RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 PDE4CQ08493 712 aa9.56□□□□□ -0.88
TPM3-214ENST00000466010 TMEM259Q4ZIN3 620 aa9.56□□□□□ -0.88
TPM3-214ENST00000466010 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
TPM3-214ENST00000466010 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
TPM3-214ENST00000466010 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
TPM3-214ENST00000466010 E9PCH4 1651 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
TPM3-214ENST00000466010 KCNA6P17658 529 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 TMEM92Q6UXU6 159 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 METTL3Q86U44 580 aaKnown RBP9.55□□□□□ -0.88
TPM3-214ENST00000466010 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 RBM33Q96EV2 1170 aaKnown RBP9.55□□□□□ -0.88
TPM3-214ENST00000466010 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 NAIPQ13075 1403 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 RIMS2Q9UQ26 1411 aa9.55□□□□□ -0.88
TPM3-214ENST00000466010 PIK3R4Q99570 1358 aa9.54□□□□□ -0.88
TPM3-214ENST00000466010 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
TPM3-214ENST00000466010 RFC5P40937 340 aa9.54□□□□□ -0.88
TPM3-214ENST00000466010 TYW1BQ6NUM6 668 aa9.54□□□□□ -0.88
TPM3-214ENST00000466010 PIP4K2BP78356 416 aa9.53□□□□□ -0.88
TPM3-214ENST00000466010 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
TPM3-214ENST00000466010 FBXW7Q969H0 707 aa9.53□□□□□ -0.88
TPM3-214ENST00000466010 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
TPM3-214ENST00000466010 DIP2AQ14689 1571 aa9.53□□□□□ -0.88
TPM3-214ENST00000466010 DISP3Q9P2K9 1392 aa9.52□□□□□ -0.88
TPM3-214ENST00000466010 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
TPM3-214ENST00000466010 SLC34A2O95436 690 aa9.52□□□□□ -0.89
TPM3-214ENST00000466010 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
TPM3-214ENST00000466010 SLC26A8Q96RN1 970 aa9.52□□□□□ -0.89
TPM3-214ENST00000466010 NCOA3Q9Y6Q9 1424 aa9.52□□□□□ -0.89
TPM3-214ENST00000466010 TMCO4Q5TGY1 634 aa9.51□□□□□ -0.89
TPM3-214ENST00000466010 TBC1D2Q9BYX2 928 aa9.51□□□□□ -0.89
TPM3-214ENST00000466010 TRPM2O94759 1503 aa9.51□□□□□ -0.89
TPM3-214ENST00000466010 SPHKAPQ2M3C7 1700 aa9.51□□□□□ -0.89
TPM3-214ENST00000466010 MSH6P52701 1360 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 TMEM94Q12767 1356 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
TPM3-214ENST00000466010 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
TPM3-214ENST00000466010 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
TPM3-214ENST00000466010 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
TPM3-214ENST00000466010 SEC24BO95487 1268 aa9.49□□□□□ -0.89
TPM3-214ENST00000466010 HSPA1LP34931 641 aa9.49□□□□□ -0.89
TPM3-214ENST00000466010 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
TPM3-214ENST00000466010 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
TPM3-214ENST00000466010 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
TPM3-214ENST00000466010 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
TPM3-214ENST00000466010 SOCS7O14512 581 aa9.48□□□□□ -0.89
TPM3-214ENST00000466010 ZNF326Q5BKZ1 582 aaKnown RBP9.48□□□□□ -0.89
TPM3-214ENST00000466010 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
TPM3-214ENST00000466010 ADGRG1Q9Y653 693 aa9.48□□□□□ -0.89
TPM3-214ENST00000466010 RPGRIP1LQ68CZ1 1315 aa9.48□□□□□ -0.89
TPM3-214ENST00000466010 ALKQ9UM73 1620 aa9.47□□□□□ -0.89
TPM3-214ENST00000466010 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
TPM3-214ENST00000466010 C3orf67Q6ZVT6 689 aa9.47□□□□□ -0.89
TPM3-214ENST00000466010 ADAMTS13Q76LX8 1427 aa9.47□□□□□ -0.89
TPM3-214ENST00000466010 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.89
TPM3-214ENST00000466010 FAM161AQ3B820 660 aa9.46□□□□□ -0.9
TPM3-214ENST00000466010 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
TPM3-214ENST00000466010 NLRP7Q8WX94 980 aa9.46□□□□□ -0.9
TPM3-214ENST00000466010 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
TPM3-214ENST00000466010 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.9
TPM3-214ENST00000466010 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
TPM3-214ENST00000466010 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
TPM3-214ENST00000466010 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
TPM3-214ENST00000466010 C19orf44Q9H6X5 657 aa9.45□□□□□ -0.9
TPM3-214ENST00000466010 SLAIN2Q9P270 581 aa9.44□□□□□ -0.9
TPM3-214ENST00000466010 DCCP43146 1447 aa9.44□□□□□ -0.9
TPM3-214ENST00000466010 XIRP1Q702N8 1843 aaKnown RBP9.44□□□□□ -0.9
TPM3-214ENST00000466010 KIF1BO60333 1816 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 CLTCL1P53675 1640 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 CCDC144AA2RUR9 1427 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 ATF3P18847 181 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 ABL2P42684 1182 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
TPM3-214ENST00000466010 MTMR14Q8NCE2 650 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
TPM3-214ENST00000466010 LIMD1Q9UGP4 676 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 AMOTL2Q9Y2J4 779 aa9.43□□□□□ -0.9
TPM3-214ENST00000466010 NEXMIFQ5QGS0 1516 aa9.42□□□□□ -0.9
TPM3-214ENST00000466010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
TPM3-214ENST00000466010 GLMNQ92990 594 aa9.42□□□□□ -0.9
TPM3-214ENST00000466010 MED1Q15648 1581 aaPredicted RBP9.41□□□□□ -0.9
TPM3-214ENST00000466010 SETD5Q9C0A6 1442 aa9.41□□□□□ -0.9
TPM3-214ENST00000466010 ANKRD30BQ9BXX2 1392 aa9.41□□□□□ -0.9
TPM3-214ENST00000466010 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
TPM3-214ENST00000466010 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
TPM3-214ENST00000466010 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
TPM3-214ENST00000466010 MPHOSPH9Q99550 1183 aa9.41□□□□□ -0.9
TPM3-214ENST00000466010 ROBO1Q9Y6N7 1651 aa9.4□□□□□ -0.9
TPM3-214ENST00000466010 SPTLC1O15269 473 aa9.4□□□□□ -0.9
TPM3-214ENST00000466010 IRF5Q13568 498 aa9.4□□□□□ -0.9
TPM3-214ENST00000466010 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
TPM3-214ENST00000466010 SPIRE2Q8WWL2 714 aa9.4□□□□□ -0.9
TPM3-214ENST00000466010 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
TPM3-214ENST00000466010 PRAG1Q86YV5 1406 aa9.39□□□□□ -0.91
TPM3-214ENST00000466010 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
TPM3-214ENST00000466010 NRXN3Q9Y4C0 1643 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms