RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
SSR3-204ENST00000467733 C1QTNF2Q9BXJ5 285 aa8.16□□□□□ -1.1
SSR3-204ENST00000467733 PPFIA3O75145 1194 aa8.15□□□□□ -1.1
SSR3-204ENST00000467733 FSHRP23945 695 aa8.15□□□□□ -1.1
SSR3-204ENST00000467733 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SSR3-204ENST00000467733 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
SSR3-204ENST00000467733 TSC1Q92574 1164 aa8.15□□□□□ -1.1
SSR3-204ENST00000467733 WIZO95785 1651 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 CFTRP13569 1480 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 SOS2Q07890 1332 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 NUTM2BA6NNL0 878 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 NUTM2EB1AL46 878 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 TRIM66O15016 1216 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 PER1O15534 1290 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 NUTM2DQ5VT03 806 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 SH3RF1Q7Z6J0 888 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 NUTM2AQ8IVF1 878 aaPredicted RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 TSEN34Q9BSV6 310 aaKnown RBP8.14□□□□□ -1.11
SSR3-204ENST00000467733 EMILIN1Q9Y6C2 1016 aa8.14□□□□□ -1.11
SSR3-204ENST00000467733 VASH1Q7L8A9 365 aaPredicted RBP8.13□□□□□ -1.11
SSR3-204ENST00000467733 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.113e-6■■□□□ 13.5
SSR3-204ENST00000467733 AK7Q96M32 723 aa8.13□□□□□ -1.11
SSR3-204ENST00000467733 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
SSR3-204ENST00000467733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.11□□□□□ -1.11
SSR3-204ENST00000467733 MYSM1Q5VVJ2 828 aa8.11□□□□□ -1.11
SSR3-204ENST00000467733 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
SSR3-204ENST00000467733 DNMT3LQ9UJW3 386 aa8.11□□□□□ -1.11
SSR3-204ENST00000467733 CHD1O14646 1710 aa8.11□□□□□ -1.11
SSR3-204ENST00000467733 ARAP1Q96P48 1450 aa8.11□□□□□ -1.11
SSR3-204ENST00000467733 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
SSR3-204ENST00000467733 LILRB3O75022 631 aa8.1□□□□□ -1.11
SSR3-204ENST00000467733 QPCTQ16769 361 aa8.1□□□□□ -1.11
SSR3-204ENST00000467733 LIMD1Q9UGP4 676 aa8.1□□□□□ -1.11
SSR3-204ENST00000467733 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
SSR3-204ENST00000467733 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
SSR3-204ENST00000467733 IFT140Q96RY7 1462 aa8.09□□□□□ -1.11
SSR3-204ENST00000467733 RNF225M0QZC1 329 aaPredicted RBP8.09□□□□□ -1.11
SSR3-204ENST00000467733 KCNMA1Q12791 1236 aa8.09□□□□□ -1.11
SSR3-204ENST00000467733 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
SSR3-204ENST00000467733 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
SSR3-204ENST00000467733 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
SSR3-204ENST00000467733 RSF1Q96T23 1441 aaPredicted RBP8.06□□□□□ -1.12
SSR3-204ENST00000467733 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
SSR3-204ENST00000467733 CARD14Q9BXL6 1004 aa8.06□□□□□ -1.12
SSR3-204ENST00000467733 LOC100996750A0A140TA64 210 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 PTSQ03393 145 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 PDE4DQ08499 809 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 ERFEQ4G0M1 354 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 CYB5RLQ6IPT4 315 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
SSR3-204ENST00000467733 TOP2AP11388 1531 aaKnown RBP8.04□□□□□ -1.12
SSR3-204ENST00000467733 SPINT1O43278 529 aa8.04□□□□□ -1.12
SSR3-204ENST00000467733 DHX9Q08211 1270 aaKnown RBP8.04□□□□□ -1.12
SSR3-204ENST00000467733 PPP1R26Q5T8A7 1209 aaPredicted RBP8.04□□□□□ -1.12
SSR3-204ENST00000467733 Q6ZVU0 165 aa8.04□□□□□ -1.12
SSR3-204ENST00000467733 SLC10A4Q96EP9 437 aa8.04□□□□□ -1.12
SSR3-204ENST00000467733 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
SSR3-204ENST00000467733 KRT76Q01546 638 aa8.03□□□□□ -1.12
SSR3-204ENST00000467733 RTL5Q5HYW3 569 aaPredicted RBP8.03□□□□□ -1.12
SSR3-204ENST00000467733 PDXDC2PQ6P474 469 aa8.03□□□□□ -1.12
SSR3-204ENST00000467733 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
SSR3-204ENST00000467733 CNTNAP3BQ96NU0 1288 aa8.03□□□□□ -1.12
SSR3-204ENST00000467733 CNTNAP3Q9BZ76 1288 aa8.03□□□□□ -1.12
SSR3-204ENST00000467733 TOPBP1Q92547 1522 aa8.03□□□□□ -1.12
SSR3-204ENST00000467733 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.13
SSR3-204ENST00000467733 ZC3H4Q9UPT8 1303 aaKnown RBP8.02□□□□□ -1.13
SSR3-204ENST00000467733 TARBP1Q13395 1621 aaKnown RBP8.01□□□□□ -1.13
SSR3-204ENST00000467733 GSK3AP49840 483 aa8.01□□□□□ -1.13
SSR3-204ENST00000467733 TMEM151AQ8N4L1 468 aa8.01□□□□□ -1.13
SSR3-204ENST00000467733 KCTD17Q8N5Z5 321 aa8.01□□□□□ -1.13
SSR3-204ENST00000467733 CCDC155Q8N6L0 562 aa8.01□□□□□ -1.13
SSR3-204ENST00000467733 GPR161Q8N6U8 529 aaKnown RBP8.01□□□□□ -1.13
SSR3-204ENST00000467733 KCTD15Q96SI1 283 aaPredicted RBP8□□□□□ -1.13
SSR3-204ENST00000467733 COL25A1Q9BXS0 654 aaPredicted RBP8□□□□□ -1.13
SSR3-204ENST00000467733 FKBPLQ9UIM3 349 aa8□□□□□ -1.13
SSR3-204ENST00000467733 DNMBPQ6XZF7 1577 aa8□□□□□ -1.13
SSR3-204ENST00000467733 CLASP1Q7Z460 1538 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 GDF11O95390 407 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 RASSF7Q02833 373 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 CBLBQ13191 982 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 SVOPQ8N4V2 548 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 BCANQ96GW7 911 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 ADAMTS8Q9UP79 889 aa7.99□□□□□ -1.13
SSR3-204ENST00000467733 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
SSR3-204ENST00000467733 SLC35F4A4IF30 521 aa7.98□□□□□ -1.13
SSR3-204ENST00000467733 ITGA6P23229 1130 aa7.98□□□□□ -1.13
SSR3-204ENST00000467733 SUZ12Q15022 739 aaKnown RBP7.98□□□□□ -1.13
SSR3-204ENST00000467733 ZBTB33Q86T24 672 aa7.98□□□□□ -1.13
SSR3-204ENST00000467733 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
SSR3-204ENST00000467733 SLURP2P0DP57 97 aa7.96□□□□□ -1.14
SSR3-204ENST00000467733 PTK2Q05397 1052 aa7.96□□□□□ -1.14
SSR3-204ENST00000467733 NBPF20Q3BBV1 942 aa7.96□□□□□ -1.14
SSR3-204ENST00000467733 INTS6LQ5JSJ4 861 aaKnown RBP7.96□□□□□ -1.14
SSR3-204ENST00000467733 ZNF385CQ66K41 422 aaPredicted RBP7.96□□□□□ -1.14
SSR3-204ENST00000467733 SV2AQ7L0J3 742 aa7.96□□□□□ -1.14
SSR3-204ENST00000467733 POLR3EQ9NVU0 708 aa7.96□□□□□ -1.14
SSR3-204ENST00000467733 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms