RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-202ENST00000468040 IP6K1Q92551 441 aa20.54■□□□□ 0.88
SNIP1-202ENST00000468040 C8orf37Q96NL8 207 aa20.54■□□□□ 0.88
SNIP1-202ENST00000468040 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
SNIP1-202ENST00000468040 COL18A1P39060 1754 aa20.54■□□□□ 0.88
SNIP1-202ENST00000468040 HOXC9P31274 260 aa20.53■□□□□ 0.88
SNIP1-202ENST00000468040 MTHFSP49914 203 aa20.53■□□□□ 0.88
SNIP1-202ENST00000468040 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
SNIP1-202ENST00000468040 PEAK1Q9H792 1746 aa20.53■□□□□ 0.88
SNIP1-202ENST00000468040 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
SNIP1-202ENST00000468040 NWD2Q9ULI1 1742 aa20.52■□□□□ 0.88
SNIP1-202ENST00000468040 SLIT2O94813 1529 aa20.51■□□□□ 0.87
SNIP1-202ENST00000468040 INSRP06213 1382 aa20.5■□□□□ 0.87
SNIP1-202ENST00000468040 FNBP4Q8N3X1 1017 aaPredicted RBP20.5■□□□□ 0.87
SNIP1-202ENST00000468040 BTG4Q9NY30 223 aa20.5■□□□□ 0.87
SNIP1-202ENST00000468040 CAMTA1Q9Y6Y1 1673 aa20.5■□□□□ 0.87
SNIP1-202ENST00000468040 CFAP53Q96M91 514 aa20.49■□□□□ 0.87
SNIP1-202ENST00000468040 AXIN2Q9Y2T1 843 aa20.49■□□□□ 0.87
SNIP1-202ENST00000468040 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
SNIP1-202ENST00000468040 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
SNIP1-202ENST00000468040 EVA1CP58658 441 aa20.47■□□□□ 0.87
SNIP1-202ENST00000468040 AFF2P51816 1311 aa20.47■□□□□ 0.87
SNIP1-202ENST00000468040 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
SNIP1-202ENST00000468040 RGPD5Q99666 1765 aa20.46■□□□□ 0.87
SNIP1-202ENST00000468040 ERBB3P21860 1342 aa20.46■□□□□ 0.87
SNIP1-202ENST00000468040 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
SNIP1-202ENST00000468040 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.45■□□□□ 0.86
SNIP1-202ENST00000468040 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
SNIP1-202ENST00000468040 ANKRD24Q8TF21 1146 aa20.45■□□□□ 0.86
SNIP1-202ENST00000468040 USP21Q9UK80 565 aa20.45■□□□□ 0.86
SNIP1-202ENST00000468040 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
SNIP1-202ENST00000468040 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
SNIP1-202ENST00000468040 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
SNIP1-202ENST00000468040 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
SNIP1-202ENST00000468040 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
SNIP1-202ENST00000468040 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
SNIP1-202ENST00000468040 DIAPH1O60610 1272 aaKnown RBP20.42■□□□□ 0.86
SNIP1-202ENST00000468040 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
SNIP1-202ENST00000468040 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
SNIP1-202ENST00000468040 CRB1P82279 1406 aa20.4■□□□□ 0.86
SNIP1-202ENST00000468040 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
SNIP1-202ENST00000468040 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
SNIP1-202ENST00000468040 IL13P35225 146 aa20.39■□□□□ 0.85
SNIP1-202ENST00000468040 VPS72Q15906 364 aa20.39■□□□□ 0.85
SNIP1-202ENST00000468040 LARP1Q6PKG0 1096 aaKnown RBP20.39■□□□□ 0.85
SNIP1-202ENST00000468040 TRPC5Q9UL62 973 aaPredicted RBP20.39■□□□□ 0.85
SNIP1-202ENST00000468040 NLRP2Q9NX02 1062 aa20.38■□□□□ 0.85
SNIP1-202ENST00000468040 NUDCQ9Y266 331 aa20.38■□□□□ 0.85
SNIP1-202ENST00000468040 ATRNO75882 1429 aa20.37■□□□□ 0.85
SNIP1-202ENST00000468040 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
SNIP1-202ENST00000468040 MRS2Q9HD23 443 aa20.36■□□□□ 0.85
SNIP1-202ENST00000468040 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
SNIP1-202ENST00000468040 SPATA31A5Q5VU36 1347 aa20.35■□□□□ 0.85
SNIP1-202ENST00000468040 SPATA31A7Q8IWB4 1347 aa20.35■□□□□ 0.85
SNIP1-202ENST00000468040 CCER2I3L3R5 266 aa20.35■□□□□ 0.85
SNIP1-202ENST00000468040 MIER1Q8N108 512 aa20.35■□□□□ 0.85
SNIP1-202ENST00000468040 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
SNIP1-202ENST00000468040 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
SNIP1-202ENST00000468040 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
SNIP1-202ENST00000468040 NBPF6Q5VWK0 638 aa20.34■□□□□ 0.85
SNIP1-202ENST00000468040 NBPF4Q96M43 638 aa20.34■□□□□ 0.85
SNIP1-202ENST00000468040 EYA1Q99502 592 aa20.34■□□□□ 0.85
SNIP1-202ENST00000468040 QTRT2Q9H974 415 aaKnown RBP20.34■□□□□ 0.85
SNIP1-202ENST00000468040 U2SURPO15042 1029 aaKnown RBP20.33■□□□□ 0.85
SNIP1-202ENST00000468040 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.85
SNIP1-202ENST00000468040 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
SNIP1-202ENST00000468040 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.84
SNIP1-202ENST00000468040 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
SNIP1-202ENST00000468040 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
SNIP1-202ENST00000468040 USP35Q9P2H5 1018 aa20.32■□□□□ 0.84
SNIP1-202ENST00000468040 WDR43Q15061 677 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNIP1-202ENST00000468040 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
SNIP1-202ENST00000468040 RGS17Q9UGC6 210 aaPredicted RBP20.31■□□□□ 0.84
SNIP1-202ENST00000468040 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
SNIP1-202ENST00000468040 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNIP1-202ENST00000468040 KDRP35968 1356 aa20.3■□□□□ 0.84
SNIP1-202ENST00000468040 SULT6B1Q6IMI4 303 aa20.29■□□□□ 0.84
SNIP1-202ENST00000468040 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
SNIP1-202ENST00000468040 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
SNIP1-202ENST00000468040 GLI3P10071 1580 aa20.29■□□□□ 0.84
SNIP1-202ENST00000468040 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
SNIP1-202ENST00000468040 RBM6P78332 1123 aaKnown RBP20.27■□□□□ 0.84
SNIP1-202ENST00000468040 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
SNIP1-202ENST00000468040 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
SNIP1-202ENST00000468040 WNK3Q9BYP7 1800 aa20.26■□□□□ 0.83
SNIP1-202ENST00000468040 HMOX1P09601 288 aa20.26■□□□□ 0.83
SNIP1-202ENST00000468040 IL2RBP14784 551 aa20.26■□□□□ 0.83
SNIP1-202ENST00000468040 AEBP1Q8IUX7 1158 aa20.26■□□□□ 0.83
SNIP1-202ENST00000468040 FCHSD2O94868 740 aa20.25■□□□□ 0.83
SNIP1-202ENST00000468040 RXRBP28702 533 aa20.25■□□□□ 0.83
SNIP1-202ENST00000468040 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
SNIP1-202ENST00000468040 PNNQ9H307 717 aaKnown RBP20.25■□□□□ 0.83
SNIP1-202ENST00000468040 DISP2A7MBM2 1401 aa20.25■□□□□ 0.83
SNIP1-202ENST00000468040 PARP4Q9UKK3 1724 aaKnown RBP20.24■□□□□ 0.83
SNIP1-202ENST00000468040 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
SNIP1-202ENST00000468040 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
SNIP1-202ENST00000468040 MEGF6O75095 1541 aa20.23■□□□□ 0.83
SNIP1-202ENST00000468040 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
SNIP1-202ENST00000468040 RSPH6AQ9H0K4 717 aa20.23■□□□□ 0.83
SNIP1-202ENST00000468040 OVOS2A0A0G2JMS6 1433 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms