RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CARD14Q9BXL6 1004 aa10.31□□□□□ -0.76
LRCH3-211ENST00000466054 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
LRCH3-211ENST00000466054 KANK3Q6NY19 840 aa10.3□□□□□ -0.76
LRCH3-211ENST00000466054 C1QTNF2Q9BXJ5 285 aa10.3□□□□□ -0.76
LRCH3-211ENST00000466054 FOXK2Q01167 660 aa10.29□□□□□ -0.76
LRCH3-211ENST00000466054 RNFT1Q5M7Z0 435 aa10.29□□□□□ -0.76
LRCH3-211ENST00000466054 SV2AQ7L0J3 742 aa10.29□□□□□ -0.76
LRCH3-211ENST00000466054 SCARF2Q96GP6 870 aaPredicted RBP10.29□□□□□ -0.76
LRCH3-211ENST00000466054 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
LRCH3-211ENST00000466054 VWA5B2Q8N398 1253 aa10.28□□□□□ -0.76
LRCH3-211ENST00000466054 MAP3K10Q02779 954 aa10.27□□□□□ -0.77
LRCH3-211ENST00000466054 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
LRCH3-211ENST00000466054 SPINT1O43278 529 aa10.26□□□□□ -0.77
LRCH3-211ENST00000466054 ITGA6P23229 1130 aa10.26□□□□□ -0.77
LRCH3-211ENST00000466054 CBLBQ13191 982 aa10.26□□□□□ -0.77
LRCH3-211ENST00000466054 PPP1R26Q5T8A7 1209 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-211ENST00000466054 SH3RF1Q7Z6J0 888 aa10.26□□□□□ -0.77
LRCH3-211ENST00000466054 SLURP2P0DP57 97 aa10.25□□□□□ -0.77
LRCH3-211ENST00000466054 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
LRCH3-211ENST00000466054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.25□□□□□ -0.77
LRCH3-211ENST00000466054 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
LRCH3-211ENST00000466054 BCANQ96GW7 911 aa10.25□□□□□ -0.77
LRCH3-211ENST00000466054 SH3BP5LQ7L8J4 393 aa10.24□□□□□ -0.77
LRCH3-211ENST00000466054 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
LRCH3-211ENST00000466054 SLC35F4A4IF30 521 aa10.23□□□□□ -0.77
LRCH3-211ENST00000466054 DHX9Q08211 1270 aaKnown RBP10.23□□□□□ -0.77
LRCH3-211ENST00000466054 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
LRCH3-211ENST00000466054 Q6ZVU0 165 aa10.22□□□□□ -0.77
LRCH3-211ENST00000466054 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
LRCH3-211ENST00000466054 SLC10A4Q96EP9 437 aa10.22□□□□□ -0.77
LRCH3-211ENST00000466054 RELBQ01201 579 aa10.21□□□□□ -0.77
LRCH3-211ENST00000466054 ERFEQ4G0M1 354 aa10.21□□□□□ -0.77
LRCH3-211ENST00000466054 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
LRCH3-211ENST00000466054 ENAMQ9NRM1 1142 aa10.21□□□□□ -0.77
LRCH3-211ENST00000466054 ADAMTS2O95450 1211 aa10.2□□□□□ -0.78
LRCH3-211ENST00000466054 ZMYND10O75800 440 aa10.19□□□□□ -0.78
LRCH3-211ENST00000466054 QPCTQ16769 361 aa10.19□□□□□ -0.78
LRCH3-211ENST00000466054 AGBL1Q96MI9 1066 aa10.19□□□□□ -0.78
LRCH3-211ENST00000466054 INSM2Q96T92 566 aaPredicted RBP10.19□□□□□ -0.78
LRCH3-211ENST00000466054 ARHGAP9Q9BRR9 750 aa10.19□□□□□ -0.78
LRCH3-211ENST00000466054 CDV3Q9UKY7 258 aaKnown RBP10.19□□□□□ -0.78
LRCH3-211ENST00000466054 CTSOP43234 321 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-211ENST00000466054 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
LRCH3-211ENST00000466054 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
LRCH3-211ENST00000466054 LIMD1Q9UGP4 676 aa10.16□□□□□ -0.78
LRCH3-211ENST00000466054 PHF20L1A8MW92 1017 aa10.15□□□□□ -0.78
LRCH3-211ENST00000466054 MSTNO14793 375 aa10.15□□□□□ -0.78
LRCH3-211ENST00000466054 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
LRCH3-211ENST00000466054 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
LRCH3-211ENST00000466054 LILRB3O75022 631 aa10.14□□□□□ -0.79
LRCH3-211ENST00000466054 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
LRCH3-211ENST00000466054 PODNQ7Z5L7 613 aa10.14□□□□□ -0.79
LRCH3-211ENST00000466054 ZNF395Q9H8N7 513 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-211ENST00000466054 RNF217Q8TC41 542 aa10.13□□□□□ -0.79
LRCH3-211ENST00000466054 ZC3H15Q8WU90 426 aaKnown RBP10.13□□□□□ -0.79
LRCH3-211ENST00000466054 TUSC1Q2TAM9 212 aa10.12□□□□□ -0.79
LRCH3-211ENST00000466054 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
LRCH3-211ENST00000466054 GALNT6Q8NCL4 622 aa10.12□□□□□ -0.79
LRCH3-211ENST00000466054 TRIM66O15016 1216 aa10.11□□□□□ -0.79
LRCH3-211ENST00000466054 CELA2BP08218 269 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-211ENST00000466054 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
LRCH3-211ENST00000466054 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
LRCH3-211ENST00000466054 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
LRCH3-211ENST00000466054 NEDD1Q8NHV4 660 aa10.1□□□□□ -0.79
LRCH3-211ENST00000466054 RAB15P59190 212 aa10.09□□□□□ -0.79
LRCH3-211ENST00000466054 XP32Q5T750 250 aa10.09□□□□□ -0.79
LRCH3-211ENST00000466054 BEND7Q8N7W2 519 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-211ENST00000466054 FKBPLQ9UIM3 349 aa10.09□□□□□ -0.79
LRCH3-211ENST00000466054 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
LRCH3-211ENST00000466054 PLA2G4EQ3MJ16 856 aa10.08□□□□□ -0.8
LRCH3-211ENST00000466054 LYSMD3Q7Z3D4 306 aa10.08□□□□□ -0.8
LRCH3-211ENST00000466054 AK7Q96M32 723 aa10.08□□□□□ -0.8
LRCH3-211ENST00000466054 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
LRCH3-211ENST00000466054 ADAM23O75077 832 aa10.07□□□□□ -0.8
LRCH3-211ENST00000466054 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
LRCH3-211ENST00000466054 PTK2Q05397 1052 aa10.07□□□□□ -0.8
LRCH3-211ENST00000466054 ADH1AP07327 375 aa10.06□□□□□ -0.8
LRCH3-211ENST00000466054 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
LRCH3-211ENST00000466054 SPOCK3Q9BQ16 436 aa10.06□□□□□ -0.8
LRCH3-211ENST00000466054 MBIPQ9NS73 344 aa10.06□□□□□ -0.8
LRCH3-211ENST00000466054 CNTNAP5Q8WYK1 1306 aa10.06□□□□□ -0.8
LRCH3-211ENST00000466054 GAS6Q14393 721 aa10.05□□□□□ -0.8
LRCH3-211ENST00000466054 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
LRCH3-211ENST00000466054 RIPOR1Q6ZS17 1223 aa10.04□□□□□ -0.8
LRCH3-211ENST00000466054 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
LRCH3-211ENST00000466054 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
LRCH3-211ENST00000466054 TMPRSS4Q9NRS4 437 aa10.04□□□□□ -0.8
LRCH3-211ENST00000466054 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
LRCH3-211ENST00000466054 FOXD4L5Q5VV16 416 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-211ENST00000466054 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
LRCH3-211ENST00000466054 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
LRCH3-211ENST00000466054 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
LRCH3-211ENST00000466054 CUEDC1Q9NWM3 386 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-211ENST00000466054 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-211ENST00000466054 PTGIRP43119 386 aa10.02□□□□□ -0.81
LRCH3-211ENST00000466054 PNMA1Q8ND90 353 aa10.02□□□□□ -0.81
LRCH3-211ENST00000466054 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
LRCH3-211ENST00000466054 IGF1RP08069 1367 aa10.01□□□□□ -0.81
LRCH3-211ENST00000466054 GPR25O00155 361 aa10.01□□□□□ -0.81
LRCH3-211ENST00000466054 BCRP11274 1271 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms