RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
ATPAF2-206ENST00000474627 RGS12O14924 1447 aa26.73■■□□□ 1.87
ATPAF2-206ENST00000474627 GLI3P10071 1580 aa26.72■■□□□ 1.87
ATPAF2-206ENST00000474627 FBLN1P23142 703 aa26.71■■□□□ 1.87
ATPAF2-206ENST00000474627 SPATA31A5Q5VU36 1347 aa26.71■■□□□ 1.87
ATPAF2-206ENST00000474627 SPATA31A7Q8IWB4 1347 aa26.71■■□□□ 1.87
ATPAF2-206ENST00000474627 SOCS7O14512 581 aa26.71■■□□□ 1.87
ATPAF2-206ENST00000474627 LARP1Q6PKG0 1096 aaKnown RBP26.71■■□□□ 1.87
ATPAF2-206ENST00000474627 COL5A2P05997 1499 aaPredicted RBP26.7■■□□□ 1.86
ATPAF2-206ENST00000474627 COL18A1P39060 1754 aa26.69■■□□□ 1.86
ATPAF2-206ENST00000474627 KIF20BQ96Q89 1820 aa26.69■■□□□ 1.86
ATPAF2-206ENST00000474627 USP35Q9P2H5 1018 aa26.68■■□□□ 1.86
ATPAF2-206ENST00000474627 SPATA31A1Q5TZJ5 1347 aa26.68■■□□□ 1.86
ATPAF2-206ENST00000474627 FAM98CQ17RN3 349 aaKnown RBP26.67■■□□□ 1.86
ATPAF2-206ENST00000474627 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
ATPAF2-206ENST00000474627 CENPBP07199 599 aaPredicted RBP26.66■■□□□ 1.86
ATPAF2-206ENST00000474627 MAP3K19Q56UN5 1328 aa26.66■■□□□ 1.86
ATPAF2-206ENST00000474627 ONECUT3O60422 494 aaPredicted RBP26.65■■□□□ 1.86
ATPAF2-206ENST00000474627 A0A0G2JS52 829 aa26.64■■□□□ 1.86
ATPAF2-206ENST00000474627 MYT1Q01538 1121 aa26.64■■□□□ 1.86
ATPAF2-206ENST00000474627 RRS1Q15050 365 aaKnown RBP26.64■■□□□ 1.86
ATPAF2-206ENST00000474627 SEPT12Q8IYM1 358 aa26.64■■□□□ 1.86
ATPAF2-206ENST00000474627 CSB-PGBD3P0DP91 1061 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 LTN1O94822 1766 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 ABCC6O95255 1503 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 WDR17Q8IZU2 1322 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 AMPHP49418 695 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 TOM1L2Q6ZVM7 507 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 IP6K1Q92551 441 aa26.63■■□□□ 1.85
ATPAF2-206ENST00000474627 CRB1P82279 1406 aa26.61■■□□□ 1.85
ATPAF2-206ENST00000474627 TCP11L2Q8N4U5 519 aa26.6■■□□□ 1.85
ATPAF2-206ENST00000474627 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
ATPAF2-206ENST00000474627 HOXC9P31274 260 aa26.59■■□□□ 1.85
ATPAF2-206ENST00000474627 PER1O15534 1290 aaPredicted RBP26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 ANP32CO43423 234 aa26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 ANKRD24Q8TF21 1146 aa26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 NSD2O96028 1365 aa26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 ERBB3P21860 1342 aa26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 TNNT2P45379 298 aaPredicted RBP26.58■■□□□ 1.85
ATPAF2-206ENST00000474627 CCER2I3L3R5 266 aa26.57■■□□□ 1.84
ATPAF2-206ENST00000474627 BARGINQ6ZT62 677 aa26.57■■□□□ 1.84
ATPAF2-206ENST00000474627 THRAP3Q9Y2W1 955 aaKnown RBP26.57■■□□□ 1.84
ATPAF2-206ENST00000474627 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
ATPAF2-206ENST00000474627 AMER1Q5JTC6 1135 aaPredicted RBP26.56■■□□□ 1.84
ATPAF2-206ENST00000474627 LTV1Q96GA3 475 aaPredicted RBP26.56■■□□□ 1.84
ATPAF2-206ENST00000474627 MORC1Q86VD1 984 aa26.54■■□□□ 1.84
ATPAF2-206ENST00000474627 CARD10Q9BWT7 1032 aa26.54■■□□□ 1.84
ATPAF2-206ENST00000474627 EMILIN1Q9Y6C2 1016 aa26.54■■□□□ 1.84
ATPAF2-206ENST00000474627 RTL1A6NKG5 1358 aa26.54■■□□□ 1.84
ATPAF2-206ENST00000474627 NLRP2Q9NX02 1062 aa26.54■■□□□ 1.84
ATPAF2-206ENST00000474627 PPM1GO15355 546 aaPredicted RBP26.53■■□□□ 1.84
ATPAF2-206ENST00000474627 KRT27Q7Z3Y8 459 aa26.52■■□□□ 1.84
ATPAF2-206ENST00000474627 ANKRD26Q9UPS8 1709 aa26.52■■□□□ 1.84
ATPAF2-206ENST00000474627 HSP90AB2PQ58FF8 381 aa26.5■■□□□ 1.83
ATPAF2-206ENST00000474627 POLKQ9UBT6 870 aa26.5■■□□□ 1.83
ATPAF2-206ENST00000474627 THSD7AQ9UPZ6 1657 aa26.5■■□□□ 1.83
ATPAF2-206ENST00000474627 FLT4P35916 1363 aa26.5■■□□□ 1.83
ATPAF2-206ENST00000474627 CC2D1BQ5T0F9 858 aaKnown RBP26.5■■□□□ 1.83
ATPAF2-206ENST00000474627 KIF24Q5T7B8 1368 aa26.49■■□□□ 1.83
ATPAF2-206ENST00000474627 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
ATPAF2-206ENST00000474627 CNGB1Q14028 1251 aaPredicted RBP26.48■■□□□ 1.83
ATPAF2-206ENST00000474627 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
ATPAF2-206ENST00000474627 INSRP06213 1382 aa26.47■■□□□ 1.83
ATPAF2-206ENST00000474627 UPF1Q92900 1129 aaKnown RBP eCLIP26.46■■□□□ 1.83
ATPAF2-206ENST00000474627 PDE3BQ13370 1112 aa26.44■■□□□ 1.82
ATPAF2-206ENST00000474627 FAM182BQ5T319 152 aa26.44■■□□□ 1.82
ATPAF2-206ENST00000474627 CDCA7Q9BWT1 371 aaPredicted RBP26.44■■□□□ 1.82
ATPAF2-206ENST00000474627 SMG6Q86US8 1419 aaKnown RBP26.44■■□□□ 1.82
ATPAF2-206ENST00000474627 MAP2P11137 1827 aaKnown RBP26.43■■□□□ 1.82
ATPAF2-206ENST00000474627 NPC1L1Q9UHC9 1359 aa26.42■■□□□ 1.82
ATPAF2-206ENST00000474627 DDB1Q16531 1140 aa26.41■■□□□ 1.82
ATPAF2-206ENST00000474627 NBPF6Q5VWK0 638 aa26.41■■□□□ 1.82
ATPAF2-206ENST00000474627 NBPF4Q96M43 638 aa26.41■■□□□ 1.82
ATPAF2-206ENST00000474627 DISP2A7MBM2 1401 aa26.4■■□□□ 1.82
ATPAF2-206ENST00000474627 YTHDC1Q96MU7 727 aaKnown RBP26.4■■□□□ 1.82
ATPAF2-206ENST00000474627 IL2RBP14784 551 aa26.39■■□□□ 1.82
ATPAF2-206ENST00000474627 PARP4Q9UKK3 1724 aaKnown RBP26.38■■□□□ 1.81
ATPAF2-206ENST00000474627 FAM208AQ9UK61 1670 aaKnown RBP26.38■■□□□ 1.81
ATPAF2-206ENST00000474627 USHBP1Q8N6Y0 703 aa26.37■■□□□ 1.81
ATPAF2-206ENST00000474627 EXOC5O00471 708 aa26.37■■□□□ 1.81
ATPAF2-206ENST00000474627 WNK3Q9BYP7 1800 aa26.36■■□□□ 1.81
ATPAF2-206ENST00000474627 LRRC37A3O60309 1634 aa26.35■■□□□ 1.81
ATPAF2-206ENST00000474627 RGPD2P0DJD1 1756 aa26.34■■□□□ 1.81
ATPAF2-206ENST00000474627 MTHFSP49914 203 aa26.33■■□□□ 1.81
ATPAF2-206ENST00000474627 EIF4A2Q14240 407 aaKnown RBP26.33■■□□□ 1.81
ATPAF2-206ENST00000474627 FAM196AQ6ZSG2 479 aa26.33■■□□□ 1.81
ATPAF2-206ENST00000474627 EP400Q96L91 3159 aa26.33■■□□□ 1.81
ATPAF2-206ENST00000474627 CCDC125Q86Z20 511 aa26.31■■□□□ 1.8
ATPAF2-206ENST00000474627 MARCH10Q8NA82 808 aaPredicted RBP26.31■■□□□ 1.8
ATPAF2-206ENST00000474627 EYA1Q99502 592 aa26.31■■□□□ 1.8
ATPAF2-206ENST00000474627 TNS2Q63HR2 1409 aa26.29■■□□□ 1.8
ATPAF2-206ENST00000474627 RAPGEF4Q8WZA2 1011 aa26.29■■□□□ 1.8
ATPAF2-206ENST00000474627 PRKRIP1Q9H875 184 aaPredicted RBP26.29■■□□□ 1.8
ATPAF2-206ENST00000474627 MEGF6O75095 1541 aa26.27■■□□□ 1.8
ATPAF2-206ENST00000474627 OVOS2A0A0G2JMS6 1433 aa26.26■■□□□ 1.79
ATPAF2-206ENST00000474627 SF3B2Q13435 895 aaKnown RBP26.26■■□□□ 1.79
ATPAF2-206ENST00000474627 TRIM37O94972 964 aa26.25■■□□□ 1.79
ATPAF2-206ENST00000474627 TATP17735 454 aaPredicted RBP26.25■■□□□ 1.79
ATPAF2-206ENST00000474627 ZCRB1Q8TBF4 217 aaKnown RBP26.24■■□□□ 1.79
ATPAF2-206ENST00000474627 DDX54Q8TDD1 881 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms