RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
SLF1-203ENST00000466957 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
SLF1-203ENST00000466957 UPP2O95045 317 aa12.56□□□□□ -0.4
SLF1-203ENST00000466957 NFX1Q12986 1120 aaKnown RBP12.56□□□□□ -0.4
SLF1-203ENST00000466957 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
SLF1-203ENST00000466957 ADAM32Q8TC27 787 aa12.55□□□□□ -0.4
SLF1-203ENST00000466957 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
SLF1-203ENST00000466957 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
SLF1-203ENST00000466957 GPSM3Q9Y4H4 160 aa12.55□□□□□ -0.4
SLF1-203ENST00000466957 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
SLF1-203ENST00000466957 BMP2P12643 396 aa12.53□□□□□ -0.4
SLF1-203ENST00000466957 LCE2AQ5TA79 106 aaPredicted RBP12.53□□□□□ -0.4
SLF1-203ENST00000466957 LINC00528Q8N1L1 170 aa12.53□□□□□ -0.4
SLF1-203ENST00000466957 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
SLF1-203ENST00000466957 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
SLF1-203ENST00000466957 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
SLF1-203ENST00000466957 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
SLF1-203ENST00000466957 TRIM34Q9BYJ4 488 aa12.51□□□□□ -0.41
SLF1-203ENST00000466957 NXF1Q9UBU9 619 aaKnown RBP12.51□□□□□ -0.41
SLF1-203ENST00000466957 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
SLF1-203ENST00000466957 RAB15P59190 212 aa12.49□□□□□ -0.41
SLF1-203ENST00000466957 NBPF20Q3BBV1 942 aa12.49□□□□□ -0.41
SLF1-203ENST00000466957 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
SLF1-203ENST00000466957 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
SLF1-203ENST00000466957 VEGFBP49765 207 aa12.48□□□□□ -0.41
SLF1-203ENST00000466957 DHX9Q08211 1270 aaKnown RBP12.48□□□□□ -0.41
SLF1-203ENST00000466957 MAN1A2O60476 641 aa12.47□□□□□ -0.41
SLF1-203ENST00000466957 CBLBQ13191 982 aa12.47□□□□□ -0.41
SLF1-203ENST00000466957 TSEN34Q9BSV6 310 aaKnown RBP12.46□□□□□ -0.41
SLF1-203ENST00000466957 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
SLF1-203ENST00000466957 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
SLF1-203ENST00000466957 LCE2CQ5TA81 110 aa12.42□□□□□ -0.42
SLF1-203ENST00000466957 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
SLF1-203ENST00000466957 BANK1Q8NDB2 785 aa12.41□□□□□ -0.42
SLF1-203ENST00000466957 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
SLF1-203ENST00000466957 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
SLF1-203ENST00000466957 Q6ZVU0 165 aa12.4□□□□□ -0.42
SLF1-203ENST00000466957 IRF7Q92985 503 aa12.4□□□□□ -0.42
SLF1-203ENST00000466957 SOS2Q07890 1332 aaPredicted RBP12.39□□□□□ -0.43
SLF1-203ENST00000466957 FBXO45P0C2W1 286 aa12.39□□□□□ -0.43
SLF1-203ENST00000466957 H3BM21 787 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 ERVH48-1M5A8F1 160 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 WIPF1O43516 503 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 PRKCSHP14314 528 aaPredicted RBP12.38□□□□□ -0.43
SLF1-203ENST00000466957 RELBQ01201 579 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
SLF1-203ENST00000466957 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
SLF1-203ENST00000466957 TTLL8A6PVC2 850 aa12.37□□□□□ -0.43
SLF1-203ENST00000466957 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
SLF1-203ENST00000466957 NDUFB9Q9Y6M9 179 aa12.37□□□□□ -0.43
SLF1-203ENST00000466957 APBB1O00213 710 aa12.36□□□□□ -0.43
SLF1-203ENST00000466957 SNRKQ9NRH2 765 aa12.36□□□□□ -0.43
SLF1-203ENST00000466957 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
SLF1-203ENST00000466957 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
SLF1-203ENST00000466957 ESPNB1AK53 854 aa12.34□□□□□ -0.43
SLF1-203ENST00000466957 SPINT1O43278 529 aa12.34□□□□□ -0.43
SLF1-203ENST00000466957 GMPRP36959 345 aa12.34□□□□□ -0.43
SLF1-203ENST00000466957 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.33□□□□□ -0.44
SLF1-203ENST00000466957 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
SLF1-203ENST00000466957 ZNF395Q9H8N7 513 aaPredicted RBP12.33□□□□□ -0.44
SLF1-203ENST00000466957 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
SLF1-203ENST00000466957 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
SLF1-203ENST00000466957 NR1H3Q13133 447 aa12.32□□□□□ -0.44
SLF1-203ENST00000466957 POLMQ9NP87 494 aaPredicted RBP12.32□□□□□ -0.44
SLF1-203ENST00000466957 CYLDQ9NQC7 956 aa12.32□□□□□ -0.44
SLF1-203ENST00000466957 ZNF330Q9Y3S2 320 aaPredicted RBP12.32□□□□□ -0.44
SLF1-203ENST00000466957 SOCS7O14512 581 aa12.31□□□□□ -0.44
SLF1-203ENST00000466957 ADH1AP07327 375 aa12.31□□□□□ -0.44
SLF1-203ENST00000466957 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
SLF1-203ENST00000466957 LILRA1O75019 489 aa12.3□□□□□ -0.44
SLF1-203ENST00000466957 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
SLF1-203ENST00000466957 CTSOP43234 321 aaPredicted RBP12.29□□□□□ -0.44
SLF1-203ENST00000466957 TRIM52Q96A61 297 aa12.29□□□□□ -0.44
SLF1-203ENST00000466957 ADD1P35611 737 aaKnown RBP12.28□□□□□ -0.44
SLF1-203ENST00000466957 GPR37L1O60883 481 aa12.27□□□□□ -0.45
SLF1-203ENST00000466957 PTSQ03393 145 aa12.27□□□□□ -0.45
SLF1-203ENST00000466957 ZNF592Q92610 1267 aa12.27□□□□□ -0.45
SLF1-203ENST00000466957 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
SLF1-203ENST00000466957 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
SLF1-203ENST00000466957 PTGIRP43119 386 aa12.25□□□□□ -0.45
SLF1-203ENST00000466957 MCCD1P59942 119 aaPredicted RBP12.25□□□□□ -0.45
SLF1-203ENST00000466957 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
SLF1-203ENST00000466957 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
SLF1-203ENST00000466957 VSIG8P0DPA2 414 aa12.22□□□□□ -0.45
SLF1-203ENST00000466957 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
SLF1-203ENST00000466957 PCDHB11Q9Y5F2 797 aa12.22□□□□□ -0.45
SLF1-203ENST00000466957 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
SLF1-203ENST00000466957 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
SLF1-203ENST00000466957 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
SLF1-203ENST00000466957 KDF1Q8NAX2 398 aaPredicted RBP12.21□□□□□ -0.45
SLF1-203ENST00000466957 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
SLF1-203ENST00000466957 CCDC155Q8N6L0 562 aa12.2□□□□□ -0.46
SLF1-203ENST00000466957 ZSCAN1Q8NBB4 408 aa12.19□□□□□ -0.46
SLF1-203ENST00000466957 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
SLF1-203ENST00000466957 MEN1O00255 615 aa12.18□□□□□ -0.46
SLF1-203ENST00000466957 ERVK-9P63128 1117 aa12.18□□□□□ -0.46
SLF1-203ENST00000466957 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
SLF1-203ENST00000466957 SCTRP47872 440 aa12.16□□□□□ -0.46
SLF1-203ENST00000466957 LYSMD3Q7Z3D4 306 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms