		10.4	□□□□□ -0.74
USP37-208	ENST00000475553	ESF1	Q9H501	851 aa	Known RBP	10.4	□□□□□ -0.74
USP37-208	ENST00000475553	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.4	□□□□□ -0.74
USP37-208	ENST00000475553		V9GY48	417 aa	Predicted RBP	10.4	□□□□□ -0.74
USP37-208	ENST00000475553	FOXC1	Q12948	553 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	CFAP70	Q5T0N1	1121 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	SEPT12	Q8IYM1	358 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	PLPP7	Q8NBV4	271 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	PBXIP1	Q96AQ6	731 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	DOLK	Q9UPQ8	538 aa		10.39	□□□□□ -0.75
USP37-208	ENST00000475553	USP17L5	A8MUK1	530 aa		10.38	□□□□□ -0.75
USP37-208	ENST00000475553	LZTS3	O60299	673 aa	Predicted RBP	10.38	□□□□□ -0.75
USP37-208	ENST00000475553	EMID1	Q96A84	441 aa	Predicted RBP	10.38	□□□□□ -0.75
USP37-208	ENST00000475553	MAP4K5	Q9Y4K4	846 aa		10.38	□□□□□ -0.75
USP37-208	ENST00000475553	MRGPRX2	Q96LB1	330 aa		10.37	□□□□□ -0.75
USP37-208	ENST00000475553	VRTN	Q9H8Y1	702 aa		10.37	□□□□□ -0.75
USP37-208	ENST00000475553	USP17L3	A6NCW0	530 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	USP17L4	A6NCW7	530 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	EML3	Q32P44	896 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	USP17L2	Q6R6M4	530 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	USP17L1	Q7RTZ2	530 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	DEPDC4	Q8N2C3	294 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	PHTF2	Q8N3S3	785 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	TLL2	Q9Y6L7	1015 aa		10.36	□□□□□ -0.75
USP37-208	ENST00000475553	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.35	□□□□□ -0.75
USP37-208	ENST00000475553	DHX9	Q08211	1270 aa	Known RBP	10.35	□□□□□ -0.75
USP37-208	ENST00000475553	SIRT1	Q96EB6	747 aa		10.35	□□□□□ -0.75
USP37-208	ENST00000475553	CDK15	Q96Q40	435 aa		10.35	□□□□□ -0.75
USP37-208	ENST00000475553	PCDHB11	Q9Y5F2	797 aa		10.35	□□□□□ -0.75
USP37-208	ENST00000475553	ESPN	B1AK53	854 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	FSHR	P23945	695 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	NCOA4	Q13772	614 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	CDCA8	Q53HL2	280 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	OXLD1	Q5BKU9	147 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	PLEKHM2	Q8IWE5	1019 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	MPND	Q8N594	471 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	WASF2	Q9Y6W5	498 aa		10.34	□□□□□ -0.75
USP37-208	ENST00000475553	ALDH1A1	P00352	501 aa		10.33	□□□□□ -0.76
USP37-208	ENST00000475553	MYC	P01106	439 aa	Predicted RBP	10.33	□□□□□ -0.76
USP37-208	ENST00000475553	NOD1	Q9Y239	953 aa		10.33	□□□□□ -0.76
USP37-208	ENST00000475553	TTC24	A2A3L6	582 aa	Predicted RBP	10.32	□□□□□ -0.76
USP37-208	ENST00000475553	SIAH2	O43255	324 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	ADH1C	P00326	375 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	USP4	Q13107	963 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	NR5A1	Q13285	461 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	INTS6L	Q5JSJ4	861 aa	Known RBP	10.32	□□□□□ -0.76
USP37-208	ENST00000475553	TRIM50	Q86XT4	487 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	CYP4X1	Q8N118	509 aa		10.32	□□□□□ -0.76
USP37-208	ENST00000475553	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.32	□□□□□ -0.76
USP37-208	ENST00000475553	MKRN1	Q9UHC7	482 aa	Known RBP	10.32	□□□□□ -0.76
USP37-208	ENST00000475553	ATP5J2-PTCD1	G3V325	749 aa		10.31	□□□□□ -0.76
USP37-208	ENST00000475553	RGS20	O76081	388 aa		10.31	□□□□□ -0.76
USP37-208	ENST00000475553	CSB-PGBD3	P0DP91	1061 aa		10.31	□□□□□ -0.76
USP37-208	ENST00000475553	PDE4C	Q08493	712 aa		10.31	□□□□□ -0.76
USP37-208	ENST00000475553	LARP1	Q6PKG0	1096 aa	Known RBP	10.31	□□□□□ -0.76
USP37-208	ENST00000475553	TSGA10IP	Q3SY00	556 aa		10.3	□□□□□ -0.76
USP37-208	ENST00000475553	CCDC116	Q8IYX3	515 aa		10.3	□□□□□ -0.76
USP37-208	ENST00000475553	SNIP1	Q8TAD8	396 aa	Known RBP	10.3	□□□□□ -0.76
USP37-208	ENST00000475553	CHIC2	Q9UKJ5	165 aa		10.3	□□□□□ -0.76
USP37-208	ENST00000475553	RBM19	Q9Y4C8	960 aa	Known RBP	10.3	□□□□□ -0.76
USP37-208	ENST00000475553	ERVH48-1	M5A8F1	160 aa		10.29	□□□□□ -0.76
USP37-208	ENST00000475553	RASA1	P20936	1047 aa		10.29	□□□□□ -0.76
USP37-208	ENST00000475553	GRM5	P41594	1212 aa		10.29	□□□□□ -0.76
USP37-208	ENST00000475553	ATP1A2	P50993	1020 aa		10.29	□□□□□ -0.76
USP37-208	ENST00000475553	TRAF7	Q6Q0C0	670 aa		10.29	□□□□□ -0.76
USP37-208	ENST00000475553	TNFRSF10A	O00220	468 aa		10.28	□□□□□ -0.76
USP37-208	ENST00000475553	PSME1	Q06323	249 aa		10.28	□□□□□ -0.76
USP37-208	ENST00000475553	PGPEP1	Q9NXJ5	209 aa		10.28	□□□□□ -0.76
USP37-208	ENST00000475553	PKD2L1	Q9P0L9	805 aa		10.28	□□□□□ -0.76
USP37-208	ENST00000475553	PDIA4	P13667	645 aa	Known RBP	10.27	□□□□□ -0.77
USP37-208	ENST00000475553	KANK4	Q5T7N3	995 aa	Predicted RBP	10.27	□□□□□ -0.77
USP37-208	ENST00000475553	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.26	□□□□□ -0.77
USP37-208	ENST00000475553	EMILIN1	Q9Y6C2	1016 aa		10.26	□□□□□ -0.77
USP37-208	ENST00000475553	ATG7	O95352	703 aa		10.25	□□□□□ -0.77
USP37-208	ENST00000475553	MYT1	Q01538	1121 aa		10.25	□□□□□ -0.77
USP37-208	ENST00000475553	NNT	Q13423	1086 aa		10.25	□□□□□ -0.77
USP37-208	ENST00000475553	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.25	□□□□□ -0.77
USP37-208	ENST00000475553	OGFOD1	Q8N543	542 aa		10.25	□□□□□ -0.77
USP37-208	ENST00000475553	DNAAF2	Q9NVR5	837 aa	Known RBP	10.25	□□□□□ -0.77
USP37-208	ENST00000475553	GDF9	O60383	454 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	GTF2I	P78347	998 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	SRPK2	P78362	688 aa	Known RBP	10.24	□□□□□ -0.77
USP37-208	ENST00000475553	CC2D2B	Q6DHV5	1058 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	RETREG2	Q8NC44	543 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	CYLD	Q9NQC7	956 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	TMPRSS4	Q9NRS4	437 aa		10.24	□□□□□ -0.77
USP37-208	ENST00000475553	FAM196B	A6NMK8	535 aa		10.23	□□□□□ -0.77
USP37-208	ENST00000475553	ZNF594	Q96JF6	807 aa	Predicted RBP	10.23	□□□□□ -0.77
USP37-208	ENST00000475553	USP17L15	C9J2P7	530 aa		10.22	□□□□□ -0.77
USP37-208	ENST00000475553	USP17L10	C9JJH3	530 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms