RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 USP17L4A6NCW7 530 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 RNF20Q5VTR2 975 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 USP17L2Q6R6M4 530 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 USP17L1Q7RTZ2 530 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 TRMT44Q8IYL2 757 aaKnown RBP6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 RETREG2Q8NC44 543 aa6.8□□□□□ -1.32
HMGXB4-205ENST00000464480 LZTS3O60299 673 aaPredicted RBP6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 CD2BP2O95400 341 aaKnown RBP6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 CSB-PGBD3P0DP91 1061 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 VARSP26640 1264 aaKnown RBP6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 SLC19A1P41440 591 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 MAP7D1Q3KQU3 841 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 PLPP7Q8NBV4 271 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 VRTNQ9H8Y1 702 aa6.79□□□□□ -1.32
HMGXB4-205ENST00000464480 SRPK2P78362 688 aaKnown RBP6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 EML3Q32P44 896 aa6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 DOLKQ9UPQ8 538 aa6.78□□□□□ -1.32
HMGXB4-205ENST00000464480 ATG7O95352 703 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 SKOR1P84550 965 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 NCOA4Q13772 614 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 SEPT12Q8IYM1 358 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 CHIC2Q9UKJ5 165 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 USTQ9Y2C2 406 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 MAP4K5Q9Y4K4 846 aa6.77□□□□□ -1.33
HMGXB4-205ENST00000464480 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
HMGXB4-205ENST00000464480 DEPDC4Q8N2C3 294 aa6.76□□□□□ -1.33
HMGXB4-205ENST00000464480 ESPNB1AK53 854 aa6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 GIGYF1O75420 1035 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 KANK4Q5T7N3 995 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 TRAF7Q6Q0C0 670 aa6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 VASH1Q7L8A9 365 aaPredicted RBP6.75□□□□□ -1.33
HMGXB4-205ENST00000464480 FAM196BA6NMK8 535 aa6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 ATP1A2P50993 1020 aa6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 RC3H1Q5TC82 1133 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 LARP1Q6PKG0 1096 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 LIAT1Q6ZQX7 453 aa6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 TRIM50Q86XT4 487 aa6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 TRIM52Q96A61 297 aa6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 KCTD15Q96SI1 283 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 MKRN1Q9UHC7 482 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L15C9J2P7 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L10C9JJH3 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L13C9JLJ4 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L12C9JPN9 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L11C9JVI0 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L21D6R901 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L18D6R9N7 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L22D6RA61 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L17D6RBQ6 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L19D6RCP7 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L20D6RJB6 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 GFRA3O60609 400 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 USP17L24Q0WX57 530 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 ELOAQ14241 798 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 SPRYD7Q5W111 196 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 NOD1Q9Y239 953 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 PCDHB11Q9Y5F2 797 aa6.73□□□□□ -1.33
HMGXB4-205ENST00000464480 RASA1P20936 1047 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 FSHRP23945 695 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 RAB15P59190 212 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 ARID5BQ14865 1188 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 INTS6LQ5JSJ4 861 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 CDK15Q96Q40 435 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
HMGXB4-205ENST00000464480 WNT7AO00755 349 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 NRG2O14511 850 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 DHX9Q08211 1270 aaKnown RBP6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 USP4Q13107 963 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 OGFOD1Q8N543 542 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 MPNDQ8N594 471 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 NOVA2Q9UNW9 492 aaKnown RBP6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 TLL2Q9Y6L7 1015 aa6.71□□□□□ -1.34
HMGXB4-205ENST00000464480 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 GTF2IP78347 998 aa6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 PTK7Q13308 1070 aa6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 TSGA10IPQ3SY00 556 aa6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 CRTC2Q53ET0 693 aaPredicted RBP6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 DNAAF2Q9NVR5 837 aaKnown RBP6.7□□□□□ -1.34
HMGXB4-205ENST00000464480 ADH1CP00326 375 aa6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 Q6ZNB5 142 aa6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 LARGE2Q8N3Y3 721 aa6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 MRGPRX2Q96LB1 330 aa6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 ESF1Q9H501 851 aaKnown RBP6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 ZMIZ1Q9ULJ6 1067 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms