RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 PPP1R1BQ9UD71 204 aaPredicted RBP25.86■■□□□ 1.73
COPS6-206ENST00000468499 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
COPS6-206ENST00000468499 BRD4O60885 1362 aaPredicted RBP25.84■■□□□ 1.73
COPS6-206ENST00000468499 BCL9O00512 1426 aa25.84■■□□□ 1.73
COPS6-206ENST00000468499 SRPK2P78362 688 aaKnown RBP25.84■■□□□ 1.73
COPS6-206ENST00000468499 ZBTB7CA1YPR0 619 aa25.83■■□□□ 1.73
COPS6-206ENST00000468499 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
COPS6-206ENST00000468499 CPSF1Q10570 1443 aaKnown RBP25.82■■□□□ 1.72
COPS6-206ENST00000468499 PTGER2P43116 358 aa25.82■■□□□ 1.72
COPS6-206ENST00000468499 DDB1Q16531 1140 aa25.82■■□□□ 1.72
COPS6-206ENST00000468499 BCL11BQ9C0K0 894 aaPredicted RBP25.82■■□□□ 1.72
COPS6-206ENST00000468499 CABP1Q9NZU7 370 aa25.81■■□□□ 1.72
COPS6-206ENST00000468499 C11orf95C9JLR9 678 aaPredicted RBP25.8■■□□□ 1.72
COPS6-206ENST00000468499 NLRP6P59044 892 aa25.8■■□□□ 1.72
COPS6-206ENST00000468499 WDR17Q8IZU2 1322 aa25.8■■□□□ 1.72
COPS6-206ENST00000468499 NFAT5O94916 1531 aa25.78■■□□□ 1.72
COPS6-206ENST00000468499 ZBTB7AO95365 584 aa25.78■■□□□ 1.72
COPS6-206ENST00000468499 TOM1L2Q6ZVM7 507 aa25.78■■□□□ 1.72
COPS6-206ENST00000468499 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
COPS6-206ENST00000468499 PAPPAQ13219 1627 aa25.77■■□□□ 1.72
COPS6-206ENST00000468499 NHSQ6T4R5 1651 aa25.76■■□□□ 1.71
COPS6-206ENST00000468499 ARHGEF25Q86VW2 580 aa25.75■■□□□ 1.71
COPS6-206ENST00000468499 TXNRD1Q16881 649 aa25.72■■□□□ 1.71
COPS6-206ENST00000468499 SGIP1Q9BQI5 828 aa25.72■■□□□ 1.71
COPS6-206ENST00000468499 ATF5Q9Y2D1 282 aaPredicted RBP25.71■■□□□ 1.71
COPS6-206ENST00000468499 TTC21BQ7Z4L5 1316 aa25.7■■□□□ 1.71
COPS6-206ENST00000468499 CARD10Q9BWT7 1032 aa25.7■■□□□ 1.7
COPS6-206ENST00000468499 TNS2Q63HR2 1409 aa25.7■■□□□ 1.7
COPS6-206ENST00000468499 MON2Q7Z3U7 1717 aa25.69■■□□□ 1.7
COPS6-206ENST00000468499 USP54Q70EL1 1684 aa25.68■■□□□ 1.7
COPS6-206ENST00000468499 SLC15A2Q16348 729 aa25.68■■□□□ 1.7
COPS6-206ENST00000468499 ZNF784Q8NCA9 323 aaPredicted RBP25.68■■□□□ 1.7
COPS6-206ENST00000468499 ABCC6O95255 1503 aa25.68■■□□□ 1.7
COPS6-206ENST00000468499 CDCA7Q9BWT1 371 aaPredicted RBP25.67■■□□□ 1.7
COPS6-206ENST00000468499 FHDC1Q9C0D6 1143 aaPredicted RBP25.67■■□□□ 1.7
COPS6-206ENST00000468499 CHD4Q14839 1912 aa25.67■■□□□ 1.7
COPS6-206ENST00000468499 BTAF1O14981 1849 aa25.66■■□□□ 1.7
COPS6-206ENST00000468499 SOX12O15370 315 aa25.66■■□□□ 1.7
COPS6-206ENST00000468499 SYT17Q9BSW7 474 aa25.66■■□□□ 1.7
COPS6-206ENST00000468499 DCAF8L1A6NGE4 600 aa25.64■■□□□ 1.7
COPS6-206ENST00000468499 STK32BQ9NY57 414 aa25.63■■□□□ 1.69
COPS6-206ENST00000468499 LTN1O94822 1766 aa25.63■■□□□ 1.69
COPS6-206ENST00000468499 GOLGB1Q14789 3259 aaKnown RBP25.62■■□□□ 1.69
COPS6-206ENST00000468499 CCDC7Q96M83 1385 aa25.61■■□□□ 1.69
COPS6-206ENST00000468499 MTFR1LQ9H019 292 aa25.61■■□□□ 1.69
COPS6-206ENST00000468499 EVC2Q86UK5 1308 aa25.61■■□□□ 1.69
COPS6-206ENST00000468499 COL24A1Q17RW2 1714 aa25.6■■□□□ 1.69
COPS6-206ENST00000468499 EXOC5O00471 708 aa25.6■■□□□ 1.69
COPS6-206ENST00000468499 CSB-PGBD3P0DP91 1061 aa25.6■■□□□ 1.69
COPS6-206ENST00000468499 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
COPS6-206ENST00000468499 CD163L1Q9NR16 1453 aa25.6■■□□□ 1.69
COPS6-206ENST00000468499 L3MBTL2Q969R5 705 aa25.59■■□□□ 1.69
COPS6-206ENST00000468499 TTC21AQ8NDW8 1320 aa25.59■■□□□ 1.69
COPS6-206ENST00000468499 ZNF827Q17R98 1081 aa25.58■■□□□ 1.69
COPS6-206ENST00000468499 ACSBG1Q96GR2 724 aa25.58■■□□□ 1.69
COPS6-206ENST00000468499 TUBGCP6Q96RT7 1819 aa25.58■■□□□ 1.68
COPS6-206ENST00000468499 QSER1Q2KHR3 1735 aa25.57■■□□□ 1.68
COPS6-206ENST00000468499 ZNF692Q9BU19 519 aaPredicted RBP25.56■■□□□ 1.68
COPS6-206ENST00000468499 ERBB3P21860 1342 aa25.56■■□□□ 1.68
COPS6-206ENST00000468499 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
COPS6-206ENST00000468499 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
COPS6-206ENST00000468499 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
COPS6-206ENST00000468499 LRRC4BQ9NT99 713 aa25.54■■□□□ 1.68
COPS6-206ENST00000468499 SBNO2Q9Y2G9 1366 aa25.52■■□□□ 1.68
COPS6-206ENST00000468499 ARXQ96QS3 562 aa25.51■■□□□ 1.67
COPS6-206ENST00000468499 NME9Q86XW9 330 aa25.49■■□□□ 1.67
COPS6-206ENST00000468499 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
COPS6-206ENST00000468499 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
COPS6-206ENST00000468499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.47■■□□□ 1.67
COPS6-206ENST00000468499 AKT1S1Q96B36 256 aa25.47■■□□□ 1.67
COPS6-206ENST00000468499 SIN3AQ96ST3 1273 aa25.47■■□□□ 1.67
COPS6-206ENST00000468499 IL2RBP14784 551 aa25.46■■□□□ 1.67
COPS6-206ENST00000468499 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
COPS6-206ENST00000468499 KAT6BQ8WYB5 2073 aa25.45■■□□□ 1.66
COPS6-206ENST00000468499 C1QTNF8P60827 252 aa25.45■■□□□ 1.66
COPS6-206ENST00000468499 LY75O60449 1722 aa25.45■■□□□ 1.66
COPS6-206ENST00000468499 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.66
COPS6-206ENST00000468499 FAM208AQ9UK61 1670 aaKnown RBP25.45■■□□□ 1.66
COPS6-206ENST00000468499 ANKRD24Q8TF21 1146 aa25.44■■□□□ 1.66
COPS6-206ENST00000468499 SENP3-EIF4A1A0A087X0R7 540 aa25.43■■□□□ 1.66
COPS6-206ENST00000468499 PNPLA7Q6ZV29 1317 aa25.42■■□□□ 1.66
COPS6-206ENST00000468499 RGPD2P0DJD1 1756 aa25.42■■□□□ 1.66
COPS6-206ENST00000468499 NSD2O96028 1365 aa25.41■■□□□ 1.66
COPS6-206ENST00000468499 KCNQ4P56696 695 aa25.39■■□□□ 1.66
COPS6-206ENST00000468499 CEP350Q5VT06 3117 aa25.38■■□□□ 1.65
COPS6-206ENST00000468499 NLGN2Q8NFZ4 835 aa25.37■■□□□ 1.65
COPS6-206ENST00000468499 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
COPS6-206ENST00000468499 A0A1W2PP64 1363 aa25.36■■□□□ 1.65
COPS6-206ENST00000468499 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
COPS6-206ENST00000468499 GPR162Q16538 588 aa25.33■■□□□ 1.65
COPS6-206ENST00000468499 SLC27A3Q5K4L6 730 aa25.33■■□□□ 1.65
COPS6-206ENST00000468499 SLC16A10Q8TF71 515 aa25.32■■□□□ 1.64
COPS6-206ENST00000468499 MEGF6O75095 1541 aa25.32■■□□□ 1.64
COPS6-206ENST00000468499 ANKRD36BQ8N2N9 1353 aa25.31■■□□□ 1.64
COPS6-206ENST00000468499 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
COPS6-206ENST00000468499 KLHL34Q8N239 644 aa25.3■■□□□ 1.64
COPS6-206ENST00000468499 IP6K1Q92551 441 aa25.3■■□□□ 1.64
COPS6-206ENST00000468499 YBX3P16989 372 aaKnown RBP eCLIP25.29■■□□□ 1.643e-7■■□□□ 11.9
COPS6-206ENST00000468499 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
COPS6-206ENST00000468499 FBLN1P23142 703 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms