RNA–Protein interactions for RNA: ENST00000472737.1

SYP-206, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-206ENST00000472737 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
SYP-206ENST00000472737 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
SYP-206ENST00000472737 CCDC9Q9Y3X0 531 aaKnown RBP17.32■□□□□ 0.36
SYP-206ENST00000472737 IP6K1Q92551 441 aa17.31■□□□□ 0.36
SYP-206ENST00000472737 CAMTA1Q9Y6Y1 1673 aa17.31■□□□□ 0.36
SYP-206ENST00000472737 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
SYP-206ENST00000472737 SPATA31A5Q5VU36 1347 aa17.3■□□□□ 0.36
SYP-206ENST00000472737 SPATA31A7Q8IWB4 1347 aa17.3■□□□□ 0.36
SYP-206ENST00000472737 SOX12O15370 315 aa17.3■□□□□ 0.36
SYP-206ENST00000472737 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
SYP-206ENST00000472737 AMPHP49418 695 aa17.3■□□□□ 0.36
SYP-206ENST00000472737 CDCA7Q9BWT1 371 aaPredicted RBP17.3■□□□□ 0.36
SYP-206ENST00000472737 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
SYP-206ENST00000472737 WDR17Q8IZU2 1322 aa17.29■□□□□ 0.36
SYP-206ENST00000472737 ZBTB7CA1YPR0 619 aa17.29■□□□□ 0.36
SYP-206ENST00000472737 ONECUT3O60422 494 aaPredicted RBP17.29■□□□□ 0.36
SYP-206ENST00000472737 MORC1Q86VD1 984 aa17.29■□□□□ 0.36
SYP-206ENST00000472737 CRB1P82279 1406 aa17.29■□□□□ 0.36
SYP-206ENST00000472737 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
SYP-206ENST00000472737 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
SYP-206ENST00000472737 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
SYP-206ENST00000472737 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SYP-206ENST00000472737 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
SYP-206ENST00000472737 FLT4P35916 1363 aa17.28■□□□□ 0.36
SYP-206ENST00000472737 SPATA31A1Q5TZJ5 1347 aa17.27■□□□□ 0.36
SYP-206ENST00000472737 CSB-PGBD3P0DP91 1061 aa17.27■□□□□ 0.36
SYP-206ENST00000472737 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
SYP-206ENST00000472737 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
SYP-206ENST00000472737 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
SYP-206ENST00000472737 CARD10Q9BWT7 1032 aa17.26■□□□□ 0.35
SYP-206ENST00000472737 RGPD5Q99666 1765 aa17.25■□□□□ 0.35
SYP-206ENST00000472737 ERBB3P21860 1342 aa17.25■□□□□ 0.35
SYP-206ENST00000472737 HOXC9P31274 260 aa17.25■□□□□ 0.35
SYP-206ENST00000472737 GLI3P10071 1580 aa17.24■□□□□ 0.35
SYP-206ENST00000472737 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
SYP-206ENST00000472737 INSRP06213 1382 aa17.24■□□□□ 0.35
SYP-206ENST00000472737 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
SYP-206ENST00000472737 ANKRD24Q8TF21 1146 aa17.23■□□□□ 0.35
SYP-206ENST00000472737 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
SYP-206ENST00000472737 ILDR2Q71H61 639 aa17.2■□□□□ 0.34
SYP-206ENST00000472737 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
SYP-206ENST00000472737 RGS12O14924 1447 aa17.2■□□□□ 0.34
SYP-206ENST00000472737 ZNF316A6NFI3 1004 aaPredicted RBP17.19■□□□□ 0.34
SYP-206ENST00000472737 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
SYP-206ENST00000472737 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
SYP-206ENST00000472737 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
SYP-206ENST00000472737 A0A0G2JS52 829 aa17.18■□□□□ 0.34
SYP-206ENST00000472737 MYT1Q01538 1121 aa17.18■□□□□ 0.34
SYP-206ENST00000472737 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
SYP-206ENST00000472737 THSD7AQ9UPZ6 1657 aa17.17■□□□□ 0.34
SYP-206ENST00000472737 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
SYP-206ENST00000472737 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
SYP-206ENST00000472737 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
SYP-206ENST00000472737 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
SYP-206ENST00000472737 SOCS7O14512 581 aa17.16■□□□□ 0.34
SYP-206ENST00000472737 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
SYP-206ENST00000472737 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
SYP-206ENST00000472737 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
SYP-206ENST00000472737 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
SYP-206ENST00000472737 IL2RBP14784 551 aa17.15■□□□□ 0.34
SYP-206ENST00000472737 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
SYP-206ENST00000472737 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
SYP-206ENST00000472737 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
SYP-206ENST00000472737 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
SYP-206ENST00000472737 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
SYP-206ENST00000472737 RALBP1Q15311 655 aa17.14■□□□□ 0.33
SYP-206ENST00000472737 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
SYP-206ENST00000472737 EXOC5O00471 708 aa17.13■□□□□ 0.33
SYP-206ENST00000472737 FBLN1P23142 703 aa17.13■□□□□ 0.33
SYP-206ENST00000472737 DDB1Q16531 1140 aa17.13■□□□□ 0.33
SYP-206ENST00000472737 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
SYP-206ENST00000472737 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
SYP-206ENST00000472737 MTHFSP49914 203 aa17.11■□□□□ 0.33
SYP-206ENST00000472737 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
SYP-206ENST00000472737 RAPGEF4Q8WZA2 1011 aa17.11■□□□□ 0.33
SYP-206ENST00000472737 DISP2A7MBM2 1401 aa17.11■□□□□ 0.33
SYP-206ENST00000472737 OVOS2A0A0G2JMS6 1433 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 BCL9O00512 1426 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 PARD3Q8TEW0 1356 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
SYP-206ENST00000472737 EIF4A2Q14240 407 aaKnown RBP17.08■□□□□ 0.32
SYP-206ENST00000472737 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
SYP-206ENST00000472737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.32
SYP-206ENST00000472737 TNS2Q63HR2 1409 aa17.07■□□□□ 0.32
SYP-206ENST00000472737 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
SYP-206ENST00000472737 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
SYP-206ENST00000472737 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
SYP-206ENST00000472737 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
SYP-206ENST00000472737 LRRC37A3O60309 1634 aa17.06■□□□□ 0.32
SYP-206ENST00000472737 IGSF1Q8N6C5 1336 aa17.05■□□□□ 0.32
SYP-206ENST00000472737 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
SYP-206ENST00000472737 EYA1Q99502 592 aa17.05■□□□□ 0.32
SYP-206ENST00000472737 IL13P35225 146 aa17.04■□□□□ 0.32
SYP-206ENST00000472737 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
SYP-206ENST00000472737 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
SYP-206ENST00000472737 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
SYP-206ENST00000472737 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
SYP-206ENST00000472737 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms