RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
CDHR3-206ENST00000468477 CHIC1Q5VXU3 224 aa14.67□□□□□ -0.06
CDHR3-206ENST00000468477 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
CDHR3-206ENST00000468477 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
CDHR3-206ENST00000468477 FOXD1Q16676 465 aa12.06□□□□□ -0.48
CDHR3-206ENST00000468477 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
CDHR3-206ENST00000468477 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
CDHR3-206ENST00000468477 PIAS4Q8N2W9 510 aaPredicted RBP11.4□□□□□ -0.58
CDHR3-206ENST00000468477 ADRA2BP18089 450 aa11.38□□□□□ -0.59
CDHR3-206ENST00000468477 MSH5O43196 834 aa11.36□□□□□ -0.59
CDHR3-206ENST00000468477 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
CDHR3-206ENST00000468477 SCAF1Q9H7N4 1312 aaKnown RBP10.62□□□□□ -0.71
CDHR3-206ENST00000468477 PPP4R3CPQ6ZMV5 832 aa10.4□□□□□ -0.74
CDHR3-206ENST00000468477 MAPK8IP2Q13387 824 aaPredicted RBP10.37□□□□□ -0.75
CDHR3-206ENST00000468477 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
CDHR3-206ENST00000468477 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
CDHR3-206ENST00000468477 NCBP3Q53F19 620 aaKnown RBP10.18□□□□□ -0.78
CDHR3-206ENST00000468477 RNF216Q9NWF9 866 aaPredicted RBP10.06□□□□□ -0.8
CDHR3-206ENST00000468477 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
CDHR3-206ENST00000468477 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
CDHR3-206ENST00000468477 NPM3O75607 178 aaKnown RBP9.88□□□□□ -0.83
CDHR3-206ENST00000468477 KCNA4P22459 653 aa9.83□□□□□ -0.84
CDHR3-206ENST00000468477 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
CDHR3-206ENST00000468477 DNAJC5BQ9UF47 199 aa9.71□□□□□ -0.86
CDHR3-206ENST00000468477 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
CDHR3-206ENST00000468477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDHR3-206ENST00000468477 C1QBPQ07021 282 aaKnown RBP9.56□□□□□ -0.88
CDHR3-206ENST00000468477 SLC4A1APQ9BWU0 796 aaKnown RBP9.4□□□□□ -0.9
CDHR3-206ENST00000468477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-206ENST00000468477 APLP2Q06481 763 aa9.35□□□□□ -0.91
CDHR3-206ENST00000468477 HNRNPUL2Q1KMD3 747 aaKnown RBP9.35□□□□□ -0.91
CDHR3-206ENST00000468477 U3KPZ7 1027 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-206ENST00000468477 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
CDHR3-206ENST00000468477 CAPN15O75808 1086 aa9.25□□□□□ -0.93
CDHR3-206ENST00000468477 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
CDHR3-206ENST00000468477 MYCNP04198 464 aaPredicted RBP9.22□□□□□ -0.93
CDHR3-206ENST00000468477 FOXD4L1Q9NU39 408 aa9.2□□□□□ -0.94
CDHR3-206ENST00000468477 ZNF219Q9P2Y4 722 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-206ENST00000468477 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
CDHR3-206ENST00000468477 TRHP20396 242 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-206ENST00000468477 DSG3P32926 999 aa9.06□□□□□ -0.96
CDHR3-206ENST00000468477 ABCB7O75027 752 aa8.98□□□□□ -0.97
CDHR3-206ENST00000468477 ZBTB22O15209 634 aa8.96□□□□□ -0.98
CDHR3-206ENST00000468477 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
CDHR3-206ENST00000468477 POLA2Q14181 598 aa8.9□□□□□ -0.98
CDHR3-206ENST00000468477 POTEHQ6S545 545 aa8.9□□□□□ -0.98
CDHR3-206ENST00000468477 ZBTB12Q9Y330 459 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-206ENST00000468477 EHMT2Q96KQ7 1210 aa8.84□□□□□ -0.99
CDHR3-206ENST00000468477 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
CDHR3-206ENST00000468477 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
CDHR3-206ENST00000468477 CSRNP3Q8WYN3 585 aa8.77□□□□□ -1.01
CDHR3-206ENST00000468477 FBLN2P98095 1184 aa8.7□□□□□ -1.02
CDHR3-206ENST00000468477 OSCARQ8IYS5 282 aa8.58□□□□□ -1.04
CDHR3-206ENST00000468477 AKT1S1Q96B36 256 aa8.56□□□□□ -1.04
CDHR3-206ENST00000468477 SPDYE2BA6NHP3 402 aa8.52□□□□□ -1.05
CDHR3-206ENST00000468477 SPDYE6P0CI01 402 aa8.52□□□□□ -1.05
CDHR3-206ENST00000468477 SPDYE2Q495Y8 402 aa8.52□□□□□ -1.05
CDHR3-206ENST00000468477 ZNF692Q9BU19 519 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-206ENST00000468477 MKRN4PQ13434 485 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-206ENST00000468477 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
CDHR3-206ENST00000468477 REM2Q8IYK8 340 aaPredicted RBP8.43□□□□□ -1.06
CDHR3-206ENST00000468477 SSUH2Q9Y2M2 353 aa8.35□□□□□ -1.07
CDHR3-206ENST00000468477 SPDYE1Q8NFV5 336 aaPredicted RBP8.34□□□□□ -1.07
CDHR3-206ENST00000468477 PITPNM1O00562 1244 aa8.32□□□□□ -1.08
CDHR3-206ENST00000468477 CLEC11AQ9Y240 323 aa8.32□□□□□ -1.08
CDHR3-206ENST00000468477 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDHR3-206ENST00000468477 SPDYE4A6NLX3 237 aa8.27□□□□□ -1.09
CDHR3-206ENST00000468477 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-206ENST00000468477 PIP4P2Q8N4L2 257 aa8.23□□□□□ -1.09
CDHR3-206ENST00000468477 PRR29P0C7W0 189 aa8.22□□□□□ -1.09
CDHR3-206ENST00000468477 STAG3Q9UJ98 1225 aa8.22□□□□□ -1.09
CDHR3-206ENST00000468477 FXR2P51116 673 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDHR3-206ENST00000468477 SLC24A1O60721 1099 aa8.16□□□□□ -1.1
CDHR3-206ENST00000468477 PRKAR2AP13861 404 aaKnown RBP8.15□□□□□ -1.1
CDHR3-206ENST00000468477 HAX1O00165 279 aa8.11□□□□□ -1.11
CDHR3-206ENST00000468477 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
CDHR3-206ENST00000468477 EVX2Q03828 476 aa8.04□□□□□ -1.12
CDHR3-206ENST00000468477 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
CDHR3-206ENST00000468477 FKBP8Q14318 412 aa8.03□□□□□ -1.12
CDHR3-206ENST00000468477 PROM2Q8N271 834 aa8□□□□□ -1.13
CDHR3-206ENST00000468477 FARP1Q9Y4F1 1045 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-206ENST00000468477 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDHR3-206ENST00000468477 CREBZFQ9NS37 354 aa7.95□□□□□ -1.14
CDHR3-206ENST00000468477 C19orf67A6NJJ6 358 aa7.94□□□□□ -1.14
CDHR3-206ENST00000468477 PAK3O75914 559 aaPredicted RBP7.93□□□□□ -1.14
CDHR3-206ENST00000468477 CD44P16070 742 aaKnown RBP7.92□□□□□ -1.14
CDHR3-206ENST00000468477 FBXO3Q9UK99 471 aa7.92□□□□□ -1.14
CDHR3-206ENST00000468477 MIER1Q8N108 512 aa7.91□□□□□ -1.14
CDHR3-206ENST00000468477 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
CDHR3-206ENST00000468477 ZBTB47Q9UFB7 747 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-206ENST00000468477 CLCN6P51797 869 aa7.88□□□□□ -1.15
CDHR3-206ENST00000468477 ZRANB1Q9UGI0 708 aa7.84□□□□□ -1.15
CDHR3-206ENST00000468477 GABBR2O75899 941 aa7.81□□□□□ -1.16
CDHR3-206ENST00000468477 MNX1P50219 401 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-206ENST00000468477 ZNF579Q8NAF0 562 aaKnown RBP7.77□□□□□ -1.17
CDHR3-206ENST00000468477 TSPYL2Q9H2G4 693 aaPredicted RBP7.74□□□□□ -1.17
CDHR3-206ENST00000468477 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
CDHR3-206ENST00000468477 DCBLD2Q96PD2 775 aa7.73□□□□□ -1.17
CDHR3-206ENST00000468477 LHX8Q68G74 356 aa7.72□□□□□ -1.17
CDHR3-206ENST00000468477 VASPP50552 380 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms