RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
RTFDC1-205ENST00000466260 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
RTFDC1-205ENST00000466260 VPS72Q15906 364 aa13.57□□□□□ -0.24
RTFDC1-205ENST00000466260 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
RTFDC1-205ENST00000466260 COL18A1P39060 1754 aa13.56□□□□□ -0.24
RTFDC1-205ENST00000466260 PUS7Q96PZ0 661 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-205ENST00000466260 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
RTFDC1-205ENST00000466260 NFAT5O94916 1531 aa13.55□□□□□ -0.24
RTFDC1-205ENST00000466260 EVA1CP58658 441 aa13.55□□□□□ -0.24
RTFDC1-205ENST00000466260 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
RTFDC1-205ENST00000466260 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
RTFDC1-205ENST00000466260 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-205ENST00000466260 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
RTFDC1-205ENST00000466260 CPDO75976 1380 aa13.54□□□□□ -0.24
RTFDC1-205ENST00000466260 C1QBPQ07021 282 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-205ENST00000466260 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-205ENST00000466260 SEPT12Q8IYM1 358 aa13.52□□□□□ -0.25
RTFDC1-205ENST00000466260 KCNH5Q8NCM2 988 aa13.52□□□□□ -0.25
RTFDC1-205ENST00000466260 OVOS2A0A0J9YW53 1432 aa13.52□□□□□ -0.25
RTFDC1-205ENST00000466260 OVOS2Q6IE36 1432 aa13.52□□□□□ -0.25
RTFDC1-205ENST00000466260 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 SPATA31A5Q5VU36 1347 aa13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 SPATA31A7Q8IWB4 1347 aa13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
RTFDC1-205ENST00000466260 COG3Q96JB2 828 aa13.5□□□□□ -0.25
RTFDC1-205ENST00000466260 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
RTFDC1-205ENST00000466260 RGPD2P0DJD1 1756 aa13.5□□□□□ -0.25
RTFDC1-205ENST00000466260 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
RTFDC1-205ENST00000466260 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
RTFDC1-205ENST00000466260 SPATA31A1Q5TZJ5 1347 aa13.49□□□□□ -0.25
RTFDC1-205ENST00000466260 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
RTFDC1-205ENST00000466260 UPF1Q92900 1129 aaKnown RBP eCLIP13.49□□□□□ -0.25
RTFDC1-205ENST00000466260 FBLN1P23142 703 aa13.48□□□□□ -0.25
RTFDC1-205ENST00000466260 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
RTFDC1-205ENST00000466260 ARHGEF25Q86VW2 580 aa13.48□□□□□ -0.25
RTFDC1-205ENST00000466260 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
RTFDC1-205ENST00000466260 C11orf95C9JLR9 678 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-205ENST00000466260 FAM182BQ5T319 152 aa13.47□□□□□ -0.25
RTFDC1-205ENST00000466260 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-205ENST00000466260 CRB1P82279 1406 aa13.47□□□□□ -0.25
RTFDC1-205ENST00000466260 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-205ENST00000466260 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
RTFDC1-205ENST00000466260 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-205ENST00000466260 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
RTFDC1-205ENST00000466260 ABCC6O95255 1503 aa13.45□□□□□ -0.26
RTFDC1-205ENST00000466260 FYB1O15117 783 aa13.45□□□□□ -0.26
RTFDC1-205ENST00000466260 CARD14Q9BXL6 1004 aa13.45□□□□□ -0.26
RTFDC1-205ENST00000466260 WDR17Q8IZU2 1322 aa13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 PEAK1Q9H792 1746 aa13.44□□□□□ -0.26
RTFDC1-205ENST00000466260 RGPD1P0DJD0 1748 aa13.43□□□□□ -0.26
RTFDC1-205ENST00000466260 KIF7Q2M1P5 1343 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 CAPN15O75808 1086 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 AMPHP49418 695 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 PANK3Q9H999 370 aa13.42□□□□□ -0.26
RTFDC1-205ENST00000466260 NLRP2Q9NX02 1062 aa13.41□□□□□ -0.26
RTFDC1-205ENST00000466260 TNS1Q9HBL0 1735 aaKnown RBP13.41□□□□□ -0.26
RTFDC1-205ENST00000466260 ERBB3P21860 1342 aa13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 PDE3BQ13370 1112 aa13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
RTFDC1-205ENST00000466260 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-205ENST00000466260 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
RTFDC1-205ENST00000466260 HOXC9P31274 260 aa13.39□□□□□ -0.27
RTFDC1-205ENST00000466260 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-205ENST00000466260 EP400Q96L91 3159 aa13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 PPM1GO15355 546 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 IP6K1Q92551 441 aa13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 CARD10Q9BWT7 1032 aa13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
RTFDC1-205ENST00000466260 CCDC7Q96M83 1385 aa13.37□□□□□ -0.27
RTFDC1-205ENST00000466260 DDB1Q16531 1140 aa13.37□□□□□ -0.27
RTFDC1-205ENST00000466260 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
RTFDC1-205ENST00000466260 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
RTFDC1-205ENST00000466260 DEFB132Q7Z7B7 95 aa13.36□□□□□ -0.27
RTFDC1-205ENST00000466260 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-205ENST00000466260 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-205ENST00000466260 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
RTFDC1-205ENST00000466260 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
RTFDC1-205ENST00000466260 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
RTFDC1-205ENST00000466260 DISP2A7MBM2 1401 aa13.35□□□□□ -0.27
RTFDC1-205ENST00000466260 FLT4P35916 1363 aa13.34□□□□□ -0.27
RTFDC1-205ENST00000466260 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
RTFDC1-205ENST00000466260 TRIM37O94972 964 aa13.34□□□□□ -0.27
RTFDC1-205ENST00000466260 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
RTFDC1-205ENST00000466260 SHANK3Q9BYB0 1731 aa13.33□□□□□ -0.27
RTFDC1-205ENST00000466260 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
RTFDC1-205ENST00000466260 EXOC5O00471 708 aa13.32□□□□□ -0.28
RTFDC1-205ENST00000466260 IL2RBP14784 551 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms