RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 COG3Q96JB2 828 aa17.12■□□□□ 0.33
SCNM1-205ENST00000471039 GGNBP2Q9H3C7 697 aa17.12■□□□□ 0.33
SCNM1-205ENST00000471039 PANK3Q9H999 370 aa17.12■□□□□ 0.33
SCNM1-205ENST00000471039 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
SCNM1-205ENST00000471039 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
SCNM1-205ENST00000471039 NSD2O96028 1365 aa17.11■□□□□ 0.33
SCNM1-205ENST00000471039 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
SCNM1-205ENST00000471039 RXRBP28702 533 aa17.1■□□□□ 0.33
SCNM1-205ENST00000471039 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
SCNM1-205ENST00000471039 VPS72Q15906 364 aa17.1■□□□□ 0.33
SCNM1-205ENST00000471039 LRRC37A3O60309 1634 aa17.1■□□□□ 0.33
SCNM1-205ENST00000471039 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
SCNM1-205ENST00000471039 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
SCNM1-205ENST00000471039 GJD4Q96KN9 370 aaPredicted RBP17.08■□□□□ 0.32
SCNM1-205ENST00000471039 CRB1P82279 1406 aa17.07■□□□□ 0.32
SCNM1-205ENST00000471039 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
SCNM1-205ENST00000471039 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
SCNM1-205ENST00000471039 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
SCNM1-205ENST00000471039 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
SCNM1-205ENST00000471039 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
SCNM1-205ENST00000471039 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
SCNM1-205ENST00000471039 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
SCNM1-205ENST00000471039 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
SCNM1-205ENST00000471039 EP400Q96L91 3159 aa17.03■□□□□ 0.32
SCNM1-205ENST00000471039 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
SCNM1-205ENST00000471039 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
SCNM1-205ENST00000471039 ERBB3P21860 1342 aa17.02■□□□□ 0.32
SCNM1-205ENST00000471039 FBLN1P23142 703 aa17.02■□□□□ 0.32
SCNM1-205ENST00000471039 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
SCNM1-205ENST00000471039 FLT4P35916 1363 aa17.02■□□□□ 0.31
SCNM1-205ENST00000471039 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
SCNM1-205ENST00000471039 SHANK3Q9BYB0 1731 aa17.01■□□□□ 0.31
SCNM1-205ENST00000471039 EVA1CP58658 441 aa17.01■□□□□ 0.31
SCNM1-205ENST00000471039 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
SCNM1-205ENST00000471039 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
SCNM1-205ENST00000471039 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
SCNM1-205ENST00000471039 HOXC9P31274 260 aa17■□□□□ 0.31
SCNM1-205ENST00000471039 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
SCNM1-205ENST00000471039 IP6K1Q92551 441 aa16.99■□□□□ 0.31
SCNM1-205ENST00000471039 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
SCNM1-205ENST00000471039 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
SCNM1-205ENST00000471039 RGPD1P0DJD0 1748 aa16.98■□□□□ 0.31
SCNM1-205ENST00000471039 TNS1Q9HBL0 1735 aaKnown RBP16.97■□□□□ 0.31
SCNM1-205ENST00000471039 AMPHP49418 695 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 TOM1L2Q6ZVM7 507 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 INSRP06213 1382 aa16.97■□□□□ 0.31
SCNM1-205ENST00000471039 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
SCNM1-205ENST00000471039 ONECUT3O60422 494 aaPredicted RBP16.96■□□□□ 0.31
SCNM1-205ENST00000471039 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
SCNM1-205ENST00000471039 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
SCNM1-205ENST00000471039 TCP11L2Q8N4U5 519 aa16.96■□□□□ 0.31
SCNM1-205ENST00000471039 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.3
SCNM1-205ENST00000471039 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
SCNM1-205ENST00000471039 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
SCNM1-205ENST00000471039 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
SCNM1-205ENST00000471039 A0A0G2JS52 829 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 SOCS7O14512 581 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 MYT1Q01538 1121 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 MORC1Q86VD1 984 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
SCNM1-205ENST00000471039 NCAPD2Q15021 1401 aa16.93■□□□□ 0.3
SCNM1-205ENST00000471039 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
SCNM1-205ENST00000471039 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
SCNM1-205ENST00000471039 POLKQ9UBT6 870 aa16.92■□□□□ 0.3
SCNM1-205ENST00000471039 MEGF6O75095 1541 aa16.91■□□□□ 0.3
SCNM1-205ENST00000471039 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
SCNM1-205ENST00000471039 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
SCNM1-205ENST00000471039 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
SCNM1-205ENST00000471039 COL3A1P02461 1466 aaPredicted RBP16.9■□□□□ 0.3
SCNM1-205ENST00000471039 KRT27Q7Z3Y8 459 aa16.89■□□□□ 0.29
SCNM1-205ENST00000471039 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.29
SCNM1-205ENST00000471039 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
SCNM1-205ENST00000471039 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
SCNM1-205ENST00000471039 CNGB1Q14028 1251 aaPredicted RBP16.86■□□□□ 0.29
SCNM1-205ENST00000471039 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
SCNM1-205ENST00000471039 RGPD3A6NKT7 1758 aaPredicted RBP16.85■□□□□ 0.29
SCNM1-205ENST00000471039 RGPD4Q7Z3J3 1758 aa16.85■□□□□ 0.29
SCNM1-205ENST00000471039 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
SCNM1-205ENST00000471039 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
SCNM1-205ENST00000471039 IL2RBP14784 551 aa16.84■□□□□ 0.29
SCNM1-205ENST00000471039 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
SCNM1-205ENST00000471039 EIF4A2Q14240 407 aaKnown RBP16.84■□□□□ 0.29
SCNM1-205ENST00000471039 NBPF6Q5VWK0 638 aa16.84■□□□□ 0.29
SCNM1-205ENST00000471039 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
SCNM1-205ENST00000471039 NBPF4Q96M43 638 aa16.84■□□□□ 0.29
SCNM1-205ENST00000471039 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
SCNM1-205ENST00000471039 DDB1Q16531 1140 aa16.83■□□□□ 0.28
SCNM1-205ENST00000471039 UPF1Q92900 1129 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCNM1-205ENST00000471039 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
SCNM1-205ENST00000471039 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
SCNM1-205ENST00000471039 RREB1Q92766 1687 aa16.81■□□□□ 0.28
SCNM1-205ENST00000471039 MTHFSP49914 203 aa16.81■□□□□ 0.28
SCNM1-205ENST00000471039 BTAF1O14981 1849 aa16.81■□□□□ 0.28
SCNM1-205ENST00000471039 BCL9O00512 1426 aa16.8■□□□□ 0.28
SCNM1-205ENST00000471039 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
SCNM1-205ENST00000471039 PDE3BQ13370 1112 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms