RNA–Protein interactions for RNA: ENST00000472419.1

VEPH1-207, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-207ENST00000472419 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
VEPH1-207ENST00000472419 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
VEPH1-207ENST00000472419 TRMT44Q8IYL2 757 aaKnown RBP9.72□□□□□ -0.85
VEPH1-207ENST00000472419 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
VEPH1-207ENST00000472419 RETREG2Q8NC44 543 aa9.72□□□□□ -0.85
VEPH1-207ENST00000472419 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
VEPH1-207ENST00000472419 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
VEPH1-207ENST00000472419 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
VEPH1-207ENST00000472419 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
VEPH1-207ENST00000472419 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
VEPH1-207ENST00000472419 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
VEPH1-207ENST00000472419 SLC19A1P41440 591 aa9.7□□□□□ -0.86
VEPH1-207ENST00000472419 VRTNQ9H8Y1 702 aa9.7□□□□□ -0.86
VEPH1-207ENST00000472419 RAB15P59190 212 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 NCOA4Q13772 614 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 NBPF20Q3BBV1 942 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 KANK4Q5T7N3 995 aaPredicted RBP9.69□□□□□ -0.86
VEPH1-207ENST00000472419 TRAF7Q6Q0C0 670 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 PLEKHM2Q8IWE5 1019 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 CHIC2Q9UKJ5 165 aa9.69□□□□□ -0.86
VEPH1-207ENST00000472419 ESPNB1AK53 854 aa9.68□□□□□ -0.86
VEPH1-207ENST00000472419 PDIA4P13667 645 aaKnown RBP9.68□□□□□ -0.86
VEPH1-207ENST00000472419 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
VEPH1-207ENST00000472419 VASH1Q7L8A9 365 aaPredicted RBP9.68□□□□□ -0.86
VEPH1-207ENST00000472419 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
VEPH1-207ENST00000472419 CDV3Q9UKY7 258 aaKnown RBP9.68□□□□□ -0.86
VEPH1-207ENST00000472419 A0A0G2JS52 829 aa9.67□□□□□ -0.86
VEPH1-207ENST00000472419 CDCA7Q9BWT1 371 aaPredicted RBP9.67□□□□□ -0.86
VEPH1-207ENST00000472419 MKRN1Q9UHC7 482 aaKnown RBP9.67□□□□□ -0.86
VEPH1-207ENST00000472419 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
VEPH1-207ENST00000472419 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
VEPH1-207ENST00000472419 EML3Q32P44 896 aa9.66□□□□□ -0.86
VEPH1-207ENST00000472419 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
VEPH1-207ENST00000472419 OXLD1Q5BKU9 147 aa9.66□□□□□ -0.86
VEPH1-207ENST00000472419 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
VEPH1-207ENST00000472419 ATG7O95352 703 aa9.65□□□□□ -0.86
VEPH1-207ENST00000472419 SPRYD7Q5W111 196 aa9.65□□□□□ -0.86
VEPH1-207ENST00000472419 MAP4K5Q9Y4K4 846 aa9.65□□□□□ -0.86
VEPH1-207ENST00000472419 PCDHB11Q9Y5F2 797 aa9.65□□□□□ -0.86
VEPH1-207ENST00000472419 CARNS1A5YM72 827 aa9.64□□□□□ -0.87
VEPH1-207ENST00000472419 SIAH2O43255 324 aa9.64□□□□□ -0.87
VEPH1-207ENST00000472419 INTS6LQ5JSJ4 861 aaKnown RBP9.64□□□□□ -0.87
VEPH1-207ENST00000472419 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
VEPH1-207ENST00000472419 CSB-PGBD3P0DP91 1061 aa9.63□□□□□ -0.87
VEPH1-207ENST00000472419 ZNF697Q5TEC3 545 aa9.63□□□□□ -0.87
VEPH1-207ENST00000472419 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
VEPH1-207ENST00000472419 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
VEPH1-207ENST00000472419 WNT7AO00755 349 aa9.62□□□□□ -0.87
VEPH1-207ENST00000472419 LZTS3O60299 673 aaPredicted RBP9.62□□□□□ -0.87
VEPH1-207ENST00000472419 RASA1P20936 1047 aa9.62□□□□□ -0.87
VEPH1-207ENST00000472419 FSHRP23945 695 aa9.62□□□□□ -0.87
VEPH1-207ENST00000472419 CRTC2Q53ET0 693 aaPredicted RBP9.62□□□□□ -0.87
VEPH1-207ENST00000472419 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L21D6R901 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 ERVH48-1M5A8F1 160 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 FOXC1Q12948 553 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
VEPH1-207ENST00000472419 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
VEPH1-207ENST00000472419 GRM5P41594 1212 aa9.6□□□□□ -0.87
VEPH1-207ENST00000472419 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
VEPH1-207ENST00000472419 TRAIPQ9BWF2 469 aa9.6□□□□□ -0.87
VEPH1-207ENST00000472419 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
VEPH1-207ENST00000472419 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
VEPH1-207ENST00000472419 FAM196BA6NMK8 535 aa9.59□□□□□ -0.87
VEPH1-207ENST00000472419 CLDN10P78369 228 aa9.59□□□□□ -0.87
VEPH1-207ENST00000472419 OGFOD1Q8N543 542 aa9.59□□□□□ -0.87
VEPH1-207ENST00000472419 MPNDQ8N594 471 aa9.59□□□□□ -0.87
VEPH1-207ENST00000472419 NOVA2Q9UNW9 492 aaKnown RBP9.59□□□□□ -0.87
VEPH1-207ENST00000472419 ADH1CP00326 375 aa9.58□□□□□ -0.88
VEPH1-207ENST00000472419 GTF2IP78347 998 aa9.58□□□□□ -0.88
VEPH1-207ENST00000472419 PTK7Q13308 1070 aa9.58□□□□□ -0.88
VEPH1-207ENST00000472419 STK32AQ8WU08 396 aa9.58□□□□□ -0.88
VEPH1-207ENST00000472419 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
VEPH1-207ENST00000472419 DNAAF2Q9NVR5 837 aaKnown RBP9.58□□□□□ -0.88
VEPH1-207ENST00000472419 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
VEPH1-207ENST00000472419 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 SCTRP47872 440 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 USP4Q13107 963 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 ELOAQ14241 798 aaKnown RBP9.57□□□□□ -0.88
VEPH1-207ENST00000472419 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
VEPH1-207ENST00000472419 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
VEPH1-207ENST00000472419 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
VEPH1-207ENST00000472419 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
VEPH1-207ENST00000472419 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
VEPH1-207ENST00000472419 TMEM164Q5U3C3 297 aa9.56□□□□□ -0.88
VEPH1-207ENST00000472419 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms