RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ARHGAP9Q9BRR9 750 aa8.38□□□□□ -1.07
CCDC58-203ENST00000466854 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
CCDC58-203ENST00000466854 H3BM21 787 aa8.37□□□□□ -1.07
CCDC58-203ENST00000466854 USP17L8P0C7I0 530 aa8.37□□□□□ -1.07
CCDC58-203ENST00000466854 C6orf118Q5T5N4 469 aa8.37□□□□□ -1.07
CCDC58-203ENST00000466854 NPAS3Q8IXF0 933 aa8.37□□□□□ -1.07
CCDC58-203ENST00000466854 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
CCDC58-203ENST00000466854 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
CCDC58-203ENST00000466854 RFC5P40937 340 aa8.36□□□□□ -1.07
CCDC58-203ENST00000466854 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
CCDC58-203ENST00000466854 ERBB4Q15303 1308 aa8.35□□□□□ -1.07
CCDC58-203ENST00000466854 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
CCDC58-203ENST00000466854 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
CCDC58-203ENST00000466854 GMPRP36959 345 aa8.34□□□□□ -1.07
CCDC58-203ENST00000466854 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
CCDC58-203ENST00000466854 SLC10A4Q96EP9 437 aa8.34□□□□□ -1.07
CCDC58-203ENST00000466854 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
CCDC58-203ENST00000466854 GOPCQ9HD26 462 aa8.34□□□□□ -1.07
CCDC58-203ENST00000466854 BMP2P12643 396 aa8.33□□□□□ -1.08
CCDC58-203ENST00000466854 ZBTB33Q86T24 672 aa8.33□□□□□ -1.08
CCDC58-203ENST00000466854 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
CCDC58-203ENST00000466854 NEUROD2Q15784 382 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 ADAM32Q8TC27 787 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 IRF7Q92985 503 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 DNMT3LQ9UJW3 386 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
CCDC58-203ENST00000466854 MAN1A2O60476 641 aa8.31□□□□□ -1.08
CCDC58-203ENST00000466854 UPP2O95045 317 aa8.31□□□□□ -1.08
CCDC58-203ENST00000466854 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
CCDC58-203ENST00000466854 PTK2Q05397 1052 aa8.31□□□□□ -1.08
CCDC58-203ENST00000466854 CBLBQ13191 982 aa8.31□□□□□ -1.08
CCDC58-203ENST00000466854 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
CCDC58-203ENST00000466854 Q6ZVU0 165 aa8.31□□□□□ -1.08
CCDC58-203ENST00000466854 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
CCDC58-203ENST00000466854 TSEN34Q9BSV6 310 aaKnown RBP8.3□□□□□ -1.08
CCDC58-203ENST00000466854 VSIG8P0DPA2 414 aa8.29□□□□□ -1.08
CCDC58-203ENST00000466854 BRPF1P55201 1214 aaPredicted RBP8.29□□□□□ -1.08
CCDC58-203ENST00000466854 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
CCDC58-203ENST00000466854 PCMTD1Q96MG8 357 aaPredicted RBP8.29□□□□□ -1.08
CCDC58-203ENST00000466854 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
CCDC58-203ENST00000466854 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.28□□□□□ -1.08
CCDC58-203ENST00000466854 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
CCDC58-203ENST00000466854 SPINT1O43278 529 aa8.26□□□□□ -1.09
CCDC58-203ENST00000466854 PPFIA3O75145 1194 aa8.26□□□□□ -1.09
CCDC58-203ENST00000466854 DHX9Q08211 1270 aaKnown RBP8.26□□□□□ -1.09
CCDC58-203ENST00000466854 TMEM259Q4ZIN3 620 aa8.26□□□□□ -1.09
CCDC58-203ENST00000466854 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
CCDC58-203ENST00000466854 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
CCDC58-203ENST00000466854 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
CCDC58-203ENST00000466854 NBPF20Q3BBV1 942 aa8.25□□□□□ -1.09
CCDC58-203ENST00000466854 AGBL1Q96MI9 1066 aa8.25□□□□□ -1.09
CCDC58-203ENST00000466854 TMPRSS4Q9NRS4 437 aa8.25□□□□□ -1.09
CCDC58-203ENST00000466854 ESPNB1AK53 854 aa8.24□□□□□ -1.09
CCDC58-203ENST00000466854 XP32Q5T750 250 aa8.24□□□□□ -1.09
CCDC58-203ENST00000466854 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
CCDC58-203ENST00000466854 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
CCDC58-203ENST00000466854 RAB15P59190 212 aa8.23□□□□□ -1.09
CCDC58-203ENST00000466854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.09
CCDC58-203ENST00000466854 DZIP3Q86Y13 1208 aaKnown RBP8.23□□□□□ -1.09
CCDC58-203ENST00000466854 FIGNL2A6NMB9 653 aa8.22□□□□□ -1.09
CCDC58-203ENST00000466854 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
CCDC58-203ENST00000466854 LILRA1O75019 489 aa8.22□□□□□ -1.09
CCDC58-203ENST00000466854 RELBQ01201 579 aa8.22□□□□□ -1.09
CCDC58-203ENST00000466854 ZSCAN1Q8NBB4 408 aa8.22□□□□□ -1.09
CCDC58-203ENST00000466854 GPR37L1O60883 481 aa8.21□□□□□ -1.1
CCDC58-203ENST00000466854 FBXO45P0C2W1 286 aa8.21□□□□□ -1.1
CCDC58-203ENST00000466854 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
CCDC58-203ENST00000466854 CTSOP43234 321 aaPredicted RBP8.21□□□□□ -1.1
CCDC58-203ENST00000466854 PTSQ03393 145 aa8.21□□□□□ -1.1
CCDC58-203ENST00000466854 KDF1Q8NAX2 398 aaPredicted RBP8.21□□□□□ -1.1
CCDC58-203ENST00000466854 TPRNQ4KMQ1 711 aa8.2□□□□□ -1.1
CCDC58-203ENST00000466854 INSM2Q96T92 566 aaPredicted RBP8.2□□□□□ -1.1
CCDC58-203ENST00000466854 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
CCDC58-203ENST00000466854 ZBBXA8MT70 800 aa8.19□□□□□ -1.1
CCDC58-203ENST00000466854 ADH1AP07327 375 aa8.19□□□□□ -1.1
CCDC58-203ENST00000466854 ZNF395Q9H8N7 513 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-203ENST00000466854 GPR161Q8N6U8 529 aaKnown RBP8.18□□□□□ -1.1
CCDC58-203ENST00000466854 MTMR14Q8NCE2 650 aa8.18□□□□□ -1.1
CCDC58-203ENST00000466854 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
CCDC58-203ENST00000466854 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-203ENST00000466854 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
CCDC58-203ENST00000466854 RNF217Q8TC41 542 aa8.17□□□□□ -1.1
CCDC58-203ENST00000466854 PCDHB9Q9Y5E1 797 aa8.17□□□□□ -1.1
CCDC58-203ENST00000466854 SLC35F4A4IF30 521 aa8.16□□□□□ -1.1
CCDC58-203ENST00000466854 KRT76Q01546 638 aa8.16□□□□□ -1.1
CCDC58-203ENST00000466854 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-203ENST00000466854 CCDC155Q8N6L0 562 aa8.16□□□□□ -1.1
CCDC58-203ENST00000466854 BANK1Q8NDB2 785 aa8.16□□□□□ -1.1
CCDC58-203ENST00000466854 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
CCDC58-203ENST00000466854 CYLDQ9NQC7 956 aa8.16□□□□□ -1.1
CCDC58-203ENST00000466854 SOCS7O14512 581 aa8.15□□□□□ -1.1
CCDC58-203ENST00000466854 PTGIRP43119 386 aa8.15□□□□□ -1.1
CCDC58-203ENST00000466854 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
CCDC58-203ENST00000466854 NANOS1Q8WY41 292 aaKnown RBP8.14□□□□□ -1.11
CCDC58-203ENST00000466854 SNRKQ9NRH2 765 aa8.14□□□□□ -1.11
CCDC58-203ENST00000466854 NR1H3Q13133 447 aa8.13□□□□□ -1.11
CCDC58-203ENST00000466854 ITGA6P23229 1130 aa8.12□□□□□ -1.11
CCDC58-203ENST00000466854 NDUFB9Q9Y6M9 179 aa8.11□□□□□ -1.11
CCDC58-203ENST00000466854 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms