RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
HLA-DOB-208ENST00000475235 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
HLA-DOB-208ENST00000475235 ZBTB7CA1YPR0 619 aa16.07■□□□□ 0.16
HLA-DOB-208ENST00000475235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
HLA-DOB-208ENST00000475235 LMO7Q8WWI1 1683 aa16.06■□□□□ 0.16
HLA-DOB-208ENST00000475235 BARGINQ6ZT62 677 aa16.06■□□□□ 0.16
HLA-DOB-208ENST00000475235 COL5A2P05997 1499 aaPredicted RBP16.06■□□□□ 0.16
HLA-DOB-208ENST00000475235 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 ARHGEF25Q86VW2 580 aa16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 THRAP3Q9Y2W1 955 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-208ENST00000475235 TCP11L2Q8N4U5 519 aa16.04■□□□□ 0.16
HLA-DOB-208ENST00000475235 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
HLA-DOB-208ENST00000475235 SOX12O15370 315 aa16.04■□□□□ 0.16
HLA-DOB-208ENST00000475235 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-208ENST00000475235 NME9Q86XW9 330 aa16.04■□□□□ 0.16
HLA-DOB-208ENST00000475235 CRB1P82279 1406 aa16.03■□□□□ 0.16
HLA-DOB-208ENST00000475235 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
HLA-DOB-208ENST00000475235 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.15
HLA-DOB-208ENST00000475235 NFAT5O94916 1531 aa16.01■□□□□ 0.15
HLA-DOB-208ENST00000475235 EP400Q96L91 3159 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 TOM1L2Q6ZVM7 507 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 ABCC6O95255 1503 aa16■□□□□ 0.15
HLA-DOB-208ENST00000475235 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
HLA-DOB-208ENST00000475235 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
HLA-DOB-208ENST00000475235 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
HLA-DOB-208ENST00000475235 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
HLA-DOB-208ENST00000475235 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
HLA-DOB-208ENST00000475235 CSB-PGBD3P0DP91 1061 aa15.98■□□□□ 0.15
HLA-DOB-208ENST00000475235 FAM196AQ6ZSG2 479 aa15.98■□□□□ 0.15
HLA-DOB-208ENST00000475235 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
HLA-DOB-208ENST00000475235 COG3Q96JB2 828 aa15.98■□□□□ 0.15
HLA-DOB-208ENST00000475235 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
HLA-DOB-208ENST00000475235 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
HLA-DOB-208ENST00000475235 CDCA7Q9BWT1 371 aaPredicted RBP15.97■□□□□ 0.15
HLA-DOB-208ENST00000475235 COL18A1P39060 1754 aa15.96■□□□□ 0.14
HLA-DOB-208ENST00000475235 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
HLA-DOB-208ENST00000475235 BAG6P46379 1132 aa15.95■□□□□ 0.14
HLA-DOB-208ENST00000475235 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
HLA-DOB-208ENST00000475235 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
HLA-DOB-208ENST00000475235 CCDC7Q96M83 1385 aa15.94■□□□□ 0.14
HLA-DOB-208ENST00000475235 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
HLA-DOB-208ENST00000475235 ERBB3P21860 1342 aa15.93■□□□□ 0.14
HLA-DOB-208ENST00000475235 DDB1Q16531 1140 aa15.93■□□□□ 0.14
HLA-DOB-208ENST00000475235 FYB1O15117 783 aa15.91■□□□□ 0.14
HLA-DOB-208ENST00000475235 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
HLA-DOB-208ENST00000475235 IP6K1Q92551 441 aa15.91■□□□□ 0.14
HLA-DOB-208ENST00000475235 HOMEZQ8IX15 550 aa15.9■□□□□ 0.14
HLA-DOB-208ENST00000475235 ANKRD24Q8TF21 1146 aa15.9■□□□□ 0.14
HLA-DOB-208ENST00000475235 PARP4Q9UKK3 1724 aaKnown RBP15.9■□□□□ 0.14
HLA-DOB-208ENST00000475235 DISP2A7MBM2 1401 aa15.9■□□□□ 0.14
HLA-DOB-208ENST00000475235 GGNBP2Q9H3C7 697 aa15.89■□□□□ 0.13
HLA-DOB-208ENST00000475235 NLRP2Q9NX02 1062 aa15.89■□□□□ 0.13
HLA-DOB-208ENST00000475235 OVOS2A0A0G2JMS6 1433 aa15.89■□□□□ 0.13
HLA-DOB-208ENST00000475235 TRIM37O94972 964 aa15.89■□□□□ 0.13
HLA-DOB-208ENST00000475235 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
HLA-DOB-208ENST00000475235 MAP3K19Q56UN5 1328 aa15.88■□□□□ 0.13
HLA-DOB-208ENST00000475235 AMPHP49418 695 aa15.88■□□□□ 0.13
HLA-DOB-208ENST00000475235 POLR3GLQ9BT43 218 aa15.88■□□□□ 0.13
HLA-DOB-208ENST00000475235 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
HLA-DOB-208ENST00000475235 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
HLA-DOB-208ENST00000475235 EXOC5O00471 708 aa15.87■□□□□ 0.13
HLA-DOB-208ENST00000475235 HOXC9P31274 260 aa15.87■□□□□ 0.13
HLA-DOB-208ENST00000475235 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
HLA-DOB-208ENST00000475235 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
HLA-DOB-208ENST00000475235 EN1Q05925 392 aaPredicted RBP15.86■□□□□ 0.13
HLA-DOB-208ENST00000475235 LRRC37A3O60309 1634 aa15.86■□□□□ 0.13
HLA-DOB-208ENST00000475235 APBA3O96018 575 aa15.85■□□□□ 0.13
HLA-DOB-208ENST00000475235 IL2RBP14784 551 aa15.85■□□□□ 0.13
HLA-DOB-208ENST00000475235 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
HLA-DOB-208ENST00000475235 LTN1O94822 1766 aa15.85■□□□□ 0.13
HLA-DOB-208ENST00000475235 MYOM1P52179 1685 aa15.85■□□□□ 0.13
HLA-DOB-208ENST00000475235 BCL9O00512 1426 aa15.84■□□□□ 0.13
HLA-DOB-208ENST00000475235 KIF24Q5T7B8 1368 aa15.84■□□□□ 0.13
HLA-DOB-208ENST00000475235 TNS2Q63HR2 1409 aa15.84■□□□□ 0.13
HLA-DOB-208ENST00000475235 RRS1Q15050 365 aaKnown RBP15.84■□□□□ 0.13
HLA-DOB-208ENST00000475235 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
HLA-DOB-208ENST00000475235 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
HLA-DOB-208ENST00000475235 FBLN1P23142 703 aa15.83■□□□□ 0.12
HLA-DOB-208ENST00000475235 MARCH10Q8NA82 808 aaPredicted RBP15.83■□□□□ 0.12
HLA-DOB-208ENST00000475235 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
HLA-DOB-208ENST00000475235 RGPD5Q99666 1765 aa15.82■□□□□ 0.12
HLA-DOB-208ENST00000475235 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
HLA-DOB-208ENST00000475235 CAMKK2Q96RR4 588 aa15.82■□□□□ 0.12
HLA-DOB-208ENST00000475235 TNS1Q9HBL0 1735 aaKnown RBP15.81■□□□□ 0.12
HLA-DOB-208ENST00000475235 FLT4P35916 1363 aa15.81■□□□□ 0.12
HLA-DOB-208ENST00000475235 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
HLA-DOB-208ENST00000475235 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
HLA-DOB-208ENST00000475235 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
HLA-DOB-208ENST00000475235 PANK3Q9H999 370 aa15.79■□□□□ 0.12
HLA-DOB-208ENST00000475235 INSRP06213 1382 aa15.79■□□□□ 0.12
HLA-DOB-208ENST00000475235 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
HLA-DOB-208ENST00000475235 KIF20BQ96Q89 1820 aa15.79■□□□□ 0.12
HLA-DOB-208ENST00000475235 PODXL2Q9NZ53 605 aa15.78■□□□□ 0.12
HLA-DOB-208ENST00000475235 PLSCR1O15162 318 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms