RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 LTN1O94822 1766 aa19.87■□□□□ 0.77
HLA-F-223ENST00000465459 HOXC9P31274 260 aa19.86■□□□□ 0.77
HLA-F-223ENST00000465459 MTHFSP49914 203 aa19.86■□□□□ 0.77
HLA-F-223ENST00000465459 C8orf37Q96NL8 207 aa19.86■□□□□ 0.77
HLA-F-223ENST00000465459 SLIT2O94813 1529 aa19.86■□□□□ 0.77
HLA-F-223ENST00000465459 COL18A1P39060 1754 aa19.85■□□□□ 0.77
HLA-F-223ENST00000465459 INSRP06213 1382 aa19.85■□□□□ 0.77
HLA-F-223ENST00000465459 LMO7Q8WWI1 1683 aa19.85■□□□□ 0.77
HLA-F-223ENST00000465459 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
HLA-F-223ENST00000465459 CDK12Q9NYV4 1490 aaPredicted RBP19.85■□□□□ 0.77
HLA-F-223ENST00000465459 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
HLA-F-223ENST00000465459 NWD2Q9ULI1 1742 aa19.83■□□□□ 0.77
HLA-F-223ENST00000465459 BTG4Q9NY30 223 aa19.83■□□□□ 0.77
HLA-F-223ENST00000465459 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
HLA-F-223ENST00000465459 CAMTA1Q9Y6Y1 1673 aa19.83■□□□□ 0.76
HLA-F-223ENST00000465459 CFAP53Q96M91 514 aa19.82■□□□□ 0.76
HLA-F-223ENST00000465459 PEAK1Q9H792 1746 aa19.82■□□□□ 0.76
HLA-F-223ENST00000465459 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
HLA-F-223ENST00000465459 UNC5CLQ8IV45 518 aa19.81■□□□□ 0.76
HLA-F-223ENST00000465459 PLCH1Q4KWH8 1693 aa19.81■□□□□ 0.76
HLA-F-223ENST00000465459 AFF2P51816 1311 aa19.8■□□□□ 0.76
HLA-F-223ENST00000465459 EVA1CP58658 441 aa19.8■□□□□ 0.76
HLA-F-223ENST00000465459 COL5A2P05997 1499 aaPredicted RBP19.79■□□□□ 0.76
HLA-F-223ENST00000465459 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
HLA-F-223ENST00000465459 ERBB3P21860 1342 aa19.79■□□□□ 0.76
HLA-F-223ENST00000465459 USP21Q9UK80 565 aa19.79■□□□□ 0.76
HLA-F-223ENST00000465459 WDR17Q8IZU2 1322 aa19.78■□□□□ 0.76
HLA-F-223ENST00000465459 ZNF772Q68DY9 489 aaPredicted RBP19.78■□□□□ 0.76
HLA-F-223ENST00000465459 ANKRD24Q8TF21 1146 aa19.78■□□□□ 0.76
HLA-F-223ENST00000465459 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.77■□□□□ 0.76
HLA-F-223ENST00000465459 VPS72Q15906 364 aa19.76■□□□□ 0.75
HLA-F-223ENST00000465459 NRAPQ86VF7 1730 aa19.76■□□□□ 0.75
HLA-F-223ENST00000465459 DIAPH1O60610 1272 aaKnown RBP19.75■□□□□ 0.75
HLA-F-223ENST00000465459 CSB-PGBD3P0DP91 1061 aa19.75■□□□□ 0.75
HLA-F-223ENST00000465459 EIF4A2Q14240 407 aaKnown RBP19.75■□□□□ 0.75
HLA-F-223ENST00000465459 STRN4Q9NRL3 753 aa19.75■□□□□ 0.75
HLA-F-223ENST00000465459 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
HLA-F-223ENST00000465459 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
HLA-F-223ENST00000465459 TRPC5Q9UL62 973 aaPredicted RBP19.74■□□□□ 0.75
HLA-F-223ENST00000465459 CRB1P82279 1406 aa19.74■□□□□ 0.75
HLA-F-223ENST00000465459 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
HLA-F-223ENST00000465459 IL13P35225 146 aa19.73■□□□□ 0.75
HLA-F-223ENST00000465459 LARP1Q6PKG0 1096 aaKnown RBP19.73■□□□□ 0.75
HLA-F-223ENST00000465459 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
HLA-F-223ENST00000465459 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
HLA-F-223ENST00000465459 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
HLA-F-223ENST00000465459 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
HLA-F-223ENST00000465459 ATRNO75882 1429 aa19.72■□□□□ 0.75
HLA-F-223ENST00000465459 TOM1L2Q6ZVM7 507 aa19.72■□□□□ 0.75
HLA-F-223ENST00000465459 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
HLA-F-223ENST00000465459 SPATA31A5Q5VU36 1347 aa19.71■□□□□ 0.75
HLA-F-223ENST00000465459 SPATA31A7Q8IWB4 1347 aa19.71■□□□□ 0.75
HLA-F-223ENST00000465459 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
HLA-F-223ENST00000465459 QTRT2Q9H974 415 aaKnown RBP19.7■□□□□ 0.74
HLA-F-223ENST00000465459 THRAP3Q9Y2W1 955 aaKnown RBP19.7■□□□□ 0.74
HLA-F-223ENST00000465459 SPATA31A1Q5TZJ5 1347 aa19.7■□□□□ 0.74
HLA-F-223ENST00000465459 EYA1Q99502 592 aa19.69■□□□□ 0.74
HLA-F-223ENST00000465459 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
HLA-F-223ENST00000465459 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
HLA-F-223ENST00000465459 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
HLA-F-223ENST00000465459 GJD4Q96KN9 370 aaPredicted RBP19.68■□□□□ 0.74
HLA-F-223ENST00000465459 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
HLA-F-223ENST00000465459 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
HLA-F-223ENST00000465459 TCP11L2Q8N4U5 519 aa19.67■□□□□ 0.74
HLA-F-223ENST00000465459 RGS17Q9UGC6 210 aaPredicted RBP19.67■□□□□ 0.74
HLA-F-223ENST00000465459 BARGINQ6ZT62 677 aa19.66■□□□□ 0.74
HLA-F-223ENST00000465459 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
HLA-F-223ENST00000465459 RBM6P78332 1123 aaKnown RBP19.65■□□□□ 0.74
HLA-F-223ENST00000465459 MIER1Q8N108 512 aa19.65■□□□□ 0.74
HLA-F-223ENST00000465459 CDCA7Q9BWT1 371 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-223ENST00000465459 PLEKHG2Q9H7P9 1386 aa19.65■□□□□ 0.74
HLA-F-223ENST00000465459 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
HLA-F-223ENST00000465459 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
HLA-F-223ENST00000465459 KDRP35968 1356 aa19.64■□□□□ 0.73
HLA-F-223ENST00000465459 ONECUT3O60422 494 aaPredicted RBP19.63■□□□□ 0.73
HLA-F-223ENST00000465459 U2AF1L5P0DN76 240 aaPredicted RBP19.62■□□□□ 0.73
HLA-F-223ENST00000465459 U2AF1Q01081 240 aaKnown RBP eCLIP19.62■□□□□ 0.73
HLA-F-223ENST00000465459 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
HLA-F-223ENST00000465459 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
HLA-F-223ENST00000465459 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
HLA-F-223ENST00000465459 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
HLA-F-223ENST00000465459 FCHSD2O94868 740 aa19.61■□□□□ 0.73
HLA-F-223ENST00000465459 RXRBP28702 533 aa19.61■□□□□ 0.73
HLA-F-223ENST00000465459 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
HLA-F-223ENST00000465459 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
HLA-F-223ENST00000465459 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
HLA-F-223ENST00000465459 GLI3P10071 1580 aa19.61■□□□□ 0.73
HLA-F-223ENST00000465459 IL2RBP14784 551 aa19.6■□□□□ 0.73
HLA-F-223ENST00000465459 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
HLA-F-223ENST00000465459 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
HLA-F-223ENST00000465459 PNISRQ8TF01 805 aaKnown RBP19.6■□□□□ 0.73
HLA-F-223ENST00000465459 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
HLA-F-223ENST00000465459 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
HLA-F-223ENST00000465459 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.72
HLA-F-223ENST00000465459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.72
HLA-F-223ENST00000465459 HMOX1P09601 288 aa19.57■□□□□ 0.72
HLA-F-223ENST00000465459 AEBP1Q8IUX7 1158 aa19.57■□□□□ 0.72
HLA-F-223ENST00000465459 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
HLA-F-223ENST00000465459 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
HLA-F-223ENST00000465459 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms