RNA–Protein interactions for RNA: ENST00000464534.3

RN7SL55P-201, Transcript of RNA, 7SL, cytoplasmic 55, pseudogene, humanhuman

BASIC

Gene RN7SL55P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL55P-201ENST00000464534 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 FLT4P35916 1363 aa10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 PRKRIP1Q9H875 184 aaPredicted RBP10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 MYBBP1AQ9BQG0 1328 aaKnown RBP10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 SLIT3O75094 1523 aa10.28□□□□□ -0.76
RN7SL55P-201ENST00000464534 NRKQ7Z2Y5 1582 aa10.27□□□□□ -0.76
RN7SL55P-201ENST00000464534 RXRBP28702 533 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 PPP2R1AP30153 589 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 VPS72Q15906 364 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 ANKRD24Q8TF21 1146 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 NLRP2Q9NX02 1062 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 KIF20BQ96Q89 1820 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 PIK3C2AO00443 1686 aa10.27□□□□□ -0.77
RN7SL55P-201ENST00000464534 INSRP06213 1382 aa10.26□□□□□ -0.77
RN7SL55P-201ENST00000464534 RBM6P78332 1123 aaKnown RBP10.26□□□□□ -0.77
RN7SL55P-201ENST00000464534 LTV1Q96GA3 475 aaPredicted RBP10.26□□□□□ -0.77
RN7SL55P-201ENST00000464534 CARD10Q9BWT7 1032 aa10.26□□□□□ -0.77
RN7SL55P-201ENST00000464534 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
RN7SL55P-201ENST00000464534 COL14A1Q05707 1796 aaKnown RBP10.25□□□□□ -0.77
RN7SL55P-201ENST00000464534 HSP90AB2PQ58FF8 381 aa10.25□□□□□ -0.77
RN7SL55P-201ENST00000464534 GJD4Q96KN9 370 aaPredicted RBP10.25□□□□□ -0.77
RN7SL55P-201ENST00000464534 WDR17Q8IZU2 1322 aa10.25□□□□□ -0.77
RN7SL55P-201ENST00000464534 ABCC6O95255 1503 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 A0A0G2JS52 829 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 FBLN1P23142 703 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 MYT1Q01538 1121 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 RAPGEF4Q8WZA2 1011 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 AXIN2Q9Y2T1 843 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
RN7SL55P-201ENST00000464534 EXOC5O00471 708 aa10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 U2SURPO15042 1029 aaKnown RBP10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 BARGINQ6ZT62 677 aa10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 USP35Q9P2H5 1018 aa10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 ERBB3P21860 1342 aa10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 SLIT2O94813 1529 aa10.23□□□□□ -0.77
RN7SL55P-201ENST00000464534 PHRF1Q9P1Y6 1649 aaKnown RBP10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 ANKRD26Q9UPS8 1709 aa10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 PDE3BQ13370 1112 aa10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 SPATA31A5Q5VU36 1347 aa10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 SPATA31A7Q8IWB4 1347 aa10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 CRB1P82279 1406 aa10.22□□□□□ -0.77
RN7SL55P-201ENST00000464534 IL2RBP14784 551 aa10.21□□□□□ -0.77
RN7SL55P-201ENST00000464534 EIF4A2Q14240 407 aaKnown RBP10.21□□□□□ -0.77
RN7SL55P-201ENST00000464534 AMOTQ4VCS5 1084 aa10.21□□□□□ -0.77
RN7SL55P-201ENST00000464534 SPG7Q9UQ90 795 aa10.21□□□□□ -0.77
RN7SL55P-201ENST00000464534 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.78
RN7SL55P-201ENST00000464534 NFAT5O94916 1531 aa10.21□□□□□ -0.78
RN7SL55P-201ENST00000464534 LRP6O75581 1613 aa10.21□□□□□ -0.78
RN7SL55P-201ENST00000464534 MARF1Q9Y4F3 1742 aaKnown RBP10.21□□□□□ -0.78
RN7SL55P-201ENST00000464534 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 FCHSD2O94868 740 aa10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 MAP2P11137 1827 aaKnown RBP10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 IL13P35225 146 aa10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 PLEKHO1Q53GL0 409 aaPredicted RBP10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 BCL9LQ86UU0 1499 aa10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 NWD2Q9ULI1 1742 aa10.2□□□□□ -0.78
RN7SL55P-201ENST00000464534 COL5A2P05997 1499 aaPredicted RBP10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 CDK12Q9NYV4 1490 aaPredicted RBP10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 ONECUT3O60422 494 aaPredicted RBP10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 DDB1Q16531 1140 aa10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 NBPF6Q5VWK0 638 aa10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 NBPF4Q96M43 638 aa10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 EYA1Q99502 592 aa10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.19□□□□□ -0.78
RN7SL55P-201ENST00000464534 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 HSP90AB1P08238 724 aaKnown RBP10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 SULT6B1Q6IMI4 303 aa10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 CRYBG1Q9Y4K1 1723 aa10.18□□□□□ -0.78
RN7SL55P-201ENST00000464534 ATRNO75882 1429 aa10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 LTN1O94822 1766 aa10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
RN7SL55P-201ENST00000464534 MAPK8IP3Q9UPT6 1336 aa10.16□□□□□ -0.78
RN7SL55P-201ENST00000464534 C1orf141Q5JVX7 400 aa10.16□□□□□ -0.78
RN7SL55P-201ENST00000464534 POTEAQ6S8J7 498 aa10.16□□□□□ -0.78
RN7SL55P-201ENST00000464534 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
RN7SL55P-201ENST00000464534 IGSF1Q8N6C5 1336 aa10.15□□□□□ -0.78
RN7SL55P-201ENST00000464534 KRT27Q7Z3Y8 459 aa10.15□□□□□ -0.78
RN7SL55P-201ENST00000464534 IFNL2Q8IZJ0 200 aa10.15□□□□□ -0.78
RN7SL55P-201ENST00000464534 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
RN7SL55P-201ENST00000464534 RGS17Q9UGC6 210 aaPredicted RBP10.15□□□□□ -0.78
RN7SL55P-201ENST00000464534 COL18A1P39060 1754 aa10.14□□□□□ -0.79
RN7SL55P-201ENST00000464534 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.14□□□□□ -0.79
RN7SL55P-201ENST00000464534 HMOX1P09601 288 aa10.14□□□□□ -0.79
RN7SL55P-201ENST00000464534 FAM196AQ6ZSG2 479 aa10.14□□□□□ -0.79
RN7SL55P-201ENST00000464534 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms