RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
PSMD4-210ENST00000470396 SPATA31A5Q5VU36 1347 aa9.48□□□□□ -0.89
PSMD4-210ENST00000470396 SPATA31A7Q8IWB4 1347 aa9.48□□□□□ -0.89
PSMD4-210ENST00000470396 THSD7AQ9UPZ6 1657 aa9.48□□□□□ -0.89
PSMD4-210ENST00000470396 CCDC7Q96M83 1385 aa9.48□□□□□ -0.89
PSMD4-210ENST00000470396 ABCC6O95255 1503 aa9.47□□□□□ -0.89
PSMD4-210ENST00000470396 ONECUT3O60422 494 aaPredicted RBP9.47□□□□□ -0.89
PSMD4-210ENST00000470396 KCNH5Q8NCM2 988 aa9.47□□□□□ -0.89
PSMD4-210ENST00000470396 PANK3Q9H999 370 aa9.47□□□□□ -0.89
PSMD4-210ENST00000470396 SPATA31A1Q5TZJ5 1347 aa9.47□□□□□ -0.89
PSMD4-210ENST00000470396 PEAK1Q9H792 1746 aa9.47□□□□□ -0.89
PSMD4-210ENST00000470396 ZBTB7CA1YPR0 619 aa9.46□□□□□ -0.9
PSMD4-210ENST00000470396 COG3Q96JB2 828 aa9.46□□□□□ -0.9
PSMD4-210ENST00000470396 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
PSMD4-210ENST00000470396 MAP3K19Q56UN5 1328 aa9.46□□□□□ -0.9
PSMD4-210ENST00000470396 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
PSMD4-210ENST00000470396 FAM98CQ17RN3 349 aaKnown RBP9.45□□□□□ -0.9
PSMD4-210ENST00000470396 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
PSMD4-210ENST00000470396 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
PSMD4-210ENST00000470396 SEPT12Q8IYM1 358 aa9.44□□□□□ -0.9
PSMD4-210ENST00000470396 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
PSMD4-210ENST00000470396 CGNL1Q0VF96 1302 aa9.44□□□□□ -0.9
PSMD4-210ENST00000470396 CRB1P82279 1406 aa9.44□□□□□ -0.9
PSMD4-210ENST00000470396 WNK3Q9BYP7 1800 aa9.43□□□□□ -0.9
PSMD4-210ENST00000470396 ERBB3P21860 1342 aa9.43□□□□□ -0.9
PSMD4-210ENST00000470396 WDR17Q8IZU2 1322 aa9.43□□□□□ -0.9
PSMD4-210ENST00000470396 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
PSMD4-210ENST00000470396 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
PSMD4-210ENST00000470396 BLMP54132 1417 aaPredicted RBP9.42□□□□□ -0.9
PSMD4-210ENST00000470396 HOXC9P31274 260 aa9.42□□□□□ -0.9
PSMD4-210ENST00000470396 EVA1CP58658 441 aa9.42□□□□□ -0.9
PSMD4-210ENST00000470396 IP6K1Q92551 441 aa9.42□□□□□ -0.9
PSMD4-210ENST00000470396 USP35Q9P2H5 1018 aa9.42□□□□□ -0.9
PSMD4-210ENST00000470396 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
PSMD4-210ENST00000470396 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
PSMD4-210ENST00000470396 DISP2A7MBM2 1401 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 RTL1A6NKG5 1358 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 TCP11L2Q8N4U5 519 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
PSMD4-210ENST00000470396 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
PSMD4-210ENST00000470396 NSD2O96028 1365 aa9.4□□□□□ -0.9
PSMD4-210ENST00000470396 TOM1L2Q6ZVM7 507 aa9.4□□□□□ -0.9
PSMD4-210ENST00000470396 ANKRD24Q8TF21 1146 aa9.4□□□□□ -0.9
PSMD4-210ENST00000470396 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
PSMD4-210ENST00000470396 POLKQ9UBT6 870 aa9.4□□□□□ -0.9
PSMD4-210ENST00000470396 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
PSMD4-210ENST00000470396 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
PSMD4-210ENST00000470396 FAM182BQ5T319 152 aa9.39□□□□□ -0.91
PSMD4-210ENST00000470396 KNSTRNQ9Y448 316 aa9.39□□□□□ -0.91
PSMD4-210ENST00000470396 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
PSMD4-210ENST00000470396 INSRP06213 1382 aa9.38□□□□□ -0.91
PSMD4-210ENST00000470396 FLT4P35916 1363 aa9.38□□□□□ -0.91
PSMD4-210ENST00000470396 AMPHP49418 695 aa9.38□□□□□ -0.91
PSMD4-210ENST00000470396 KRT27Q7Z3Y8 459 aa9.38□□□□□ -0.91
PSMD4-210ENST00000470396 LTV1Q96GA3 475 aaPredicted RBP9.38□□□□□ -0.91
PSMD4-210ENST00000470396 THRAP3Q9Y2W1 955 aaKnown RBP9.38□□□□□ -0.91
PSMD4-210ENST00000470396 KIF24Q5T7B8 1368 aa9.37□□□□□ -0.91
PSMD4-210ENST00000470396 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
PSMD4-210ENST00000470396 NLRP2Q9NX02 1062 aa9.37□□□□□ -0.91
PSMD4-210ENST00000470396 NPC1L1Q9UHC9 1359 aa9.37□□□□□ -0.91
PSMD4-210ENST00000470396 A0A0G2JS52 829 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 MYT1Q01538 1121 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 NBPF6Q5VWK0 638 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 MORC1Q86VD1 984 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 NBPF4Q96M43 638 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 NCAPD2Q15021 1401 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 MEGF6O75095 1541 aa9.36□□□□□ -0.91
PSMD4-210ENST00000470396 ZEB1P37275 1124 aaPredicted RBP9.35□□□□□ -0.91
PSMD4-210ENST00000470396 CC2D1BQ5T0F9 858 aaKnown RBP9.35□□□□□ -0.91
PSMD4-210ENST00000470396 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
PSMD4-210ENST00000470396 USHBP1Q8N6Y0 703 aa9.35□□□□□ -0.91
PSMD4-210ENST00000470396 TNS1Q9HBL0 1735 aaKnown RBP9.35□□□□□ -0.91
PSMD4-210ENST00000470396 SBF2Q86WG5 1849 aa9.34□□□□□ -0.91
PSMD4-210ENST00000470396 PPM1GO15355 546 aaPredicted RBP9.34□□□□□ -0.91
PSMD4-210ENST00000470396 MARCH10Q8NA82 808 aaPredicted RBP9.34□□□□□ -0.91
PSMD4-210ENST00000470396 RGPD1P0DJD0 1748 aa9.34□□□□□ -0.92
PSMD4-210ENST00000470396 IL2RBP14784 551 aa9.33□□□□□ -0.92
PSMD4-210ENST00000470396 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
PSMD4-210ENST00000470396 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
PSMD4-210ENST00000470396 OVOS2A0A0G2JMS6 1433 aa9.32□□□□□ -0.92
PSMD4-210ENST00000470396 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
PSMD4-210ENST00000470396 DDB1Q16531 1140 aa9.32□□□□□ -0.92
PSMD4-210ENST00000470396 PTF1AQ7RTS3 328 aa9.32□□□□□ -0.92
PSMD4-210ENST00000470396 EYA1Q99502 592 aa9.32□□□□□ -0.92
PSMD4-210ENST00000470396 CDCA7Q9BWT1 371 aaPredicted RBP9.32□□□□□ -0.92
PSMD4-210ENST00000470396 BCL9O00512 1426 aa9.31□□□□□ -0.92
PSMD4-210ENST00000470396 MTHFSP49914 203 aa9.31□□□□□ -0.92
PSMD4-210ENST00000470396 PDE3BQ13370 1112 aa9.31□□□□□ -0.92
PSMD4-210ENST00000470396 PKD1L3Q7Z443 1732 aa9.31□□□□□ -0.92
PSMD4-210ENST00000470396 IGSF1Q8N6C5 1336 aa9.31□□□□□ -0.92
PSMD4-210ENST00000470396 IL13P35225 146 aa9.3□□□□□ -0.92
PSMD4-210ENST00000470396 DDX10Q13206 875 aaKnown RBP9.3□□□□□ -0.92
PSMD4-210ENST00000470396 FAM196AQ6ZSG2 479 aa9.3□□□□□ -0.92
PSMD4-210ENST00000470396 DEFB132Q7Z7B7 95 aa9.3□□□□□ -0.92
PSMD4-210ENST00000470396 CCDC125Q86Z20 511 aa9.3□□□□□ -0.92
PSMD4-210ENST00000470396 PARD3Q8TEW0 1356 aa9.29□□□□□ -0.92
PSMD4-210ENST00000470396 EXOC5O00471 708 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms