RNA–Protein interactions for RNA: ENST00000472419.1

VEPH1-207, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 3

Gene VEPH1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-207ENST00000472419 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
VEPH1-207ENST00000472419 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
VEPH1-207ENST00000472419 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
VEPH1-207ENST00000472419 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
VEPH1-207ENST00000472419 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
VEPH1-207ENST00000472419 FOXD1Q16676 465 aa18.92■□□□□ 0.62
VEPH1-207ENST00000472419 ADRA2BP18089 450 aa18.53■□□□□ 0.56
VEPH1-207ENST00000472419 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
VEPH1-207ENST00000472419 PIAS4Q8N2W9 510 aaPredicted RBP17.92■□□□□ 0.46
VEPH1-207ENST00000472419 KCNA4P22459 653 aa17.39■□□□□ 0.37
VEPH1-207ENST00000472419 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
VEPH1-207ENST00000472419 MSH5O43196 834 aa17.22■□□□□ 0.35
VEPH1-207ENST00000472419 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
VEPH1-207ENST00000472419 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
VEPH1-207ENST00000472419 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
VEPH1-207ENST00000472419 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
VEPH1-207ENST00000472419 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
VEPH1-207ENST00000472419 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
VEPH1-207ENST00000472419 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
VEPH1-207ENST00000472419 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
VEPH1-207ENST00000472419 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
VEPH1-207ENST00000472419 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
VEPH1-207ENST00000472419 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
VEPH1-207ENST00000472419 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
VEPH1-207ENST00000472419 ZBTB22O15209 634 aa16.01■□□□□ 0.15
VEPH1-207ENST00000472419 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
VEPH1-207ENST00000472419 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
VEPH1-207ENST00000472419 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
VEPH1-207ENST00000472419 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
VEPH1-207ENST00000472419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.06
VEPH1-207ENST00000472419 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
VEPH1-207ENST00000472419 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
VEPH1-207ENST00000472419 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
VEPH1-207ENST00000472419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
VEPH1-207ENST00000472419 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
VEPH1-207ENST00000472419 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
VEPH1-207ENST00000472419 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
VEPH1-207ENST00000472419 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
VEPH1-207ENST00000472419 APLP2Q06481 763 aa14.81□□□□□ -0.04
VEPH1-207ENST00000472419 ZNF219Q9P2Y4 722 aaPredicted RBP14.73□□□□□ -0.05
VEPH1-207ENST00000472419 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
VEPH1-207ENST00000472419 FKBP8Q14318 412 aa14.66□□□□□ -0.06
VEPH1-207ENST00000472419 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
VEPH1-207ENST00000472419 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
VEPH1-207ENST00000472419 CAPN15O75808 1086 aa14.61□□□□□ -0.07
VEPH1-207ENST00000472419 POLA2Q14181 598 aa14.47□□□□□ -0.09
VEPH1-207ENST00000472419 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
VEPH1-207ENST00000472419 ABCB7O75027 752 aa14.4□□□□□ -0.1
VEPH1-207ENST00000472419 FBLN2P98095 1184 aa14.33□□□□□ -0.12
VEPH1-207ENST00000472419 DSG3P32926 999 aa14.26□□□□□ -0.13
VEPH1-207ENST00000472419 SPDYE4A6NLX3 237 aa14.24□□□□□ -0.13
VEPH1-207ENST00000472419 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
VEPH1-207ENST00000472419 ZBTB12Q9Y330 459 aaPredicted RBP14.18□□□□□ -0.14
VEPH1-207ENST00000472419 PROM2Q8N271 834 aa14.03□□□□□ -0.16
VEPH1-207ENST00000472419 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
VEPH1-207ENST00000472419 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
VEPH1-207ENST00000472419 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
VEPH1-207ENST00000472419 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
VEPH1-207ENST00000472419 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
VEPH1-207ENST00000472419 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
VEPH1-207ENST00000472419 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
VEPH1-207ENST00000472419 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
VEPH1-207ENST00000472419 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
VEPH1-207ENST00000472419 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
VEPH1-207ENST00000472419 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEPH1-207ENST00000472419 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
VEPH1-207ENST00000472419 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
VEPH1-207ENST00000472419 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
VEPH1-207ENST00000472419 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
VEPH1-207ENST00000472419 PLCD3Q8N3E9 789 aa13.49□□□□□ -0.25
VEPH1-207ENST00000472419 MIER1Q8N108 512 aa13.47□□□□□ -0.25
VEPH1-207ENST00000472419 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
VEPH1-207ENST00000472419 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
VEPH1-207ENST00000472419 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
VEPH1-207ENST00000472419 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
VEPH1-207ENST00000472419 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
VEPH1-207ENST00000472419 PKD2Q13563 968 aa13.34□□□□□ -0.27
VEPH1-207ENST00000472419 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
VEPH1-207ENST00000472419 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
VEPH1-207ENST00000472419 SLC24A1O60721 1099 aa13.25□□□□□ -0.29
VEPH1-207ENST00000472419 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
VEPH1-207ENST00000472419 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
VEPH1-207ENST00000472419 PITPNM1O00562 1244 aa13.21□□□□□ -0.29
VEPH1-207ENST00000472419 ECM2O94769 699 aaPredicted RBP13.19□□□□□ -0.3
VEPH1-207ENST00000472419 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
VEPH1-207ENST00000472419 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
VEPH1-207ENST00000472419 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
VEPH1-207ENST00000472419 NUBP1P53384 320 aa13.09□□□□□ -0.31
VEPH1-207ENST00000472419 RGL2O15211 777 aa13.07□□□□□ -0.32
VEPH1-207ENST00000472419 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
VEPH1-207ENST00000472419 GSE1Q14687 1217 aa13.01□□□□□ -0.33
VEPH1-207ENST00000472419 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
VEPH1-207ENST00000472419 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
VEPH1-207ENST00000472419 TRIM41Q8WV44 630 aa12.96□□□□□ -0.33
VEPH1-207ENST00000472419 NPM1P06748 294 aaKnown RBP eCLIP12.95□□□□□ -0.34
VEPH1-207ENST00000472419 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
VEPH1-207ENST00000472419 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
VEPH1-207ENST00000472419 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
VEPH1-207ENST00000472419 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
VEPH1-207ENST00000472419 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms