RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
U2AF1-207ENST00000468039 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
U2AF1-207ENST00000468039 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
U2AF1-207ENST00000468039 ABCA10Q8WWZ4 1543 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 SMPD1P17405 629 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 RFC5P40937 340 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 MMP16P51512 607 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 TMEM259Q4ZIN3 620 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 PRDM9Q9NQV7 894 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 TIMELESSQ9UNS1 1208 aa8.5□□□□□ -1.05
U2AF1-207ENST00000468039 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
U2AF1-207ENST00000468039 SNAPC4Q5SXM2 1469 aa8.49□□□□□ -1.05
U2AF1-207ENST00000468039 AP1G2O75843 785 aa8.48□□□□□ -1.05
U2AF1-207ENST00000468039 GPAT2Q6NUI2 795 aa8.48□□□□□ -1.05
U2AF1-207ENST00000468039 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
U2AF1-207ENST00000468039 SNIP1Q8TAD8 396 aaKnown RBP8.48□□□□□ -1.05
U2AF1-207ENST00000468039 GAPVD1Q14C86 1478 aa8.48□□□□□ -1.05
U2AF1-207ENST00000468039 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
U2AF1-207ENST00000468039 VEGFBP49765 207 aa8.47□□□□□ -1.05
U2AF1-207ENST00000468039 PTPRNQ16849 979 aa8.47□□□□□ -1.05
U2AF1-207ENST00000468039 NUDT12Q9BQG2 462 aa8.47□□□□□ -1.05
U2AF1-207ENST00000468039 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
U2AF1-207ENST00000468039 GRIN2BQ13224 1484 aa8.46□□□□□ -1.05
U2AF1-207ENST00000468039 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
U2AF1-207ENST00000468039 CCNYL3P0C7X3 344 aa8.45□□□□□ -1.06
U2AF1-207ENST00000468039 FOXK2Q01167 660 aa8.45□□□□□ -1.06
U2AF1-207ENST00000468039 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
U2AF1-207ENST00000468039 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
U2AF1-207ENST00000468039 PBRM1Q86U86 1689 aa8.45□□□□□ -1.06
U2AF1-207ENST00000468039 CTHP32929 405 aa8.44□□□□□ -1.06
U2AF1-207ENST00000468039 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
U2AF1-207ENST00000468039 CHD1O14646 1710 aa8.43□□□□□ -1.06
U2AF1-207ENST00000468039 FBXO31Q5XUX0 539 aaPredicted RBP8.43□□□□□ -1.06
U2AF1-207ENST00000468039 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
U2AF1-207ENST00000468039 ARXQ96QS3 562 aa8.43□□□□□ -1.06
U2AF1-207ENST00000468039 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
U2AF1-207ENST00000468039 APBB1O00213 710 aa8.42□□□□□ -1.06
U2AF1-207ENST00000468039 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
U2AF1-207ENST00000468039 SYNJ2O15056 1496 aa8.41□□□□□ -1.06
U2AF1-207ENST00000468039 CHMP7Q8WUX9 453 aaPredicted RBP8.41□□□□□ -1.06
U2AF1-207ENST00000468039 EVA1BQ9NVM1 165 aa8.41□□□□□ -1.06
U2AF1-207ENST00000468039 ADAMTS12P58397 1594 aa8.4□□□□□ -1.06
U2AF1-207ENST00000468039 WNT7AO00755 349 aa8.4□□□□□ -1.06
U2AF1-207ENST00000468039 PER1O15534 1290 aaPredicted RBP8.4□□□□□ -1.06
U2AF1-207ENST00000468039 KCNH2Q12809 1159 aa8.4□□□□□ -1.06
U2AF1-207ENST00000468039 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
U2AF1-207ENST00000468039 KIF27Q86VH2 1401 aa8.39□□□□□ -1.07
U2AF1-207ENST00000468039 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
U2AF1-207ENST00000468039 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
U2AF1-207ENST00000468039 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
U2AF1-207ENST00000468039 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
U2AF1-207ENST00000468039 ADAM23O75077 832 aa8.38□□□□□ -1.07
U2AF1-207ENST00000468039 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
U2AF1-207ENST00000468039 HPS1Q92902 700 aa8.38□□□□□ -1.07
U2AF1-207ENST00000468039 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
U2AF1-207ENST00000468039 FHAD1B1AJZ9 1412 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 J3QL48 77 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 FLIIQ13045 1269 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 GRIN2AQ12879 1464 aa8.37□□□□□ -1.07
U2AF1-207ENST00000468039 IGF1RP08069 1367 aa8.36□□□□□ -1.07
U2AF1-207ENST00000468039 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
U2AF1-207ENST00000468039 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
U2AF1-207ENST00000468039 CLASP1Q7Z460 1538 aa8.35□□□□□ -1.07
U2AF1-207ENST00000468039 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
U2AF1-207ENST00000468039 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
U2AF1-207ENST00000468039 SOCS7O14512 581 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 TRIM32Q13049 653 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 NR6A1Q15406 480 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 NBPF14Q5TI25 921 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
U2AF1-207ENST00000468039 SNRKQ9NRH2 765 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
U2AF1-207ENST00000468039 HMX1Q9NP08 348 aaPredicted RBP8.33□□□□□ -1.08
U2AF1-207ENST00000468039 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
U2AF1-207ENST00000468039 NUP160Q12769 1436 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 MTMR14Q8NCE2 650 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
U2AF1-207ENST00000468039 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 CARMIL1Q5VZK9 1371 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 RIMBP3CA6NJZ7 1639 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 RIMBP3BA6NNM3 1639 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 RIMBP3Q9UFD9 1639 aa8.32□□□□□ -1.08
U2AF1-207ENST00000468039 CUL7Q14999 1698 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 MCM6Q14566 821 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 AGERQ15109 404 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 BAP1Q92560 729 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 FKBPLQ9UIM3 349 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 NDUFB9Q9Y6M9 179 aa8.31□□□□□ -1.08
U2AF1-207ENST00000468039 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
U2AF1-207ENST00000468039 WNT7BP56706 349 aa8.3□□□□□ -1.08
U2AF1-207ENST00000468039 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
U2AF1-207ENST00000468039 FAM9AQ8IZU1 332 aaPredicted RBP8.3□□□□□ -1.08
U2AF1-207ENST00000468039 MRGPRX2Q96LB1 330 aa8.3□□□□□ -1.08
U2AF1-207ENST00000468039 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
U2AF1-207ENST00000468039 RAD21O60216 631 aa8.29□□□□□ -1.08
U2AF1-207ENST00000468039 UBTFP17480 764 aaKnown RBP8.29□□□□□ -1.08
U2AF1-207ENST00000468039 KANK3Q6NY19 840 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms