RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 KIF20BQ96Q89 1820 aa18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 CAMTA1Q9Y6Y1 1673 aa18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
TSPAN1-202ENST00000464786 SPATA31A5Q5VU36 1347 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 SPATA31A7Q8IWB4 1347 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 ABCC6O95255 1503 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 FBLN1P23142 703 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
TSPAN1-202ENST00000464786 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
TSPAN1-202ENST00000464786 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
TSPAN1-202ENST00000464786 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
TSPAN1-202ENST00000464786 THRAP3Q9Y2W1 955 aaKnown RBP18.24■□□□□ 0.51
TSPAN1-202ENST00000464786 WDR17Q8IZU2 1322 aa18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 CDK12Q9NYV4 1490 aaPredicted RBP18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 HOXC9P31274 260 aa18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
TSPAN1-202ENST00000464786 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 COL5A2P05997 1499 aaPredicted RBP18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 TCP11L2Q8N4U5 519 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 COL18A1P39060 1754 aa18.22■□□□□ 0.51
TSPAN1-202ENST00000464786 BARGINQ6ZT62 677 aa18.21■□□□□ 0.51
TSPAN1-202ENST00000464786 ERBB3P21860 1342 aa18.21■□□□□ 0.51
TSPAN1-202ENST00000464786 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
TSPAN1-202ENST00000464786 NLRP2Q9NX02 1062 aa18.2■□□□□ 0.5
TSPAN1-202ENST00000464786 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
TSPAN1-202ENST00000464786 CRB1P82279 1406 aa18.2■□□□□ 0.5
TSPAN1-202ENST00000464786 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
TSPAN1-202ENST00000464786 FLT4P35916 1363 aa18.19■□□□□ 0.5
TSPAN1-202ENST00000464786 FAM98CQ17RN3 349 aaKnown RBP18.19■□□□□ 0.5
TSPAN1-202ENST00000464786 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
TSPAN1-202ENST00000464786 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
TSPAN1-202ENST00000464786 INSRP06213 1382 aa18.18■□□□□ 0.5
TSPAN1-202ENST00000464786 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
TSPAN1-202ENST00000464786 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
TSPAN1-202ENST00000464786 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
TSPAN1-202ENST00000464786 LTN1O94822 1766 aa18.17■□□□□ 0.5
TSPAN1-202ENST00000464786 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
TSPAN1-202ENST00000464786 A0A0G2JS52 829 aa18.16■□□□□ 0.5
TSPAN1-202ENST00000464786 MYT1Q01538 1121 aa18.16■□□□□ 0.5
TSPAN1-202ENST00000464786 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
TSPAN1-202ENST00000464786 GLI3P10071 1580 aa18.15■□□□□ 0.5
TSPAN1-202ENST00000464786 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.5
TSPAN1-202ENST00000464786 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
TSPAN1-202ENST00000464786 RGPD5Q99666 1765 aa18.13■□□□□ 0.49
TSPAN1-202ENST00000464786 MTHFSP49914 203 aa18.13■□□□□ 0.49
TSPAN1-202ENST00000464786 RGS12O14924 1447 aa18.13■□□□□ 0.49
TSPAN1-202ENST00000464786 PDE3BQ13370 1112 aa18.11■□□□□ 0.49
TSPAN1-202ENST00000464786 KRT27Q7Z3Y8 459 aa18.11■□□□□ 0.49
TSPAN1-202ENST00000464786 EXOC5O00471 708 aa18.1■□□□□ 0.49
TSPAN1-202ENST00000464786 RALBP1Q15311 655 aa18.1■□□□□ 0.49
TSPAN1-202ENST00000464786 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
TSPAN1-202ENST00000464786 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
TSPAN1-202ENST00000464786 IL2RBP14784 551 aa18.09■□□□□ 0.49
TSPAN1-202ENST00000464786 DDB1Q16531 1140 aa18.09■□□□□ 0.49
TSPAN1-202ENST00000464786 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
TSPAN1-202ENST00000464786 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
TSPAN1-202ENST00000464786 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
TSPAN1-202ENST00000464786 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
TSPAN1-202ENST00000464786 RAPGEF4Q8WZA2 1011 aa18.06■□□□□ 0.48
TSPAN1-202ENST00000464786 EYA1Q99502 592 aa18.06■□□□□ 0.48
TSPAN1-202ENST00000464786 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
TSPAN1-202ENST00000464786 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
TSPAN1-202ENST00000464786 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
TSPAN1-202ENST00000464786 IL13P35225 146 aa18.04■□□□□ 0.48
TSPAN1-202ENST00000464786 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
TSPAN1-202ENST00000464786 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
TSPAN1-202ENST00000464786 CCDC125Q86Z20 511 aa18.03■□□□□ 0.48
TSPAN1-202ENST00000464786 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
TSPAN1-202ENST00000464786 THSD7AQ9UPZ6 1657 aa18.03■□□□□ 0.48
TSPAN1-202ENST00000464786 USHBP1Q8N6Y0 703 aa18.02■□□□□ 0.48
TSPAN1-202ENST00000464786 ZCRB1Q8TBF4 217 aaKnown RBP18.01■□□□□ 0.47
TSPAN1-202ENST00000464786 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
TSPAN1-202ENST00000464786 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
TSPAN1-202ENST00000464786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.47
TSPAN1-202ENST00000464786 NCAPD2Q15021 1401 aa17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 MARCH10Q8NA82 808 aaPredicted RBP17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 UPF1Q92900 1129 aaKnown RBP eCLIP17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
TSPAN1-202ENST00000464786 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
TSPAN1-202ENST00000464786 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
TSPAN1-202ENST00000464786 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
TSPAN1-202ENST00000464786 OVOS2A0A0G2JMS6 1433 aa17.96■□□□□ 0.47
TSPAN1-202ENST00000464786 RGPD2P0DJD1 1756 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms