RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 PDXDC2PQ6P474 469 aa7.78□□□□□ -1.16
HERC3-208ENST00000470815 Q6ZVU0 165 aa7.78□□□□□ -1.16
HERC3-208ENST00000470815 CARD14Q9BXL6 1004 aa7.78□□□□□ -1.16
HERC3-208ENST00000470815 PGPEP1Q9NXJ5 209 aa7.78□□□□□ -1.16
HERC3-208ENST00000470815 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
HERC3-208ENST00000470815 BRPF1P55201 1214 aaPredicted RBP7.77□□□□□ -1.17
HERC3-208ENST00000470815 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
HERC3-208ENST00000470815 SPINT1O43278 529 aa7.76□□□□□ -1.17
HERC3-208ENST00000470815 KCNMA1Q12791 1236 aa7.76□□□□□ -1.17
HERC3-208ENST00000470815 NANOS1Q8WY41 292 aaKnown RBP7.76□□□□□ -1.17
HERC3-208ENST00000470815 PTSQ03393 145 aa7.75□□□□□ -1.17
HERC3-208ENST00000470815 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
HERC3-208ENST00000470815 SLC10A4Q96EP9 437 aa7.75□□□□□ -1.17
HERC3-208ENST00000470815 ARHGAP9Q9BRR9 750 aa7.75□□□□□ -1.17
HERC3-208ENST00000470815 FKBPLQ9UIM3 349 aa7.75□□□□□ -1.17
HERC3-208ENST00000470815 CTDSPL2Q05D32 466 aa7.74□□□□□ -1.17
HERC3-208ENST00000470815 KCTD15Q96SI1 283 aaPredicted RBP7.74□□□□□ -1.17
HERC3-208ENST00000470815 KDM4CQ9H3R0 1056 aa7.74□□□□□ -1.17
HERC3-208ENST00000470815 KRT76Q01546 638 aa7.73□□□□□ -1.17
HERC3-208ENST00000470815 GPBP1L1Q9HC44 474 aaPredicted RBP7.73□□□□□ -1.17
HERC3-208ENST00000470815 POLR3EQ9NVU0 708 aa7.73□□□□□ -1.17
HERC3-208ENST00000470815 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
HERC3-208ENST00000470815 GSK3AP49840 483 aa7.72□□□□□ -1.17
HERC3-208ENST00000470815 CBLBQ13191 982 aa7.72□□□□□ -1.17
HERC3-208ENST00000470815 NEUROD2Q15784 382 aa7.72□□□□□ -1.17
HERC3-208ENST00000470815 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
HERC3-208ENST00000470815 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
HERC3-208ENST00000470815 CCDC155Q8N6L0 562 aa7.71□□□□□ -1.18
HERC3-208ENST00000470815 LRRN4Q8WUT4 740 aa7.71□□□□□ -1.18
HERC3-208ENST00000470815 SLC35F4A4IF30 521 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 FIGNL2A6NMB9 653 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
HERC3-208ENST00000470815 SKIV2LQ15477 1246 aaKnown RBP7.7□□□□□ -1.18
HERC3-208ENST00000470815 SH3D19Q5HYK7 790 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 INTS6LQ5JSJ4 861 aaKnown RBP7.7□□□□□ -1.18
HERC3-208ENST00000470815 PPP2R2DQ66LE6 453 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
HERC3-208ENST00000470815 LOC100996750A0A140TA64 210 aa7.69□□□□□ -1.18
HERC3-208ENST00000470815 PTK2Q05397 1052 aa7.69□□□□□ -1.18
HERC3-208ENST00000470815 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
HERC3-208ENST00000470815 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
HERC3-208ENST00000470815 KRTAP4-6Q9BYQ5 205 aa7.69□□□□□ -1.18
HERC3-208ENST00000470815 ITGA6P23229 1130 aa7.68□□□□□ -1.18
HERC3-208ENST00000470815 NR6A1Q15406 480 aa7.68□□□□□ -1.18
HERC3-208ENST00000470815 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
HERC3-208ENST00000470815 OCSTAMPQ9BR26 566 aa7.68□□□□□ -1.18
HERC3-208ENST00000470815 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
HERC3-208ENST00000470815 PNMA1Q8ND90 353 aa7.67□□□□□ -1.18
HERC3-208ENST00000470815 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
HERC3-208ENST00000470815 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
HERC3-208ENST00000470815 CTSOP43234 321 aaPredicted RBP7.66□□□□□ -1.18
HERC3-208ENST00000470815 TMEM151AQ8N4L1 468 aa7.66□□□□□ -1.18
HERC3-208ENST00000470815 ADAM32Q8TC27 787 aa7.66□□□□□ -1.18
HERC3-208ENST00000470815 RNF217Q8TC41 542 aa7.66□□□□□ -1.18
HERC3-208ENST00000470815 INSM2Q96T92 566 aaPredicted RBP7.66□□□□□ -1.18
HERC3-208ENST00000470815 RELBQ01201 579 aa7.65□□□□□ -1.18
HERC3-208ENST00000470815 RASSF7Q02833 373 aa7.65□□□□□ -1.18
HERC3-208ENST00000470815 RNFT1Q5M7Z0 435 aa7.65□□□□□ -1.18
HERC3-208ENST00000470815 FBXO31Q5XUX0 539 aaPredicted RBP7.65□□□□□ -1.18
HERC3-208ENST00000470815 ZNF385CQ66K41 422 aaPredicted RBP7.65□□□□□ -1.18
HERC3-208ENST00000470815 SV2AQ7L0J3 742 aa7.65□□□□□ -1.18
HERC3-208ENST00000470815 AGBL1Q96MI9 1066 aa7.65□□□□□ -1.18
HERC3-208ENST00000470815 GDF11O95390 407 aa7.64□□□□□ -1.19
HERC3-208ENST00000470815 ADH1AP07327 375 aa7.64□□□□□ -1.19
HERC3-208ENST00000470815 SVOPQ8N4V2 548 aa7.64□□□□□ -1.19
HERC3-208ENST00000470815 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
HERC3-208ENST00000470815 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
HERC3-208ENST00000470815 POLMQ9NP87 494 aaPredicted RBP7.64□□□□□ -1.19
HERC3-208ENST00000470815 SENP3-EIF4A1A0A087X0R7 540 aa7.63□□□□□ -1.19
HERC3-208ENST00000470815 VWA5B2Q8N398 1253 aa7.63□□□□□ -1.19
HERC3-208ENST00000470815 ZNF784Q8NCA9 323 aaPredicted RBP7.63□□□□□ -1.19
HERC3-208ENST00000470815 PROCA1Q8NCQ7 364 aaPredicted RBP7.63□□□□□ -1.19
HERC3-208ENST00000470815 CDC14CA4D256 554 aa7.62□□□□□ -1.19
HERC3-208ENST00000470815 ESPNB1AK53 854 aa7.62□□□□□ -1.19
HERC3-208ENST00000470815 SUZ12Q15022 739 aaKnown RBP7.62□□□□□ -1.19
HERC3-208ENST00000470815 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
HERC3-208ENST00000470815 LILRA1O75019 489 aa7.61□□□□□ -1.19
HERC3-208ENST00000470815 AP1G2O75843 785 aa7.61□□□□□ -1.19
HERC3-208ENST00000470815 ARHGEF15O94989 841 aa7.61□□□□□ -1.19
HERC3-208ENST00000470815 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
HERC3-208ENST00000470815 SEPT12Q8IYM1 358 aa7.61□□□□□ -1.19
HERC3-208ENST00000470815 ZNF395Q9H8N7 513 aaPredicted RBP7.61□□□□□ -1.19
HERC3-208ENST00000470815 TMPRSS4Q9NRS4 437 aa7.61□□□□□ -1.19
HERC3-208ENST00000470815 ERVH48-1M5A8F1 160 aa7.6□□□□□ -1.19
HERC3-208ENST00000470815 USP17L8P0C7I0 530 aa7.6□□□□□ -1.19
HERC3-208ENST00000470815 PTGIRP43119 386 aa7.6□□□□□ -1.19
HERC3-208ENST00000470815 DZIP3Q86Y13 1208 aaKnown RBP7.6□□□□□ -1.19
HERC3-208ENST00000470815 KDF1Q8NAX2 398 aaPredicted RBP7.6□□□□□ -1.19
HERC3-208ENST00000470815 EPS8L1Q8TE68 723 aa7.59□□□□□ -1.19
HERC3-208ENST00000470815 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
HERC3-208ENST00000470815 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
HERC3-208ENST00000470815 ADD1P35611 737 aaKnown RBP7.58□□□□□ -1.2
HERC3-208ENST00000470815 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
HERC3-208ENST00000470815 KANK3Q6NY19 840 aa7.58□□□□□ -1.2
HERC3-208ENST00000470815 LYSMD3Q7Z3D4 306 aa7.58□□□□□ -1.2
HERC3-208ENST00000470815 IL27Q8NEV9 243 aa7.58□□□□□ -1.2
HERC3-208ENST00000470815 DNMT3AQ9Y6K1 912 aaPredicted RBP7.58□□□□□ -1.2
HERC3-208ENST00000470815 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms