RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 POTECB2RU33 542 aa5.59□□□□□ -1.51
CDHR3-206ENST00000468477 UPP2O95045 317 aa5.59□□□□□ -1.51
CDHR3-206ENST00000468477 FOXJ1Q92949 421 aa5.59□□□□□ -1.51
CDHR3-206ENST00000468477 DACH1Q9UI36 760 aa5.59□□□□□ -1.51
CDHR3-206ENST00000468477 ZC3H4Q9UPT8 1303 aaKnown RBP5.58□□□□□ -1.52
CDHR3-206ENST00000468477 AP1G2O75843 785 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 CTDSPL2Q05D32 466 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 VASH1Q7L8A9 365 aaPredicted RBP5.58□□□□□ -1.52
CDHR3-206ENST00000468477 ZBTB33Q86T24 672 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 DHX37Q8IY37 1157 aaKnown RBP5.58□□□□□ -1.52
CDHR3-206ENST00000468477 TRIM52Q96A61 297 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 TRIM47Q96LD4 638 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 CDK15Q96Q40 435 aa5.58□□□□□ -1.52
CDHR3-206ENST00000468477 CDV3Q9UKY7 258 aaKnown RBP5.58□□□□□ -1.52
CDHR3-206ENST00000468477 A6NJR5 290 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 WDR4P57081 412 aaKnown RBP5.57□□□□□ -1.52
CDHR3-206ENST00000468477 PPP2R2DQ66LE6 453 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 SLC16A10Q8TF71 515 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 CLUAP1Q96AJ1 413 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.57□□□□□ -1.52
CDHR3-206ENST00000468477 CARD14Q9BXL6 1004 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 GOPCQ9HD26 462 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 FKBPLQ9UIM3 349 aa5.57□□□□□ -1.52
CDHR3-206ENST00000468477 PTK2Q05397 1052 aa5.56□□□□□ -1.52
CDHR3-206ENST00000468477 PDXDC2PQ6P474 469 aa5.56□□□□□ -1.52
CDHR3-206ENST00000468477 PROCA1Q8NCQ7 364 aaPredicted RBP5.56□□□□□ -1.52
CDHR3-206ENST00000468477 SLC10A4Q96EP9 437 aa5.56□□□□□ -1.52
CDHR3-206ENST00000468477 ARHGAP9Q9BRR9 750 aa5.56□□□□□ -1.52
CDHR3-206ENST00000468477 TMEM259Q4ZIN3 620 aa5.55□□□□□ -1.52
CDHR3-206ENST00000468477 TREML4Q6UXN2 200 aa5.55□□□□□ -1.52
CDHR3-206ENST00000468477 FAM9AQ8IZU1 332 aaPredicted RBP5.55□□□□□ -1.52
CDHR3-206ENST00000468477 FAM177A1Q8N128 213 aaPredicted RBP5.55□□□□□ -1.52
CDHR3-206ENST00000468477 GPSM3Q9Y4H4 160 aa5.55□□□□□ -1.52
CDHR3-206ENST00000468477 MAP4K5Q9Y4K4 846 aa5.55□□□□□ -1.52
CDHR3-206ENST00000468477 WFS1O76024 890 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 ZIC2O95409 532 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-206ENST00000468477 BMP1P13497 986 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 FSHRP23945 695 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 DHX9Q08211 1270 aaKnown RBP5.54□□□□□ -1.52
CDHR3-206ENST00000468477 NR6A1Q15406 480 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 MRPL14Q6P1L8 145 aaKnown RBP5.54□□□□□ -1.52
CDHR3-206ENST00000468477 SH3BP5LQ7L8J4 393 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 SH3RF1Q7Z6J0 888 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 TRMT44Q8IYL2 757 aaKnown RBP5.54□□□□□ -1.52
CDHR3-206ENST00000468477 LRRN4Q8WUT4 740 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 UBE2Q2Q8WVN8 375 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 PGPEP1Q9NXJ5 209 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 ZNF777Q9ULD5 760 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-206ENST00000468477 EMILIN1Q9Y6C2 1016 aa5.54□□□□□ -1.52
CDHR3-206ENST00000468477 SNRPBP14678 240 aaKnown RBP5.53□□□□□ -1.52
CDHR3-206ENST00000468477 TIMP2P16035 220 aa5.53□□□□□ -1.52
CDHR3-206ENST00000468477 RFC5P40937 340 aa5.53□□□□□ -1.52
CDHR3-206ENST00000468477 NBPF20Q3BBV1 942 aa5.53□□□□□ -1.52
CDHR3-206ENST00000468477 CCDC116Q8IYX3 515 aa5.53□□□□□ -1.52
CDHR3-206ENST00000468477 RETREG2Q8NC44 543 aa5.53□□□□□ -1.52
CDHR3-206ENST00000468477 CCDC97Q96F63 343 aaPredicted RBP5.53□□□□□ -1.52
CDHR3-206ENST00000468477 USP17L8P0C7I0 530 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 IRF5Q13568 498 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 ERFEQ4G0M1 354 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
CDHR3-206ENST00000468477 ZNF592Q92610 1267 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 ZFP42Q96MM3 310 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 PURBQ96QR8 312 aaKnown RBP5.52□□□□□ -1.53
CDHR3-206ENST00000468477 C1QTNF2Q9BXJ5 285 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 SERPINA10Q9UK55 444 aa5.52□□□□□ -1.53
CDHR3-206ENST00000468477 TERTO14746 1132 aaKnown RBP5.51□□□□□ -1.53
CDHR3-206ENST00000468477 BMP2P12643 396 aa5.51□□□□□ -1.53
CDHR3-206ENST00000468477 GRM5P41594 1212 aa5.51□□□□□ -1.53
CDHR3-206ENST00000468477 TRIM46Q7Z4K8 759 aa5.51□□□□□ -1.53
CDHR3-206ENST00000468477 NPAS3Q8IXF0 933 aa5.51□□□□□ -1.53
CDHR3-206ENST00000468477 NXF1Q9UBU9 619 aaKnown RBP5.51□□□□□ -1.53
CDHR3-206ENST00000468477 PPM1GO15355 546 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 MAN1A2O60476 641 aa5.5□□□□□ -1.53
CDHR3-206ENST00000468477 INSM1Q01101 510 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 C6orf118Q5T5N4 469 aa5.5□□□□□ -1.53
CDHR3-206ENST00000468477 DZIP3Q86Y13 1208 aaKnown RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 ITPKCQ96DU7 683 aa5.5□□□□□ -1.53
CDHR3-206ENST00000468477 KCTD15Q96SI1 283 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 TSEN34Q9BSV6 310 aaKnown RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 PRM3Q9NNZ6 103 aa5.5□□□□□ -1.53
CDHR3-206ENST00000468477 ZNF330Q9Y3S2 320 aaPredicted RBP5.5□□□□□ -1.53
CDHR3-206ENST00000468477 NR3C2P08235 984 aa5.49□□□□□ -1.53
CDHR3-206ENST00000468477 LINC00528Q8N1L1 170 aa5.49□□□□□ -1.53
CDHR3-206ENST00000468477 ZFAND3Q9H8U3 227 aa5.49□□□□□ -1.53
CDHR3-206ENST00000468477 ADAM32Q8TC27 787 aa5.48□□□□□ -1.53
CDHR3-206ENST00000468477 IRF7Q92985 503 aa5.48□□□□□ -1.53
CDHR3-206ENST00000468477 KLF16Q9BXK1 252 aaPredicted RBP5.48□□□□□ -1.53
CDHR3-206ENST00000468477 FAM181BA6NEQ2 426 aa5.47□□□□□ -1.53
CDHR3-206ENST00000468477 NFX1Q12986 1120 aaKnown RBP5.47□□□□□ -1.53
CDHR3-206ENST00000468477 PPP1R26Q5T8A7 1209 aaPredicted RBP5.47□□□□□ -1.53
CDHR3-206ENST00000468477 CCDC125Q86Z20 511 aa5.47□□□□□ -1.53
CDHR3-206ENST00000468477 MEIOBQ8N635 442 aa5.47□□□□□ -1.53
CDHR3-206ENST00000468477 MCCD1P59942 119 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-206ENST00000468477 BANK1Q8NDB2 785 aa5.46□□□□□ -1.54
CDHR3-206ENST00000468477 ESF1Q9H501 851 aaKnown RBP5.46□□□□□ -1.54
CDHR3-206ENST00000468477 ZBBXA8MT70 800 aa5.45□□□□□ -1.54
CDHR3-206ENST00000468477 RAB15P59190 212 aa5.45□□□□□ -1.54
CDHR3-206ENST00000468477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.45□□□□□ -1.54
CDHR3-206ENST00000468477 PROSER2Q86WR7 435 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms