RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
LSG1-206ENST00000466391 PTK2Q05397 1052 aa12.44□□□□□ -0.42
LSG1-206ENST00000466391 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
LSG1-206ENST00000466391 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
LSG1-206ENST00000466391 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
LSG1-206ENST00000466391 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
LSG1-206ENST00000466391 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
LSG1-206ENST00000466391 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
LSG1-206ENST00000466391 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
LSG1-206ENST00000466391 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
LSG1-206ENST00000466391 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
LSG1-206ENST00000466391 NESP48681 1621 aa12.42□□□□□ -0.42
LSG1-206ENST00000466391 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
LSG1-206ENST00000466391 FBXO45P0C2W1 286 aa12.42□□□□□ -0.42
LSG1-206ENST00000466391 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
LSG1-206ENST00000466391 GPSM3Q9Y4H4 160 aa12.42□□□□□ -0.42
LSG1-206ENST00000466391 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
LSG1-206ENST00000466391 VAC14Q08AM6 782 aa12.41□□□□□ -0.42
LSG1-206ENST00000466391 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
LSG1-206ENST00000466391 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
LSG1-206ENST00000466391 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
LSG1-206ENST00000466391 NR1H3Q13133 447 aa12.4□□□□□ -0.42
LSG1-206ENST00000466391 SH3RF1Q7Z6J0 888 aa12.4□□□□□ -0.42
LSG1-206ENST00000466391 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
LSG1-206ENST00000466391 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.42
LSG1-206ENST00000466391 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
LSG1-206ENST00000466391 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
LSG1-206ENST00000466391 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
LSG1-206ENST00000466391 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
LSG1-206ENST00000466391 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
LSG1-206ENST00000466391 RGS20O76081 388 aa12.38□□□□□ -0.43
LSG1-206ENST00000466391 FOXC1Q12948 553 aa12.38□□□□□ -0.43
LSG1-206ENST00000466391 ADAM32Q8TC27 787 aa12.38□□□□□ -0.43
LSG1-206ENST00000466391 TRAK2O60296 914 aa12.37□□□□□ -0.43
LSG1-206ENST00000466391 EFCAB5A4FU69 1503 aa12.37□□□□□ -0.43
LSG1-206ENST00000466391 WNT7AO00755 349 aa12.36□□□□□ -0.43
LSG1-206ENST00000466391 VARSP26640 1264 aaKnown RBP12.36□□□□□ -0.43
LSG1-206ENST00000466391 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
LSG1-206ENST00000466391 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
LSG1-206ENST00000466391 MRGPRX2Q96LB1 330 aa12.35□□□□□ -0.43
LSG1-206ENST00000466391 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
LSG1-206ENST00000466391 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
LSG1-206ENST00000466391 POM121CA8CG34 1229 aa12.34□□□□□ -0.43
LSG1-206ENST00000466391 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
LSG1-206ENST00000466391 CCER1Q8TC90 406 aaPredicted RBP12.34□□□□□ -0.43
LSG1-206ENST00000466391 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
LSG1-206ENST00000466391 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
LSG1-206ENST00000466391 PCDHB9Q9Y5E1 797 aa12.33□□□□□ -0.44
LSG1-206ENST00000466391 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
LSG1-206ENST00000466391 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
LSG1-206ENST00000466391 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
LSG1-206ENST00000466391 C1QTNF2Q9BXJ5 285 aa12.32□□□□□ -0.44
LSG1-206ENST00000466391 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
LSG1-206ENST00000466391 AQRO60306 1485 aaKnown RBP eCLIP12.32□□□□□ -0.44
LSG1-206ENST00000466391 TIAM1Q13009 1591 aa12.31□□□□□ -0.44
LSG1-206ENST00000466391 DZIP3Q86Y13 1208 aaKnown RBP12.31□□□□□ -0.44
LSG1-206ENST00000466391 SLC10A4Q96EP9 437 aa12.31□□□□□ -0.44
LSG1-206ENST00000466391 CFAP43Q8NDM7 1665 aa12.31□□□□□ -0.44
LSG1-206ENST00000466391 TARBP1Q13395 1621 aaKnown RBP12.3□□□□□ -0.44
LSG1-206ENST00000466391 GDF9O60383 454 aa12.3□□□□□ -0.44
LSG1-206ENST00000466391 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
LSG1-206ENST00000466391 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
LSG1-206ENST00000466391 SIAH2O43255 324 aa12.29□□□□□ -0.44
LSG1-206ENST00000466391 SEMA3FQ13275 785 aa12.28□□□□□ -0.44
LSG1-206ENST00000466391 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
LSG1-206ENST00000466391 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
LSG1-206ENST00000466391 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.44
LSG1-206ENST00000466391 TTBK1Q5TCY1 1321 aaPredicted RBP12.27□□□□□ -0.45
LSG1-206ENST00000466391 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.45
LSG1-206ENST00000466391 SOX11P35716 441 aa12.26□□□□□ -0.45
LSG1-206ENST00000466391 CYP4X1Q8N118 509 aa12.26□□□□□ -0.45
LSG1-206ENST00000466391 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
LSG1-206ENST00000466391 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
LSG1-206ENST00000466391 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
LSG1-206ENST00000466391 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
LSG1-206ENST00000466391 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
LSG1-206ENST00000466391 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
LSG1-206ENST00000466391 VASH1Q7L8A9 365 aaPredicted RBP12.25□□□□□ -0.45
LSG1-206ENST00000466391 ZNF592Q92610 1267 aa12.25□□□□□ -0.45
LSG1-206ENST00000466391 TTC24A2A3L6 582 aaPredicted RBP12.24□□□□□ -0.45
LSG1-206ENST00000466391 PCF11O94913 1555 aaKnown RBP12.24□□□□□ -0.45
LSG1-206ENST00000466391 MCCD1P59942 119 aaPredicted RBP12.24□□□□□ -0.45
LSG1-206ENST00000466391 KANK4Q5T7N3 995 aaPredicted RBP12.24□□□□□ -0.45
LSG1-206ENST00000466391 SNIP1Q8TAD8 396 aaKnown RBP12.24□□□□□ -0.45
LSG1-206ENST00000466391 ADAMTS19Q8TE59 1207 aa12.24□□□□□ -0.45
LSG1-206ENST00000466391 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
LSG1-206ENST00000466391 GLMNQ92990 594 aa12.24□□□□□ -0.45
LSG1-206ENST00000466391 ALG2Q9H553 416 aa12.24□□□□□ -0.45
LSG1-206ENST00000466391 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
LSG1-206ENST00000466391 LRRC9Q6ZRR7 1453 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 PRR20EP86478 221 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 PRR20CP86479 221 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 PRR20DP86480 221 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 PRR20BP86481 221 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 PRR20AP86496 221 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 CDK15Q96Q40 435 aa12.23□□□□□ -0.45
LSG1-206ENST00000466391 CDV3Q9UKY7 258 aaKnown RBP12.23□□□□□ -0.45
LSG1-206ENST00000466391 THOC2Q8NI27 1593 aaKnown RBP12.22□□□□□ -0.45
LSG1-206ENST00000466391 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
LSG1-206ENST00000466391 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms