RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 AATKQ6ZMQ8 1374 aa19.8■□□□□ 0.76
RPP40-204ENST00000468105 USP6P35125 1406 aa19.79■□□□□ 0.76
RPP40-204ENST00000468105 BCL11BQ9C0K0 894 aaPredicted RBP19.79■□□□□ 0.76
RPP40-204ENST00000468105 CABP1Q9NZU7 370 aa19.79■□□□□ 0.76
RPP40-204ENST00000468105 RGPD5Q99666 1765 aa19.79■□□□□ 0.76
RPP40-204ENST00000468105 KIAA1210Q9ULL0 1709 aa19.79■□□□□ 0.76
RPP40-204ENST00000468105 SRPK2P78362 688 aaKnown RBP19.78■□□□□ 0.76
RPP40-204ENST00000468105 DDB1Q16531 1140 aa19.78■□□□□ 0.76
RPP40-204ENST00000468105 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
RPP40-204ENST00000468105 NLRP6P59044 892 aa19.77■□□□□ 0.76
RPP40-204ENST00000468105 TOM1L2Q6ZVM7 507 aa19.76■□□□□ 0.75
RPP40-204ENST00000468105 ZNF784Q8NCA9 323 aaPredicted RBP19.75■□□□□ 0.75
RPP40-204ENST00000468105 SGIP1Q9BQI5 828 aa19.75■□□□□ 0.75
RPP40-204ENST00000468105 WDR17Q8IZU2 1322 aa19.75■□□□□ 0.75
RPP40-204ENST00000468105 TXNRD1Q16881 649 aa19.74■□□□□ 0.75
RPP40-204ENST00000468105 BCL9O00512 1426 aa19.74■□□□□ 0.75
RPP40-204ENST00000468105 CENPJQ9HC77 1338 aaPredicted RBP19.74■□□□□ 0.75
RPP40-204ENST00000468105 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
RPP40-204ENST00000468105 AKAP12Q02952 1782 aa19.72■□□□□ 0.75
RPP40-204ENST00000468105 CPSF1Q10570 1443 aaKnown RBP19.72■□□□□ 0.75
RPP40-204ENST00000468105 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
RPP40-204ENST00000468105 FHDC1Q9C0D6 1143 aaPredicted RBP19.72■□□□□ 0.75
RPP40-204ENST00000468105 SYT17Q9BSW7 474 aa19.71■□□□□ 0.75
RPP40-204ENST00000468105 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
RPP40-204ENST00000468105 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
RPP40-204ENST00000468105 C11orf95C9JLR9 678 aaPredicted RBP19.69■□□□□ 0.74
RPP40-204ENST00000468105 SOX12O15370 315 aa19.69■□□□□ 0.74
RPP40-204ENST00000468105 NFAT5O94916 1531 aa19.68■□□□□ 0.74
RPP40-204ENST00000468105 PAPPAQ13219 1627 aa19.67■□□□□ 0.74
RPP40-204ENST00000468105 CARD10Q9BWT7 1032 aa19.67■□□□□ 0.74
RPP40-204ENST00000468105 TTC21BQ7Z4L5 1316 aa19.67■□□□□ 0.74
RPP40-204ENST00000468105 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
RPP40-204ENST00000468105 ACSBG1Q96GR2 724 aa19.65■□□□□ 0.74
RPP40-204ENST00000468105 STK32BQ9NY57 414 aa19.65■□□□□ 0.74
RPP40-204ENST00000468105 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
RPP40-204ENST00000468105 ZNF827Q17R98 1081 aa19.64■□□□□ 0.73
RPP40-204ENST00000468105 TRPM1Q7Z4N2 1603 aa19.64■□□□□ 0.73
RPP40-204ENST00000468105 NHSQ6T4R5 1651 aa19.63■□□□□ 0.73
RPP40-204ENST00000468105 CDCA7Q9BWT1 371 aaPredicted RBP19.62■□□□□ 0.73
RPP40-204ENST00000468105 MTFR1LQ9H019 292 aa19.62■□□□□ 0.73
RPP40-204ENST00000468105 LRRC4BQ9NT99 713 aa19.62■□□□□ 0.73
RPP40-204ENST00000468105 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
RPP40-204ENST00000468105 EXOC5O00471 708 aa19.61■□□□□ 0.73
RPP40-204ENST00000468105 CSB-PGBD3P0DP91 1061 aa19.61■□□□□ 0.73
RPP40-204ENST00000468105 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
RPP40-204ENST00000468105 CHD4Q14839 1912 aa19.6■□□□□ 0.73
RPP40-204ENST00000468105 BTAF1O14981 1849 aa19.59■□□□□ 0.73
RPP40-204ENST00000468105 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
RPP40-204ENST00000468105 ARXQ96QS3 562 aa19.58■□□□□ 0.72
RPP40-204ENST00000468105 C1QTNF8P60827 252 aa19.57■□□□□ 0.72
RPP40-204ENST00000468105 KCNH5Q8NCM2 988 aa19.57■□□□□ 0.72
RPP40-204ENST00000468105 ABCC6O95255 1503 aa19.56■□□□□ 0.72
RPP40-204ENST00000468105 CCDC7Q96M83 1385 aa19.56■□□□□ 0.72
RPP40-204ENST00000468105 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
RPP40-204ENST00000468105 CD163L1Q9NR16 1453 aa19.55■□□□□ 0.72
RPP40-204ENST00000468105 SENP3-EIF4A1A0A087X0R7 540 aa19.55■□□□□ 0.72
RPP40-204ENST00000468105 ERBB3P21860 1342 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 KCNQ4P56696 695 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 NME9Q86XW9 330 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 ZNF692Q9BU19 519 aaPredicted RBP19.54■□□□□ 0.72
RPP40-204ENST00000468105 CEP350Q5VT06 3117 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 MAP3K5Q99683 1374 aa19.54■□□□□ 0.72
RPP40-204ENST00000468105 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
RPP40-204ENST00000468105 KTN1Q86UP2 1357 aaKnown RBP19.53■□□□□ 0.72
RPP40-204ENST00000468105 COL24A1Q17RW2 1714 aa19.53■□□□□ 0.72
RPP40-204ENST00000468105 TUBGCP6Q96RT7 1819 aa19.53■□□□□ 0.72
RPP40-204ENST00000468105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
RPP40-204ENST00000468105 SIN3AQ96ST3 1273 aa19.52■□□□□ 0.72
RPP40-204ENST00000468105 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
RPP40-204ENST00000468105 LTN1O94822 1766 aa19.52■□□□□ 0.71
RPP40-204ENST00000468105 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
RPP40-204ENST00000468105 SBNO2Q9Y2G9 1366 aa19.51■□□□□ 0.71
RPP40-204ENST00000468105 USP54Q70EL1 1684 aa19.51■□□□□ 0.71
RPP40-204ENST00000468105 NLGN2Q8NFZ4 835 aa19.5■□□□□ 0.71
RPP40-204ENST00000468105 PNPLA7Q6ZV29 1317 aa19.5■□□□□ 0.71
RPP40-204ENST00000468105 IL2RBP14784 551 aa19.49■□□□□ 0.71
RPP40-204ENST00000468105 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
RPP40-204ENST00000468105 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
RPP40-204ENST00000468105 ANKRD24Q8TF21 1146 aa19.48■□□□□ 0.71
RPP40-204ENST00000468105 QSER1Q2KHR3 1735 aa19.46■□□□□ 0.71
RPP40-204ENST00000468105 NSD2O96028 1365 aa19.45■□□□□ 0.7
RPP40-204ENST00000468105 GPR162Q16538 588 aa19.45■□□□□ 0.7
RPP40-204ENST00000468105 YBX3P16989 372 aaKnown RBP eCLIP19.44■□□□□ 0.72e-7■□□□□ 9.6
RPP40-204ENST00000468105 FBLN1P23142 703 aa19.44■□□□□ 0.7
RPP40-204ENST00000468105 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
RPP40-204ENST00000468105 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
RPP40-204ENST00000468105 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
RPP40-204ENST00000468105 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
RPP40-204ENST00000468105 PELP1Q8IZL8 1130 aaKnown RBP19.41■□□□□ 0.7
RPP40-204ENST00000468105 FAM208AQ9UK61 1670 aaKnown RBP19.4■□□□□ 0.7
RPP40-204ENST00000468105 LY75O60449 1722 aa19.4■□□□□ 0.7
RPP40-204ENST00000468105 DOT1LQ8TEK3 1739 aa19.4■□□□□ 0.7
RPP40-204ENST00000468105 RGPD2P0DJD1 1756 aa19.4■□□□□ 0.7
RPP40-204ENST00000468105 PRIM1P49642 420 aaKnown RBP19.4■□□□□ 0.7
RPP40-204ENST00000468105 LTV1Q96GA3 475 aaPredicted RBP19.39■□□□□ 0.69
RPP40-204ENST00000468105 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
RPP40-204ENST00000468105 SLC16A10Q8TF71 515 aa19.38■□□□□ 0.69
RPP40-204ENST00000468105 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms