RNA–Protein interactions for RNA: ENST00000471001.1

NIPSNAP3A-202, Transcript of nipsnap homolog 3A, humanhuman

TSL 2

Gene NIPSNAP3A, Length 1,148 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-202ENST00000471001 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 NR6A1Q15406 480 aa12.18□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 TSEN34Q9BSV6 310 aaKnown RBP12.18□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 FKBPLQ9UIM3 349 aa12.18□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.17□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 SKIV2LQ15477 1246 aaKnown RBP12.16□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 SH3D19Q5HYK7 790 aa12.16□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 Q6ZVU0 165 aa12.16□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 FAM117AQ9C073 453 aa12.16□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 KRT76Q01546 638 aa12.15□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 GPR161Q8N6U8 529 aaKnown RBP12.15□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 KCTD15Q96SI1 283 aaPredicted RBP12.15□□□□□ -0.46
NIPSNAP3A-202ENST00000471001 TTLL8A6PVC2 850 aa12.14□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 SLC24A1O60721 1099 aa12.14□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 PPP2R2DQ66LE6 453 aa12.13□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 EPS8L1Q8TE68 723 aa12.13□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 SPINT1O43278 529 aa12.12□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 PTSQ03393 145 aa12.12□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 SLC10A4Q96EP9 437 aa12.12□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 AGBL1Q96MI9 1066 aa12.11□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.1□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
NIPSNAP3A-202ENST00000471001 AP1G2O75843 785 aa12.08□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 ADAM32Q8TC27 787 aa12.08□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 CTSOP43234 321 aaPredicted RBP12.06□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 DDRGK1Q96HY6 314 aa12.05□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 USP17L8P0C7I0 530 aa12.04□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 GSK3AP49840 483 aa12.04□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 RELBQ01201 579 aa12.04□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 PTK2Q05397 1052 aa12.04□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 SLC35F4A4IF30 521 aa12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 CNTNAP3BQ96NU0 1288 aa12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 CNTNAP3Q9BZ76 1288 aa12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 GPSM3Q9Y4H4 160 aa12.03□□□□□ -0.48
NIPSNAP3A-202ENST00000471001 KDF1Q8NAX2 398 aaPredicted RBP12.02□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 NANOS1Q8WY41 292 aaKnown RBP12.01□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 LILRA1O75019 489 aa12□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 COL25A1Q9BXS0 654 aaPredicted RBP12□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ZNF395Q9H8N7 513 aaPredicted RBP12□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 RAB15P59190 212 aa11.99□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 RNF217Q8TC41 542 aa11.99□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ERVH48-1M5A8F1 160 aa11.98□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 RFC5P40937 340 aa11.98□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ESPNB1AK53 854 aa11.97□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ITGA6P23229 1130 aa11.97□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 FOXD4L5Q5VV16 416 aaPredicted RBP11.97□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 ADH1AP07327 375 aa11.96□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 POLMQ9NP87 494 aaPredicted RBP11.96□□□□□ -0.49
NIPSNAP3A-202ENST00000471001 KCNMA1Q12791 1236 aa11.95□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 VWA5B2Q8N398 1253 aa11.95□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 ZNF385CQ66K41 422 aaPredicted RBP11.94□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 WHAMMQ8TF30 809 aa11.94□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 CDC14CA4D256 554 aa11.91□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 PTGIRP43119 386 aa11.91□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 CUEDC1Q9NWM3 386 aaPredicted RBP11.91□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 CYLDQ9NQC7 956 aa11.9□□□□□ -0.5
NIPSNAP3A-202ENST00000471001 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 SV2AQ7L0J3 742 aa11.88□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 KCTD17Q8N5Z5 321 aa11.88□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 RASSF7Q02833 373 aa11.85□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 GAS6Q14393 721 aa11.85□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
NIPSNAP3A-202ENST00000471001 LOC100996750A0A140TA64 210 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 RHOQP17081 205 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 LYSMD3Q7Z3D4 306 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 KRTAP4-6Q9BYQ5 205 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 ZBBXA8MT70 800 aa11.81□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 RNF144AP50876 292 aaPredicted RBP11.81□□□□□ -0.52
NIPSNAP3A-202ENST00000471001 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms