RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 SPATA31A7Q8IWB4 1347 aa35.91■■■■□ 3.34
PDCD4-205ENST00000467574 PANK3Q9H999 370 aa35.91■■■■□ 3.34
PDCD4-205ENST00000467574 BRWD3Q6RI45 1802 aa35.9■■■■□ 3.34
PDCD4-205ENST00000467574 STRN4Q9NRL3 753 aa35.9■■■■□ 3.34
PDCD4-205ENST00000467574 AXIN2Q9Y2T1 843 aa35.9■■■■□ 3.34
PDCD4-205ENST00000467574 WASHC2AQ641Q2 1341 aa35.89■■■■□ 3.34
PDCD4-205ENST00000467574 CCDC9Q9Y3X0 531 aaKnown RBP35.89■■■■□ 3.34
PDCD4-205ENST00000467574 THSD7AQ9UPZ6 1657 aa35.88■■■■□ 3.33
PDCD4-205ENST00000467574 CGNL1Q0VF96 1302 aa35.85■■■■□ 3.33
PDCD4-205ENST00000467574 SPATA31A1Q5TZJ5 1347 aa35.85■■■■□ 3.33
PDCD4-205ENST00000467574 EP400Q96L91 3159 aa35.85■■■■□ 3.33
PDCD4-205ENST00000467574 LARP1Q6PKG0 1096 aaKnown RBP35.85■■■■□ 3.33
PDCD4-205ENST00000467574 ONECUT3O60422 494 aaPredicted RBP35.84■■■■□ 3.33
PDCD4-205ENST00000467574 FBLN1P23142 703 aa35.82■■■■□ 3.32
PDCD4-205ENST00000467574 EVA1CP58658 441 aa35.82■■■■□ 3.32
PDCD4-205ENST00000467574 CRB1P82279 1406 aa35.81■■■■□ 3.32
PDCD4-205ENST00000467574 WNK3Q9BYP7 1800 aa35.8■■■■□ 3.32
PDCD4-205ENST00000467574 MAP3K19Q56UN5 1328 aa35.8■■■■□ 3.32
PDCD4-205ENST00000467574 PEAK1Q9H792 1746 aa35.8■■■■□ 3.32
PDCD4-205ENST00000467574 FAM98CQ17RN3 349 aaKnown RBP35.78■■■■□ 3.32
PDCD4-205ENST00000467574 WDR17Q8IZU2 1322 aa35.78■■■■□ 3.32
PDCD4-205ENST00000467574 BLMP54132 1417 aaPredicted RBP35.76■■■■□ 3.32
PDCD4-205ENST00000467574 SEPT12Q8IYM1 358 aa35.76■■■■□ 3.32
PDCD4-205ENST00000467574 MAP2P11137 1827 aaKnown RBP35.75■■■■□ 3.31
PDCD4-205ENST00000467574 ERBB3P21860 1342 aa35.74■■■■□ 3.31
PDCD4-205ENST00000467574 RTL1A6NKG5 1358 aa35.74■■■■□ 3.31
PDCD4-205ENST00000467574 NSD2O96028 1365 aa35.74■■■■□ 3.31
PDCD4-205ENST00000467574 FAM208AQ9UK61 1670 aaKnown RBP35.73■■■■□ 3.31
PDCD4-205ENST00000467574 RRS1Q15050 365 aaKnown RBP35.73■■■■□ 3.31
PDCD4-205ENST00000467574 IP6K1Q92551 441 aa35.73■■■■□ 3.31
PDCD4-205ENST00000467574 USP35Q9P2H5 1018 aa35.72■■■■□ 3.31
PDCD4-205ENST00000467574 PARP4Q9UKK3 1724 aaKnown RBP35.71■■■■□ 3.31
PDCD4-205ENST00000467574 BARGINQ6ZT62 677 aa35.71■■■■□ 3.31
PDCD4-205ENST00000467574 ZEB1P37275 1124 aaPredicted RBP35.7■■■■□ 3.31
PDCD4-205ENST00000467574 TCP11L2Q8N4U5 519 aa35.7■■■■□ 3.31
PDCD4-205ENST00000467574 PER1O15534 1290 aaPredicted RBP35.69■■■■□ 3.3
PDCD4-205ENST00000467574 HOXC9P31274 260 aa35.69■■■■□ 3.3
PDCD4-205ENST00000467574 AMER1Q5JTC6 1135 aaPredicted RBP35.68■■■■□ 3.3
PDCD4-205ENST00000467574 TOM1L2Q6ZVM7 507 aa35.68■■■■□ 3.3
PDCD4-205ENST00000467574 THRAP3Q9Y2W1 955 aaKnown RBP35.68■■■■□ 3.3
PDCD4-205ENST00000467574 KNSTRNQ9Y448 316 aa35.68■■■■□ 3.3
PDCD4-205ENST00000467574 RGPD2P0DJD1 1756 aa35.68■■■■□ 3.3
PDCD4-205ENST00000467574 ANKRD24Q8TF21 1146 aa35.66■■■■□ 3.3
PDCD4-205ENST00000467574 KIF24Q5T7B8 1368 aa35.65■■■■□ 3.3
PDCD4-205ENST00000467574 LRRC37A3O60309 1634 aa35.65■■■■□ 3.3
PDCD4-205ENST00000467574 AMPHP49418 695 aa35.65■■■■□ 3.3
PDCD4-205ENST00000467574 CARD10Q9BWT7 1032 aa35.65■■■■□ 3.3
PDCD4-205ENST00000467574 CSB-PGBD3P0DP91 1061 aa35.64■■■■□ 3.3
PDCD4-205ENST00000467574 A0A0G2JS52 829 aa35.63■■■■□ 3.29
PDCD4-205ENST00000467574 MYT1Q01538 1121 aa35.63■■■■□ 3.29
PDCD4-205ENST00000467574 FLT4P35916 1363 aa35.63■■■■□ 3.29
PDCD4-205ENST00000467574 EMILIN1Q9Y6C2 1016 aa35.62■■■■□ 3.29
PDCD4-205ENST00000467574 DISP2A7MBM2 1401 aa35.62■■■■□ 3.29
PDCD4-205ENST00000467574 KRT27Q7Z3Y8 459 aa35.59■■■■□ 3.29
PDCD4-205ENST00000467574 UPF1Q92900 1129 aaKnown RBP eCLIP35.58■■■■□ 3.29
PDCD4-205ENST00000467574 INSRP06213 1382 aa35.58■■■■□ 3.29
PDCD4-205ENST00000467574 SMG6Q86US8 1419 aaKnown RBP35.57■■■■□ 3.29
PDCD4-205ENST00000467574 POLKQ9UBT6 870 aa35.56■■■■□ 3.28
PDCD4-205ENST00000467574 NPC1L1Q9UHC9 1359 aa35.55■■■■□ 3.28
PDCD4-205ENST00000467574 TNNT2P45379 298 aaPredicted RBP35.55■■■■□ 3.28
PDCD4-205ENST00000467574 HSP90AB2PQ58FF8 381 aa35.55■■■■□ 3.28
PDCD4-205ENST00000467574 LTV1Q96GA3 475 aaPredicted RBP35.55■■■■□ 3.28
PDCD4-205ENST00000467574 NLRP2Q9NX02 1062 aa35.55■■■■□ 3.28
PDCD4-205ENST00000467574 MORC1Q86VD1 984 aa35.53■■■■□ 3.28
PDCD4-205ENST00000467574 CDCA7Q9BWT1 371 aaPredicted RBP35.48■■■■□ 3.27
PDCD4-205ENST00000467574 PPM1GO15355 546 aaPredicted RBP35.47■■■■□ 3.27
PDCD4-205ENST00000467574 CC2D1BQ5T0F9 858 aaKnown RBP35.46■■■■□ 3.27
PDCD4-205ENST00000467574 FAM182BQ5T319 152 aa35.46■■■■□ 3.27
PDCD4-205ENST00000467574 TNS2Q63HR2 1409 aa35.45■■■■□ 3.27
PDCD4-205ENST00000467574 NCAPD2Q15021 1401 aa35.43■■■■□ 3.26
PDCD4-205ENST00000467574 NBPF6Q5VWK0 638 aa35.43■■■■□ 3.26
PDCD4-205ENST00000467574 NBPF4Q96M43 638 aa35.43■■■■□ 3.26
PDCD4-205ENST00000467574 DDB1Q16531 1140 aa35.42■■■■□ 3.26
PDCD4-205ENST00000467574 SHANK3Q9BYB0 1731 aa35.41■■■■□ 3.26
PDCD4-205ENST00000467574 TNS1Q9HBL0 1735 aaKnown RBP35.41■■■■□ 3.26
PDCD4-205ENST00000467574 PDE3BQ13370 1112 aa35.41■■■■□ 3.26
PDCD4-205ENST00000467574 RGPD1P0DJD0 1748 aa35.4■■■■□ 3.26
PDCD4-205ENST00000467574 IL2RBP14784 551 aa35.4■■■■□ 3.26
PDCD4-205ENST00000467574 SBF2Q86WG5 1849 aa35.4■■■■□ 3.26
PDCD4-205ENST00000467574 MEGF6O75095 1541 aa35.4■■■■□ 3.26
PDCD4-205ENST00000467574 USHBP1Q8N6Y0 703 aa35.37■■■■□ 3.25
PDCD4-205ENST00000467574 OVOS2A0A0G2JMS6 1433 aa35.36■■■■□ 3.25
PDCD4-205ENST00000467574 EIF4A2Q14240 407 aaKnown RBP35.35■■■■□ 3.25
PDCD4-205ENST00000467574 FAM196AQ6ZSG2 479 aa35.33■■■■□ 3.25
PDCD4-205ENST00000467574 MARCH10Q8NA82 808 aaPredicted RBP35.33■■■■□ 3.25
PDCD4-205ENST00000467574 CCDC125Q86Z20 511 aa35.32■■■■□ 3.24
PDCD4-205ENST00000467574 EXOC5O00471 708 aa35.31■■■■□ 3.24
PDCD4-205ENST00000467574 CNGB1Q14028 1251 aaPredicted RBP35.31■■■■□ 3.24
PDCD4-205ENST00000467574 BCL9O00512 1426 aa35.31■■■■□ 3.24
PDCD4-205ENST00000467574 EYA1Q99502 592 aa35.3■■■■□ 3.24
PDCD4-205ENST00000467574 PKD1L3Q7Z443 1732 aa35.29■■■■□ 3.24
PDCD4-205ENST00000467574 MTHFSP49914 203 aa35.28■■■■□ 3.24
PDCD4-205ENST00000467574 COL3A1P02461 1466 aaPredicted RBP35.26■■■■□ 3.23
PDCD4-205ENST00000467574 IGSF1Q8N6C5 1336 aa35.25■■■■□ 3.23
PDCD4-205ENST00000467574 DDX10Q13206 875 aaKnown RBP35.24■■■■□ 3.23
PDCD4-205ENST00000467574 NHSQ6T4R5 1651 aa35.21■■■■□ 3.23
PDCD4-205ENST00000467574 TRIM37O94972 964 aa35.21■■■■□ 3.23
PDCD4-205ENST00000467574 RAPGEF4Q8WZA2 1011 aa35.21■■■■□ 3.23
PDCD4-205ENST00000467574 IL13P35225 146 aa35.2■■■■□ 3.23
PDCD4-205ENST00000467574 PARD3Q8TEW0 1356 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms