RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NUTM2GQ5VZR2 741 aa7.56□□□□□ -1.2
SNRNP40-204ENST00000474025 LARP1Q6PKG0 1096 aaKnown RBP7.56□□□□□ -1.2
SNRNP40-204ENST00000474025 RAB3GAP2Q9H2M9 1393 aa7.56□□□□□ -1.2
SNRNP40-204ENST00000474025 USP19O94966 1318 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 ACEP12821 1306 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 C19orf67A6NJJ6 358 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 TCP11L2Q8N4U5 519 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 STAC3Q96MF2 364 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 KDM2AQ9Y2K7 1162 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 NINLQ9Y2I6 1382 aa7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 PARP4Q9UKK3 1724 aaKnown RBP7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 COL5A2P05997 1499 aaPredicted RBP7.55□□□□□ -1.2
SNRNP40-204ENST00000474025 EVA1CP58658 441 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 EVX2Q03828 476 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 NBPF8Q3BBV2 869 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 CDK19Q9BWU1 502 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 CCDC61Q9Y6R9 512 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 PEAK1Q9H792 1746 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 RGPD3A6NKT7 1758 aaPredicted RBP7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 RGPD4Q7Z3J3 1758 aa7.54□□□□□ -1.2
SNRNP40-204ENST00000474025 OVOS2A0A0G2JMS6 1433 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 OVOS2A0A0J9YW53 1432 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 OVOS2Q6IE36 1432 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 PLEKHG3A1L390 1219 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 SPDYE4A6NLX3 237 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 KCNQ2O43526 872 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 CHADLQ6NUI6 762 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 ABTB2Q8N961 1025 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 SPON1Q9HCB6 807 aa7.53□□□□□ -1.2
SNRNP40-204ENST00000474025 CRB1P82279 1406 aa7.52□□□□□ -1.2
SNRNP40-204ENST00000474025 C11orf95C9JLR9 678 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-204ENST00000474025 GCP02774 474 aa7.52□□□□□ -1.21
SNRNP40-204ENST00000474025 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-204ENST00000474025 LRRC37A3O60309 1634 aa7.52□□□□□ -1.21
SNRNP40-204ENST00000474025 CASZ1Q86V15 1759 aa7.51□□□□□ -1.21
SNRNP40-204ENST00000474025 SLIT3O75094 1523 aa7.51□□□□□ -1.21
SNRNP40-204ENST00000474025 PPIP5K1Q6PFW1 1433 aa7.51□□□□□ -1.21
SNRNP40-204ENST00000474025 KIAA1210Q9ULL0 1709 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 AATKQ6ZMQ8 1374 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 PLSCR1O15162 318 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 PTF1AQ7RTS3 328 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 NLRP13Q86W25 1043 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 SBF2Q86WG5 1849 aa7.5□□□□□ -1.21
SNRNP40-204ENST00000474025 BRD4O60885 1362 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-204ENST00000474025 BCL11BQ9C0K0 894 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-204ENST00000474025 PDGFDQ9GZP0 370 aaPredicted RBP7.49□□□□□ -1.21
SNRNP40-204ENST00000474025 BCL9O00512 1426 aa7.49□□□□□ -1.21
SNRNP40-204ENST00000474025 USP6P35125 1406 aa7.49□□□□□ -1.21
SNRNP40-204ENST00000474025 PIK3C2AO00443 1686 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 MYOM1P52179 1685 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 WNK3Q9BYP7 1800 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 C1QTNF8P60827 252 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 SRPK2P78362 688 aaKnown RBP7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 DDB1Q16531 1140 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 PROM2Q8N271 834 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 COL18A1P39060 1754 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 WDR17Q8IZU2 1322 aa7.48□□□□□ -1.21
SNRNP40-204ENST00000474025 CPSF1Q10570 1443 aaKnown RBP7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 ZBTB7AO95365 584 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 PTGER2P43116 358 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 NLRP6P59044 892 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 TOM1L2Q6ZVM7 507 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 MARCH10Q8NA82 808 aaPredicted RBP7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 ZNF784Q8NCA9 323 aaPredicted RBP7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 CABP2Q9NPB3 220 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 AXIN2Q9Y2T1 843 aa7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 CENPJQ9HC77 1338 aaPredicted RBP7.47□□□□□ -1.21
SNRNP40-204ENST00000474025 CABP1Q9NZU7 370 aa7.46□□□□□ -1.22
SNRNP40-204ENST00000474025 FARP1Q9Y4F1 1045 aaPredicted RBP7.46□□□□□ -1.22
SNRNP40-204ENST00000474025 QRICH2Q9H0J4 1663 aa7.46□□□□□ -1.22
SNRNP40-204ENST00000474025 AKAP12Q02952 1782 aa7.46□□□□□ -1.22
SNRNP40-204ENST00000474025 TNS2Q63HR2 1409 aa7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 TXNRD1Q16881 649 aa7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 ARHGEF25Q86VW2 580 aa7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 SGIP1Q9BQI5 828 aa7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 CDCA7Q9BWT1 371 aaPredicted RBP7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 NFAT5O94916 1531 aa7.45□□□□□ -1.22
SNRNP40-204ENST00000474025 SLC15A2Q16348 729 aa7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 SYT17Q9BSW7 474 aa7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 CARD10Q9BWT7 1032 aa7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 FHDC1Q9C0D6 1143 aaPredicted RBP7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 STK32BQ9NY57 414 aa7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 TRPM1Q7Z4N2 1603 aa7.44□□□□□ -1.22
SNRNP40-204ENST00000474025 ABCC6O95255 1503 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 PAPPAQ13219 1627 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 MTFR1LQ9H019 292 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 NHSQ6T4R5 1651 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 TTC21BQ7Z4L5 1316 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 CCDC7Q96M83 1385 aa7.43□□□□□ -1.22
SNRNP40-204ENST00000474025 RGPD5Q99666 1765 aa7.42□□□□□ -1.22
SNRNP40-204ENST00000474025 SOX12O15370 315 aa7.42□□□□□ -1.22
SNRNP40-204ENST00000474025 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
SNRNP40-204ENST00000474025 KCNH5Q8NCM2 988 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms