RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 KDM4CQ9H3R0 1056 aa8.8□□□□□ -1
GINS1-202ENST00000473460 EMILIN1Q9Y6C2 1016 aa8.8□□□□□ -1
GINS1-202ENST00000473460 PPFIA3O75145 1194 aa8.79□□□□□ -1
GINS1-202ENST00000473460 NR6A1Q15406 480 aa8.79□□□□□ -1
GINS1-202ENST00000473460 PPP2R2DQ66LE6 453 aa8.79□□□□□ -1
GINS1-202ENST00000473460 FAM117AQ9C073 453 aa8.79□□□□□ -1
GINS1-202ENST00000473460 FKBPLQ9UIM3 349 aa8.79□□□□□ -1
GINS1-202ENST00000473460 UPP2O95045 317 aa8.78□□□□□ -1
GINS1-202ENST00000473460 CBLBQ13191 982 aa8.78□□□□□ -1
GINS1-202ENST00000473460 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
GINS1-202ENST00000473460 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
GINS1-202ENST00000473460 Q6ZVU0 165 aa8.77□□□□□ -1.01
GINS1-202ENST00000473460 ARHGAP9Q9BRR9 750 aa8.77□□□□□ -1.01
GINS1-202ENST00000473460 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
GINS1-202ENST00000473460 EPS8L1Q8TE68 723 aa8.76□□□□□ -1.01
GINS1-202ENST00000473460 KCTD15Q96SI1 283 aaPredicted RBP8.75□□□□□ -1.01
GINS1-202ENST00000473460 ZC3H4Q9UPT8 1303 aaKnown RBP8.75□□□□□ -1.01
GINS1-202ENST00000473460 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
GINS1-202ENST00000473460 SLC10A4Q96EP9 437 aa8.74□□□□□ -1.01
GINS1-202ENST00000473460 DDRGK1Q96HY6 314 aa8.74□□□□□ -1.01
GINS1-202ENST00000473460 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
GINS1-202ENST00000473460 HMX1Q9NP08 348 aaPredicted RBP8.73□□□□□ -1.01
GINS1-202ENST00000473460 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
GINS1-202ENST00000473460 SPINT1O43278 529 aa8.72□□□□□ -1.01
GINS1-202ENST00000473460 AP1G2O75843 785 aa8.72□□□□□ -1.01
GINS1-202ENST00000473460 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
GINS1-202ENST00000473460 CDV3Q9UKY7 258 aaKnown RBP8.72□□□□□ -1.01
GINS1-202ENST00000473460 KRT76Q01546 638 aa8.71□□□□□ -1.02
GINS1-202ENST00000473460 PTSQ03393 145 aa8.71□□□□□ -1.02
GINS1-202ENST00000473460 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.02
GINS1-202ENST00000473460 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
GINS1-202ENST00000473460 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
GINS1-202ENST00000473460 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
GINS1-202ENST00000473460 PTK2Q05397 1052 aa8.7□□□□□ -1.02
GINS1-202ENST00000473460 AGBL1Q96MI9 1066 aa8.7□□□□□ -1.02
GINS1-202ENST00000473460 GPSM3Q9Y4H4 160 aa8.7□□□□□ -1.02
GINS1-202ENST00000473460 USP17L8P0C7I0 530 aa8.69□□□□□ -1.02
GINS1-202ENST00000473460 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
GINS1-202ENST00000473460 TMPRSS4Q9NRS4 437 aa8.68□□□□□ -1.02
GINS1-202ENST00000473460 CTSOP43234 321 aaPredicted RBP8.67□□□□□ -1.02
GINS1-202ENST00000473460 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
GINS1-202ENST00000473460 SLC35F4A4IF30 521 aa8.66□□□□□ -1.02
GINS1-202ENST00000473460 RFC5P40937 340 aa8.66□□□□□ -1.02
GINS1-202ENST00000473460 RELBQ01201 579 aa8.66□□□□□ -1.02
GINS1-202ENST00000473460 CCDC155Q8N6L0 562 aa8.66□□□□□ -1.02
GINS1-202ENST00000473460 NANOS1Q8WY41 292 aaKnown RBP8.66□□□□□ -1.02
GINS1-202ENST00000473460 KDF1Q8NAX2 398 aaPredicted RBP8.65□□□□□ -1.02
GINS1-202ENST00000473460 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
GINS1-202ENST00000473460 INSM2Q96T92 566 aaPredicted RBP8.65□□□□□ -1.02
GINS1-202ENST00000473460 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
GINS1-202ENST00000473460 LILRA1O75019 489 aa8.64□□□□□ -1.03
GINS1-202ENST00000473460 ADD1P35611 737 aaKnown RBP8.64□□□□□ -1.03
GINS1-202ENST00000473460 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
GINS1-202ENST00000473460 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
GINS1-202ENST00000473460 ESPNB1AK53 854 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 ERVH48-1M5A8F1 160 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 GSK3AP49840 483 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 CNTNAP3BQ96NU0 1288 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 CNTNAP3Q9BZ76 1288 aa8.63□□□□□ -1.03
GINS1-202ENST00000473460 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
GINS1-202ENST00000473460 ADH1AP07327 375 aa8.62□□□□□ -1.03
GINS1-202ENST00000473460 RAB15P59190 212 aa8.62□□□□□ -1.03
GINS1-202ENST00000473460 RNFT1Q5M7Z0 435 aa8.62□□□□□ -1.03
GINS1-202ENST00000473460 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
GINS1-202ENST00000473460 COL25A1Q9BXS0 654 aaPredicted RBP8.62□□□□□ -1.03
GINS1-202ENST00000473460 ITGA6P23229 1130 aa8.61□□□□□ -1.03
GINS1-202ENST00000473460 DZIP3Q86Y13 1208 aaKnown RBP8.61□□□□□ -1.03
GINS1-202ENST00000473460 BCANQ96GW7 911 aa8.61□□□□□ -1.03
GINS1-202ENST00000473460 POLMQ9NP87 494 aaPredicted RBP8.61□□□□□ -1.03
GINS1-202ENST00000473460 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
GINS1-202ENST00000473460 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
GINS1-202ENST00000473460 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
GINS1-202ENST00000473460 PTGIRP43119 386 aa8.58□□□□□ -1.04
GINS1-202ENST00000473460 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
GINS1-202ENST00000473460 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
GINS1-202ENST00000473460 ZNF385CQ66K41 422 aaPredicted RBP8.57□□□□□ -1.04
GINS1-202ENST00000473460 SEPT12Q8IYM1 358 aa8.56□□□□□ -1.04
GINS1-202ENST00000473460 CDC14CA4D256 554 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 FBXO45P0C2W1 286 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 SV2AQ7L0J3 742 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 WHAMMQ8TF30 809 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
GINS1-202ENST00000473460 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
GINS1-202ENST00000473460 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
GINS1-202ENST00000473460 ZBBXA8MT70 800 aa8.54□□□□□ -1.04
GINS1-202ENST00000473460 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
GINS1-202ENST00000473460 SLURP2P0DP57 97 aa8.54□□□□□ -1.04
GINS1-202ENST00000473460 LYSMD3Q7Z3D4 306 aa8.53□□□□□ -1.04
GINS1-202ENST00000473460 RNF144AP50876 292 aaPredicted RBP8.52□□□□□ -1.05
GINS1-202ENST00000473460 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
GINS1-202ENST00000473460 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
GINS1-202ENST00000473460 GPR37L1O60883 481 aa8.51□□□□□ -1.05
GINS1-202ENST00000473460 ARHGEF15O94989 841 aa8.51□□□□□ -1.05
GINS1-202ENST00000473460 SVOPQ8N4V2 548 aa8.51□□□□□ -1.05
GINS1-202ENST00000473460 RHOQP17081 205 aa8.5□□□□□ -1.05
GINS1-202ENST00000473460 GAS6Q14393 721 aa8.5□□□□□ -1.05
GINS1-202ENST00000473460 PRICKLE2Q7Z3G6 844 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 959.9 ms