RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 VRTNQ9H8Y1 702 aa11.37□□□□□ -0.59
SEC22A-204ENST00000473494 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
SEC22A-204ENST00000473494 GGCXP38435 758 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 SH3BP2P78314 561 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 TRIM32Q13049 653 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 NCOA4Q13772 614 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 PLA2G2CQ5R387 149 aa11.36□□□□□ -0.59
SEC22A-204ENST00000473494 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
SEC22A-204ENST00000473494 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
SEC22A-204ENST00000473494 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
SEC22A-204ENST00000473494 AGERQ15109 404 aa11.35□□□□□ -0.59
SEC22A-204ENST00000473494 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
SEC22A-204ENST00000473494 NBPF20Q3BBV1 942 aa11.34□□□□□ -0.59
SEC22A-204ENST00000473494 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
SEC22A-204ENST00000473494 DEPDC4Q8N2C3 294 aa11.34□□□□□ -0.59
SEC22A-204ENST00000473494 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
SEC22A-204ENST00000473494 ESPNB1AK53 854 aa11.33□□□□□ -0.6
SEC22A-204ENST00000473494 WNT7BP56706 349 aa11.33□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L10C9JJH3 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L21D6R901 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 ATP5J2-PTCD1G3V325 749 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
SEC22A-204ENST00000473494 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
SEC22A-204ENST00000473494 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
SEC22A-204ENST00000473494 EML3Q32P44 896 aa11.31□□□□□ -0.6
SEC22A-204ENST00000473494 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
SEC22A-204ENST00000473494 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
SEC22A-204ENST00000473494 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
SEC22A-204ENST00000473494 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
SEC22A-204ENST00000473494 RPIAP49247 311 aa11.3□□□□□ -0.6
SEC22A-204ENST00000473494 SKOR1P84550 965 aa11.3□□□□□ -0.6
SEC22A-204ENST00000473494 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
SEC22A-204ENST00000473494 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
SEC22A-204ENST00000473494 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
SEC22A-204ENST00000473494 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.3□□□□□ -0.6
SEC22A-204ENST00000473494 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
SEC22A-204ENST00000473494 BRD1O95696 1058 aa11.29□□□□□ -0.6
SEC22A-204ENST00000473494 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
SEC22A-204ENST00000473494 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
SEC22A-204ENST00000473494 NOVA2Q9UNW9 492 aaKnown RBP11.29□□□□□ -0.6
SEC22A-204ENST00000473494 PTK7Q13308 1070 aa11.28□□□□□ -0.6
SEC22A-204ENST00000473494 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
SEC22A-204ENST00000473494 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
SEC22A-204ENST00000473494 TMEM164Q5U3C3 297 aa11.27□□□□□ -0.61
SEC22A-204ENST00000473494 KCNA1Q09470 495 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 TRIM50Q86XT4 487 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
SEC22A-204ENST00000473494 CARNS1A5YM72 827 aa11.25□□□□□ -0.61
SEC22A-204ENST00000473494 RASA1P20936 1047 aa11.25□□□□□ -0.61
SEC22A-204ENST00000473494 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
SEC22A-204ENST00000473494 ATP1A2P50993 1020 aa11.24□□□□□ -0.61
SEC22A-204ENST00000473494 CLDN10P78369 228 aa11.24□□□□□ -0.61
SEC22A-204ENST00000473494 OXLD1Q5BKU9 147 aa11.24□□□□□ -0.61
SEC22A-204ENST00000473494 OGFOD1Q8N543 542 aa11.24□□□□□ -0.61
SEC22A-204ENST00000473494 SIX5Q8N196 739 aa11.23□□□□□ -0.61
SEC22A-204ENST00000473494 KCTD15Q96SI1 283 aaPredicted RBP11.23□□□□□ -0.61
SEC22A-204ENST00000473494 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
SEC22A-204ENST00000473494 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
SEC22A-204ENST00000473494 ANKMY2Q8IV38 441 aa11.22□□□□□ -0.61
SEC22A-204ENST00000473494 EHBP1Q8NDI1 1231 aa11.22□□□□□ -0.61
SEC22A-204ENST00000473494 EMID1Q96A84 441 aaPredicted RBP11.22□□□□□ -0.61
SEC22A-204ENST00000473494 PCDHB11Q9Y5F2 797 aa11.22□□□□□ -0.61
SEC22A-204ENST00000473494 GTF2IP78347 998 aa11.21□□□□□ -0.61
SEC22A-204ENST00000473494 LARGE2Q8N3Y3 721 aa11.21□□□□□ -0.61
SEC22A-204ENST00000473494 MPNDQ8N594 471 aa11.21□□□□□ -0.61
SEC22A-204ENST00000473494 CDK15Q96Q40 435 aa11.21□□□□□ -0.61
SEC22A-204ENST00000473494 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
SEC22A-204ENST00000473494 DNAAF2Q9NVR5 837 aaKnown RBP11.21□□□□□ -0.61
SEC22A-204ENST00000473494 DKK1O94907 266 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 FAM69CQ0P6D2 419 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 MMRN1Q13201 1228 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 VASH1Q7L8A9 365 aaPredicted RBP11.2□□□□□ -0.62
SEC22A-204ENST00000473494 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 ZNF594Q96JF6 807 aaPredicted RBP11.2□□□□□ -0.62
SEC22A-204ENST00000473494 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
SEC22A-204ENST00000473494 DPYDQ12882 1025 aa11.19□□□□□ -0.62
SEC22A-204ENST00000473494 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
SEC22A-204ENST00000473494 RC3H1Q5TC82 1133 aaKnown RBP11.19□□□□□ -0.62
SEC22A-204ENST00000473494 FAM200AQ8TCP9 573 aa11.19□□□□□ -0.62
SEC22A-204ENST00000473494 CD2BP2O95400 341 aaKnown RBP11.18□□□□□ -0.62
SEC22A-204ENST00000473494 CLP1Q92989 425 aaKnown RBP11.18□□□□□ -0.62
SEC22A-204ENST00000473494 USP4Q13107 963 aa11.17□□□□□ -0.62
SEC22A-204ENST00000473494 PCDHGA11Q9Y5H2 935 aa11.17□□□□□ -0.62
SEC22A-204ENST00000473494 TLL2Q9Y6L7 1015 aa11.17□□□□□ -0.62
SEC22A-204ENST00000473494 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
SEC22A-204ENST00000473494 FSHRP23945 695 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms