RNA–Protein interactions for RNA: ENST00000471001.1

NIPSNAP3A-202, Transcript of nipsnap homolog 3A, humanhuman

TSL 2

Gene NIPSNAP3A, Length 1,148 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-202ENST00000471001 AEBP2Q6ZN18 517 aaPredicted RBP36.08■■■■□ 3.37
NIPSNAP3A-202ENST00000471001 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.07
NIPSNAP3A-202ENST00000471001 SENP3Q9H4L4 574 aaPredicted RBP30.59■■■□□ 2.49
NIPSNAP3A-202ENST00000471001 PHF23Q9BUL5 403 aaPredicted RBP30.27■■■□□ 2.44
NIPSNAP3A-202ENST00000471001 FOXD1Q16676 465 aa28.62■■■□□ 2.17
NIPSNAP3A-202ENST00000471001 PLPPR3Q6T4P5 718 aa27.27■■□□□ 1.96
NIPSNAP3A-202ENST00000471001 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
NIPSNAP3A-202ENST00000471001 ADRA2BP18089 450 aa26.73■■□□□ 1.87
NIPSNAP3A-202ENST00000471001 PIAS4Q8N2W9 510 aaPredicted RBP26.68■■□□□ 1.86
NIPSNAP3A-202ENST00000471001 MSH5O43196 834 aa26.63■■□□□ 1.85
NIPSNAP3A-202ENST00000471001 POTEDQ86YR6 584 aa26.05■■□□□ 1.76
NIPSNAP3A-202ENST00000471001 MAPK8IP2Q13387 824 aaPredicted RBP24.57■■□□□ 1.52
NIPSNAP3A-202ENST00000471001 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
NIPSNAP3A-202ENST00000471001 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
NIPSNAP3A-202ENST00000471001 PPP4R3CPQ6ZMV5 832 aa23.96■■□□□ 1.43
NIPSNAP3A-202ENST00000471001 CNKSR2Q8WXI2 1034 aa23.45■■□□□ 1.34
NIPSNAP3A-202ENST00000471001 HOXD11P31277 338 aaPredicted RBP23.44■■□□□ 1.34
NIPSNAP3A-202ENST00000471001 DCAF8L1A6NGE4 600 aa23.26■■□□□ 1.31
NIPSNAP3A-202ENST00000471001 RNF216Q9NWF9 866 aaPredicted RBP23.24■■□□□ 1.31
NIPSNAP3A-202ENST00000471001 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
NIPSNAP3A-202ENST00000471001 CACNB1Q02641 598 aaPredicted RBP22.85■■□□□ 1.25
NIPSNAP3A-202ENST00000471001 RNF39Q9H2S5 420 aa22.82■■□□□ 1.24
NIPSNAP3A-202ENST00000471001 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
NIPSNAP3A-202ENST00000471001 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
NIPSNAP3A-202ENST00000471001 C1QBPQ07021 282 aaKnown RBP22.41■■□□□ 1.18
NIPSNAP3A-202ENST00000471001 KCNA4P22459 653 aa22.39■■□□□ 1.17
NIPSNAP3A-202ENST00000471001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.16
NIPSNAP3A-202ENST00000471001 U3KPZ7 1027 aaPredicted RBP21.92■■□□□ 1.1
NIPSNAP3A-202ENST00000471001 SLC4A2P04920 1241 aa21.77■■□□□ 1.08
NIPSNAP3A-202ENST00000471001 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
NIPSNAP3A-202ENST00000471001 CAPN15O75808 1086 aa21.45■■□□□ 1.02
NIPSNAP3A-202ENST00000471001 DSG3P32926 999 aa21.39■■□□□ 1.01
NIPSNAP3A-202ENST00000471001 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
NIPSNAP3A-202ENST00000471001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
NIPSNAP3A-202ENST00000471001 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
NIPSNAP3A-202ENST00000471001 APLP2Q06481 763 aa21.07■□□□□ 0.96
NIPSNAP3A-202ENST00000471001 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
NIPSNAP3A-202ENST00000471001 SAMD1Q6SPF0 538 aaPredicted RBP21.05■□□□□ 0.96
NIPSNAP3A-202ENST00000471001 ABCB7O75027 752 aa21.04■□□□□ 0.96
NIPSNAP3A-202ENST00000471001 ZNF219Q9P2Y4 722 aaPredicted RBP21.04■□□□□ 0.96
NIPSNAP3A-202ENST00000471001 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
NIPSNAP3A-202ENST00000471001 FOXD4L1Q9NU39 408 aa20.79■□□□□ 0.92
NIPSNAP3A-202ENST00000471001 ZBTB22O15209 634 aa20.66■□□□□ 0.9
NIPSNAP3A-202ENST00000471001 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.89
NIPSNAP3A-202ENST00000471001 POLA2Q14181 598 aa20.6■□□□□ 0.89
NIPSNAP3A-202ENST00000471001 POTEHQ6S545 545 aa20.38■□□□□ 0.85
NIPSNAP3A-202ENST00000471001 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
NIPSNAP3A-202ENST00000471001 ATXN8OSP0DMR3 200 aa20.1■□□□□ 0.81
NIPSNAP3A-202ENST00000471001 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
NIPSNAP3A-202ENST00000471001 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
NIPSNAP3A-202ENST00000471001 CHRDL2Q6WN34 429 aa19.91■□□□□ 0.78
NIPSNAP3A-202ENST00000471001 AKT1S1Q96B36 256 aa19.87■□□□□ 0.77
NIPSNAP3A-202ENST00000471001 REM2Q8IYK8 340 aaPredicted RBP19.74■□□□□ 0.75
NIPSNAP3A-202ENST00000471001 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
NIPSNAP3A-202ENST00000471001 MKRN4PQ13434 485 aaPredicted RBP19.67■□□□□ 0.74
NIPSNAP3A-202ENST00000471001 FBLN2P98095 1184 aa19.61■□□□□ 0.73
NIPSNAP3A-202ENST00000471001 PITPNM1O00562 1244 aa19.56■□□□□ 0.72
NIPSNAP3A-202ENST00000471001 SPDYE2BA6NHP3 402 aa19.51■□□□□ 0.71
NIPSNAP3A-202ENST00000471001 SPDYE6P0CI01 402 aa19.51■□□□□ 0.71
NIPSNAP3A-202ENST00000471001 SPDYE2Q495Y8 402 aa19.51■□□□□ 0.71
NIPSNAP3A-202ENST00000471001 PIP4P2Q8N4L2 257 aa19.48■□□□□ 0.71
NIPSNAP3A-202ENST00000471001 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
NIPSNAP3A-202ENST00000471001 FXR2P51116 673 aaKnown RBP eCLIP19.36■□□□□ 0.69
NIPSNAP3A-202ENST00000471001 SSUH2Q9Y2M2 353 aa19.34■□□□□ 0.69
NIPSNAP3A-202ENST00000471001 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
NIPSNAP3A-202ENST00000471001 SPDYE1Q8NFV5 336 aaPredicted RBP19.15■□□□□ 0.66
NIPSNAP3A-202ENST00000471001 CLEC11AQ9Y240 323 aa19.13■□□□□ 0.65
NIPSNAP3A-202ENST00000471001 SP7Q8TDD2 431 aaPredicted RBP19.11■□□□□ 0.65
NIPSNAP3A-202ENST00000471001 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
NIPSNAP3A-202ENST00000471001 HAX1O00165 279 aa19.04■□□□□ 0.64
NIPSNAP3A-202ENST00000471001 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
NIPSNAP3A-202ENST00000471001 EVX2Q03828 476 aa18.97■□□□□ 0.63
NIPSNAP3A-202ENST00000471001 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
NIPSNAP3A-202ENST00000471001 PRR29P0C7W0 189 aa18.8■□□□□ 0.6
NIPSNAP3A-202ENST00000471001 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
NIPSNAP3A-202ENST00000471001 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
NIPSNAP3A-202ENST00000471001 FARP1Q9Y4F1 1045 aaPredicted RBP18.53■□□□□ 0.56
NIPSNAP3A-202ENST00000471001 CREBZFQ9NS37 354 aa18.46■□□□□ 0.55
NIPSNAP3A-202ENST00000471001 GABBR2O75899 941 aa18.45■□□□□ 0.54
NIPSNAP3A-202ENST00000471001 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
NIPSNAP3A-202ENST00000471001 CD44P16070 742 aaKnown RBP18.4■□□□□ 0.54
NIPSNAP3A-202ENST00000471001 PROM2Q8N271 834 aa18.28■□□□□ 0.52
NIPSNAP3A-202ENST00000471001 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
NIPSNAP3A-202ENST00000471001 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
NIPSNAP3A-202ENST00000471001 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
NIPSNAP3A-202ENST00000471001 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
NIPSNAP3A-202ENST00000471001 CLCN6P51797 869 aa17.99■□□□□ 0.47
NIPSNAP3A-202ENST00000471001 PHF12Q96QT6 1004 aa17.97■□□□□ 0.47
NIPSNAP3A-202ENST00000471001 GALR2O43603 387 aaPredicted RBP17.96■□□□□ 0.47
NIPSNAP3A-202ENST00000471001 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
NIPSNAP3A-202ENST00000471001 LHX8Q68G74 356 aa17.92■□□□□ 0.46
NIPSNAP3A-202ENST00000471001 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
NIPSNAP3A-202ENST00000471001 DCBLD2Q96PD2 775 aa17.87■□□□□ 0.45
NIPSNAP3A-202ENST00000471001 FKBP8Q14318 412 aa17.79■□□□□ 0.44
NIPSNAP3A-202ENST00000471001 MIER1Q8N108 512 aa17.74■□□□□ 0.43
NIPSNAP3A-202ENST00000471001 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
NIPSNAP3A-202ENST00000471001 MS4A3Q96HJ5 214 aa17.72■□□□□ 0.43
NIPSNAP3A-202ENST00000471001 CCDC61Q9Y6R9 512 aa17.7■□□□□ 0.42
NIPSNAP3A-202ENST00000471001 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
NIPSNAP3A-202ENST00000471001 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 379.2 ms