RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 RTL1A6NKG5 1358 aa17.09■□□□□ 0.33
SUPT20H-204ENST00000464572 CPDO75976 1380 aa17.09■□□□□ 0.33
SUPT20H-204ENST00000464572 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.33
SUPT20H-204ENST00000464572 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.33
SUPT20H-204ENST00000464572 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.33
SUPT20H-204ENST00000464572 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
SUPT20H-204ENST00000464572 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
SUPT20H-204ENST00000464572 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
SUPT20H-204ENST00000464572 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
SUPT20H-204ENST00000464572 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
SUPT20H-204ENST00000464572 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
SUPT20H-204ENST00000464572 IL13P35225 146 aa17.06■□□□□ 0.32
SUPT20H-204ENST00000464572 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
SUPT20H-204ENST00000464572 ADAMTS2O95450 1211 aa17.05■□□□□ 0.32
SUPT20H-204ENST00000464572 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
SUPT20H-204ENST00000464572 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
SUPT20H-204ENST00000464572 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
SUPT20H-204ENST00000464572 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
SUPT20H-204ENST00000464572 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
SUPT20H-204ENST00000464572 BLMP54132 1417 aaPredicted RBP17.03■□□□□ 0.32
SUPT20H-204ENST00000464572 COL18A1P39060 1754 aa17.03■□□□□ 0.32
SUPT20H-204ENST00000464572 SPATA31A6Q5VVP1 1343 aa17.03■□□□□ 0.32
SUPT20H-204ENST00000464572 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
SUPT20H-204ENST00000464572 ANKRD24Q8TF21 1146 aa17.02■□□□□ 0.31
SUPT20H-204ENST00000464572 ABCC6O95255 1503 aa17■□□□□ 0.31
SUPT20H-204ENST00000464572 ERBB3P21860 1342 aa17■□□□□ 0.31
SUPT20H-204ENST00000464572 EYA1Q99502 592 aa17■□□□□ 0.31
SUPT20H-204ENST00000464572 CAMTA1Q9Y6Y1 1673 aa17■□□□□ 0.31
SUPT20H-204ENST00000464572 HMOX1P09601 288 aa16.99■□□□□ 0.31
SUPT20H-204ENST00000464572 BTG4Q9NY30 223 aa16.99■□□□□ 0.31
SUPT20H-204ENST00000464572 LMO7Q8WWI1 1683 aa16.99■□□□□ 0.31
SUPT20H-204ENST00000464572 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
SUPT20H-204ENST00000464572 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
SUPT20H-204ENST00000464572 NBPF6Q5VWK0 638 aa16.98■□□□□ 0.31
SUPT20H-204ENST00000464572 NBPF4Q96M43 638 aa16.98■□□□□ 0.31
SUPT20H-204ENST00000464572 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 LRP6O75581 1613 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 COL14A1Q05707 1796 aaKnown RBP16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 IGSF1Q8N6C5 1336 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 EVA1CP58658 441 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
SUPT20H-204ENST00000464572 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
SUPT20H-204ENST00000464572 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
SUPT20H-204ENST00000464572 COL5A2P05997 1499 aaPredicted RBP16.96■□□□□ 0.31
SUPT20H-204ENST00000464572 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
SUPT20H-204ENST00000464572 FCHSD2O94868 740 aa16.96■□□□□ 0.3
SUPT20H-204ENST00000464572 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.3
SUPT20H-204ENST00000464572 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
SUPT20H-204ENST00000464572 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
SUPT20H-204ENST00000464572 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
SUPT20H-204ENST00000464572 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
SUPT20H-204ENST00000464572 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
SUPT20H-204ENST00000464572 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
SUPT20H-204ENST00000464572 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
SUPT20H-204ENST00000464572 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
SUPT20H-204ENST00000464572 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
SUPT20H-204ENST00000464572 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
SUPT20H-204ENST00000464572 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
SUPT20H-204ENST00000464572 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
SUPT20H-204ENST00000464572 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
SUPT20H-204ENST00000464572 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
SUPT20H-204ENST00000464572 KDRP35968 1356 aa16.92■□□□□ 0.3
SUPT20H-204ENST00000464572 SLIT2O94813 1529 aa16.91■□□□□ 0.3
SUPT20H-204ENST00000464572 APAF1O14727 1248 aa16.9■□□□□ 0.3
SUPT20H-204ENST00000464572 NEFMP07197 916 aa16.9■□□□□ 0.3
SUPT20H-204ENST00000464572 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
SUPT20H-204ENST00000464572 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
SUPT20H-204ENST00000464572 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
SUPT20H-204ENST00000464572 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
SUPT20H-204ENST00000464572 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
SUPT20H-204ENST00000464572 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
SUPT20H-204ENST00000464572 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
SUPT20H-204ENST00000464572 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
SUPT20H-204ENST00000464572 CRB1P82279 1406 aa16.88■□□□□ 0.29
SUPT20H-204ENST00000464572 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
SUPT20H-204ENST00000464572 UNC5CLQ8IV45 518 aa16.88■□□□□ 0.29
SUPT20H-204ENST00000464572 NWD2Q9ULI1 1742 aa16.88■□□□□ 0.29
SUPT20H-204ENST00000464572 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
SUPT20H-204ENST00000464572 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
SUPT20H-204ENST00000464572 BCL9LQ86UU0 1499 aa16.87■□□□□ 0.29
SUPT20H-204ENST00000464572 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
SUPT20H-204ENST00000464572 USP21Q9UK80 565 aa16.86■□□□□ 0.29
SUPT20H-204ENST00000464572 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
SUPT20H-204ENST00000464572 AFF2P51816 1311 aa16.85■□□□□ 0.29
SUPT20H-204ENST00000464572 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
SUPT20H-204ENST00000464572 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
SUPT20H-204ENST00000464572 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.28
SUPT20H-204ENST00000464572 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
SUPT20H-204ENST00000464572 NFE2L2Q16236 605 aa16.83■□□□□ 0.28
SUPT20H-204ENST00000464572 SPATA31A1Q5TZJ5 1347 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 MEGF6O75095 1541 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 SPATA31A5Q5VU36 1347 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 SPATA31A7Q8IWB4 1347 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 IL2RBP14784 551 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 RIPK4P57078 832 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 VPS72Q15906 364 aa16.82■□□□□ 0.28
SUPT20H-204ENST00000464572 PLEKHO1Q53GL0 409 aaPredicted RBP16.81■□□□□ 0.28
SUPT20H-204ENST00000464572 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms